Trachymyrmex cornetzi: 108767403
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Entry
108767403 CDS
T11212
Name
(RefSeq) nucleoporin p54-like
KO
K14308
nuclear pore complex protein Nup54
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108767403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcz03019
]
108767403
Messenger RNA biogenesis [BR:
tcz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108767403
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
108767403
NCBI-ProteinID:
XP_018372791
UniProt:
A0A195DI73
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
MSFGSGFGASTSTPAPTFAFGTTPASTATPVKPVPGFGTPSFGFNTPTTSTPSLFGSPST
QTTGFGTGTGFGTPTATGFGSAPSTGFGAAPTFGTPSTSAFGSAPAFGSTPVSSTTTGFG
TTSTFGSTPASTTGFGGFGTATTSTLSFGGFGGFGTATTTAAPSLFGGFGTPNTASTGFG
TSGFGAFGSKPVTTSGTFGGFGTGTGFTGFGIGLAQPQQQQQQQQQQPTNTASEALYNAV
FNCQLYNDERDNTIARWNLIQALWGTGKAYYSVNAPPIDLTQENSLCRFKAIGYSRIPDA
DNNDGLVVLCFNKKEKDVQDGKQQLIAFLNGLLGNKPNLTVTVDNIKSTGENKSQVTVYV
SEKGITGSYRKIPANELVAYLSQVMQKQQLVQNGVEDIFPLVKLDPSQLKEYLDNPPCAI
DARLWKQAQLDNPNPELYIPVPMVGFQQVKHRLKCQEEETARHRAFLDMAAEKIQGLQRQ
HTATQARLKEHRRTLLELQHRVLQVLVRQEITRKVGLSLQPEEEVLTRRFEAMHSQISAP
TQYKGRISEMLSQLRMRRHIDIQNQERYTMDPIAQDDIKAYLSMEQQGMAQLISTINADL
ESLKVIKDGMSELLMSQSIS
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcggtagcggcttcggagcgtccacgtcaacgcccgcacccacgttcgcgttt
ggcaccacacctgcgtccacagcgacgccggttaaacctgtgccaggatttggaacaccc
tcgtttgggtttaatacaccgactacttcaacaccaagcttgtttggctcgccgtcgacg
cagactaccggatttggtactggcactggatttggtaccccgacagccactggttttggc
agcgcaccgagcacaggttttggagctgcacctacatttggtaccccgtcaaccagcgcc
tttggttcggcaccagctttcggtagtacccccgtttcctccacaaccactggattcggt
acaacttcgacatttggcagcactcctgcttccacaactggtttcggtggttttgggaca
gcgacaacatcgacattaagttttggaggtttcggtggatttggaactgcgaccactact
gctgcccctagcttgtttggtggattcggcactccaaacactgcttcaacaggtttcggt
acatcaggttttggtgcatttgggagcaaaccagttactaccagtggtacattcggtgga
tttgggacagggacaggattcactggatttggtattggattggcgcagcctcagcagcaa
cagcaacaacaacaacaacaacctacgaatactgcatcagaagctctctacaatgctgtg
tttaattgtcaattgtataatgatgagcgagataataccattgccaggtggaatcttatt
caagcattatggggtacaggaaaagcttattactccgtaaatgccccacctatagacctt
actcaggaaaattcgttatgcagatttaaagccattggatacagtcgcatacctgatgct
gacaacaacgatggtttagtagtattatgctttaataagaaagaaaaggatgtacaggat
ggaaaacagcaattaatagcatttctcaatggtttgctgggaaataagcccaatctgaca
gtaaccgttgataatattaaatcaacgggggagaacaaaagtcaagtgacagtatatgta
tcggaaaaaggaatcactggttcttacagaaaaattcctgccaatgaattggtcgcatat
ttatcgcaagtcatgcaaaaacagcagttagtacaaaatggagtggaagatatatttcca
ctggtaaaacttgatccatcacagctgaaagagtacctagataatccaccttgcgctatt
gatgccagattatggaagcaagcgcaattggacaatccgaatccagagctgtatattcca
gttcctatggttggctttcagcaagttaaacacagactgaaatgtcaagaagaggaaact
gctagacatagagcgtttttggacatggcagctgaaaaaatacaaggcttgcaaaggcag
cacacagctacacaggcccgacttaaggaacatagacgtacattactggaacttcagcac
agggttctacaggtgctagtacggcaggagattacgcgaaaagttggattatccttacaa
ccggaagaagaagttctaacacgcagatttgaagcaatgcattcgcaaatcagtgctcca
acgcaatataaaggaagaattagtgaaatgctctctcagctcagaatgaggcggcacatc
gatattcaaaaccaagagaggtatacaatggatcccatagcacaggatgatattaaagcg
tacctaagcatggaacagcagggcatggcgcagcttatttcgacaataaacgctgattta
gaaagcttaaaagtcattaaagatggaatgtcagagctcttgatgagccaaagtatatca
tga
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