Trachymyrmex cornetzi: 108767891
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Entry
108767891 CDS
T11212
Name
(RefSeq) splicing factor, arginine/serine-rich 15 isoform X1
KO
K13191
RNA-binding protein 16
Organism
tcz Trachymyrmex cornetzi
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcz03021
]
108767891
03041 Spliceosome [BR:
tcz03041
]
108767891
Transcription machinery [BR:
tcz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108767891
Spliceosome [BR:
tcz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108767891
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
108767891
NCBI-ProteinID:
XP_018373527
LinkDB
All DBs
Position
Unknown
AA seq
1597 aa
AA seq
DB search
MEAVKAFNAELSALYDVKPPISKAKMNSLTRGAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGMEKDVFAPRFAKNMQTTFLNLLKCPQEDKSKVIRVLNLWQKN
AVFPPEVIQPLFDLADPNHPIHKEQPVNSNGTLNASSGSNLSNVSAVTKTPPSTIKNAAK
DPKLFPSGKTIDPVWLAQTKMEAAVNANKLLNQSNSGQVDSSFFDQLQHLQQLLMKKDVT
NEPKSSVKFDKKLLEYDYGEEEDDDVVVTNSPSTAASANTQHNTVSANSSLESLGLLLAN
PEVMRQLQTLQQTMQSNATSSIEMEEKMRKLQQMKQQEEEFDKHLAQTVPNLPFAAECDL
KPSDILKPSTQNYASNMNSNVMQDMSQPPPGYPPAMSYSSQSLSNIRQINQSTHQNQKSP
LLDERQETQDYSGNSVRRDSSSVEIVNCENASSQSRSPERYRHHSRSRSPRLRDRDRDRD
RDRKSRSRSRSRRRRSRSRVRKRDDSREKMTEEEREKDRERRKRGLPSIVRDKLSVCSTT
LWVGHLSKLVHQEELSDTFGELGDIVSIDLISPRGCAFICMNRRQDAYRALTKLKNQKMQ
GKAITLAWAPGKGVKGKEWKDYWEVELGVSYIPWNKLTNITDQELELLEEGGMIDEDTLP
PHLKGKLKHTGTSADVLQQQLHLQQQAIVATGAPIPTLTDGIVNVIQPPANSQQQQQQPP
QQQQLVDTSQPPPIRPPTSAALLPPPNTQLQMMPPAFTMPPGVPRMISHMGLQMPHGLMP
NVPIGVPPPNMQSLLGPPGMMQTMLTPPVNPPFGAGVGVSLLTQIPLPAPAAPSDKPNST
GYEILNITGMPHNVPPIGVPPPTTETSMPNLPMLRQPYGVGPAPPMQMQLPQQQHHSDDM
DVEMEDAMPQSLNSNLPKDKPNLSDQLIAAMNISSNVNDCRMENDQSREYKERERDRENR
ERRERNDRDRGDRMDINECRIDRGRDRGRGRDRGRDNRRRDNRDGRDRERDDRRDRDSRE
TRDSRESSSRHSEGPSGQNQNIQEGEGMKKENKPSLAERLRQLADGTLPLDDRMDRNMRG
NRAERNNERNDRNFEESPGGGVRRPPGDMPISLMDLPKFPGVMPPDRTDFPRGPDFRSGP
PDTREFPQRGLPDRPDRQNFPPRGGPRASQMDDFHDPRMQPGMFPEEHYENRLGHNGPRP
DDFPPGRLGPARDEFERPERGPRRPPVDEYERERFEYEMRRDGFDPRMQDGFDHRGHNER
SDFDLRRREFFGGPMEPVFGMPPLMGPKGPRGPVGPDGFGPRGARGPGPLMFHLRGMGPR
GMRPGMRPPFAPRGPPFDPRESDSFFRPPFDEMRGRPGPHIRPPFGPMGPPAMHGPDGPW
RNQEGGGPTPWSGQEPDGHGQRENHLPRDKQKLAKHQDYKNMSERENRNRNRKSRWGNIS
PQMTDDVDEMPSEEAENKMETSDGSKLEAKDDFDASALAINQQNLLMQENQDESVIHEQN
MMHGDRENEFASVSNDNNVDEMSYKNDETNAFEIGVDHFSSNDLALTQQGEEEQCEYEAP
IPAEDSAQQNVVQSIEQIGHVSENYSEQSVEQQADLL
NT seq
4794 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtgaaggcgtttaacgcggagctctctgctctttacgatgtcaaaccccca
atctcgaaagccaaaatgaattcgcttacacggggagccatcaaagcaataaaattctac
aagcatgttgtacaaagcgtggaaaaatttattcaaaaatgcaagccggagtacaaagta
ccagggttgtatgtaatagattcaattgttcgacagtcccgacatcagtttgggatggaa
aaagatgtgttcgctccacgatttgcaaaaaatatgcagactacctttcttaatctttta
aagtgcccacaagaagataagagcaaagttatacgtgtattaaatctttggcaaaagaat
gcagtttttccaccagaagttattcaaccacttttcgatctggcagacccgaatcatccg
atacataaggaacagccagtaaatagcaatggtacattaaatgcatcatctggaagtaat
ctgagtaatgtaagtgcagtcacaaaaactccgccatctacaattaaaaacgctgcgaag
gatcccaaactatttccatccggaaaaacgattgatccagtatggcttgcacaaacaaaa
atggaagcagcagtcaacgcaaacaaacttttgaatcagtccaactccggtcaagtggat
tcctcttttttcgatcaattacaacatttacagcaattacttatgaaaaaggacgttaca
aatgaaccaaagagttctgtcaagtttgataaaaagctgttagagtatgattacggagaa
gaagaagatgacgacgttgttgttactaattctccaagcacagctgcctcagccaataca
cagcacaatacagtttcagcaaacagcagtttagaaagtcttggactattgcttgcaaat
ccagaggttatgagacaattacaaactttacaacaaaccatgcaaagtaatgcaacctct
tcaatcgaaatggaagaaaagatgcgcaagctgcaacaaatgaaacaacaagaagaagaa
tttgataagcatttagcacaaactgttcctaatcttccatttgcagctgaatgtgattta
aaaccttctgatattttgaaaccaagcacacaaaattatgcatcaaatatgaacagcaat
gtgatgcaggatatgagtcagccaccacctggttatccaccagctatgtcgtattcttcc
cagtctttatcgaacattcgacaaataaatcagtctacgcatcaaaatcaaaagagtcca
ttgcttgatgaacgtcaagaaacgcaagattattctggaaacagtgtcagacgtgatagc
agcagtgtagaaattgtaaactgcgaaaatgcgagttcccaaagtagatcgccagaacga
tatcgacatcacagtcgatcccgatctccgcgactcagagatagagatagagatcgagat
agagatagaaaatctcgatctagaagcagatcgagacggagaagatctcgttcaagagtt
cgaaaacgtgatgatagccgagaaaagatgacggaagaagagcgggaaaaggatagggaa
cgacgcaaacgcggtttgccgtcaatagttagagataaattaagtgtttgcagtacaaca
ctttgggtaggacatttgtcaaaactcgttcatcaagaagaattatccgatacatttgga
gagcttggtgatattgttagcattgatttaatctcgccaagaggttgtgcatttatatgt
atgaatagaagacaggacgcatatcgagcactaacaaaattaaaaaatcaaaagatgcaa
ggcaaagctattacgttggcatgggcacctggtaaaggagtaaaaggcaaggagtggaaa
gattactgggaagtagagctaggcgtcagttatatcccctggaataaattaaccaatatt
accgatcaagaattggagctactagaagaaggagggatgatagacgaagacacattacct
cctcatttgaaagggaagttgaaacacactggcacaagtgcagatgttttgcaacaacag
ttgcatctgcaacagcaagcaatagttgccactggcgctcctatccccactttgacggat
ggtatcgttaatgtcatacagccaccggctaattcacagcaacaacaacagcagccgccg
cagcaacagcaattagtcgacactagtcaaccgccaccaatcaggccaccaacatcggct
gcgctactgcctccaccgaacactcagttgcaaatgatgccgccagcatttacaatgcca
cctggagtgccacgaatgattagccacatgggcctacaaatgccgcatggactaatgccg
aatgttccaatcggagtaccaccacctaacatgcagagtctactgggaccacccggcatg
atgcaaaccatgttgacaccaccagtaaatccgccatttggagcaggtgttggcgtaagt
ttattgacgcaaattccactgcccgcacctgcagcgccttcggataagccaaattccact
ggatacgagatcctgaacattacaggtatgccgcacaatgttccaccgattggagtacca
ccgcctacgacagagacgagtatgccgaacttgccgatgttacgacaaccgtacggagtt
ggtccggcgccaccaatgcagatgcaactacctcaacaacagcatcactcggatgatatg
gacgtagagatggaggatgcaatgccgcaaagtttgaacagcaacttgcctaaggacaag
ccgaatctcagtgatcagttgatcgcggcgatgaatataagcagcaatgtaaatgattgt
cgtatggagaacgaccaatctcgcgagtacaaagaacgggaacgtgatcgggagaacagg
gaaaggagagaacggaatgatcgagatcgtggagatcgcatggatatcaacgaatgcaga
atagatcgtggcagagatagaggaagaggacgagatcgcggtcgagataatagacggaga
gataatcgtgacggtcgtgacagagagagggatgatagacgcgacagagacagccgtgag
acccgggatagtcgggagagcagcagcagacactcggaaggacctagtggacaaaatcaa
aacattcaagaaggcgagggcatgaagaaggaaaacaagcccagtctagctgaacgacta
cggcagttagcggacggtacgttaccgctggatgaccggatggataggaacatgcgtggc
aaccgagctgagcgtaacaacgaacggaacgacaggaactttgaagaaagtcccggaggt
ggagtacgacggccacccggtgacatgccgatctcattgatggacctacctaagttccct
ggagtgatgcctccggatcgaaccgactttcctcgaggaccggatttccggagcggaccg
ccagacacacgcgagtttccgcaacgcggcctgcccgaccggcctgatcgacagaatttc
ccgccgcgcggtggaccgagggcttcacagatggacgacttccacgatcctagaatgcag
cctggcatgttcccggaagaacactatgagaataggttaggccacaatgggcctcggcct
gacgactttccgccgggtagactaggcccggctagagacgagtttgaacgaccagaacgt
ggtcctcgcagaccgcccgtagacgaatacgaacgtgagcgtttcgagtacgagatgaga
cgtgatggatttgatccgcgaatgcaggacggcttcgatcacaggggtcacaatgagcgc
tccgactttgatctccgcagaagggaattctttggtgggccgatggaaccggtgtttgga
atgccgcctttaatggggccaaaaggaccgagaggaccggttggtcctgatggatttgga
ccacgtggagccagaggacccggtcctctcatgttccatctacgtggcatgggtccaaga
ggtatgaggcccgggatgaggccgccgttcgcacctcgaggtccaccattcgatccaaga
gaatcggactctttcttccgaccgccgttcgatgaaatgcgcggtcgtccaggaccacat
atccgaccaccgtttggcccgatgggtccaccggcaatgcatggaccagatggaccatgg
agaaatcaggagggcggtggacccacaccatggtctggacaggaacccgatggacacgga
caacgcgagaatcatcttccacgagacaagcaaaaattagcaaagcatcaagattataaa
aacatgtccgagcgggagaaccgtaatcgaaatcgaaaatctaggtggggcaatattagc
ccacaaatgacggatgacgtggatgagatgccgtcggaagaagccgaaaataaaatggag
acatcggatggcagcaaattagaagcgaaggatgactttgatgcttcagccttggctatc
aatcaacagaatcttctgatgcaagagaatcaagatgagtcggtaatccacgagcaaaat
atgatgcatggtgacagagaaaacgaatttgcaagtgtatcgaacgataacaatgttgat
gagatgagttataaaaatgatgagaccaacgccttcgaaattggtgtggatcatttctcc
agcaacgatttagcgctaacgcagcagggtgaagaggaacagtgtgaatatgaagcaccc
attccagctgaagattcagcgcagcaaaatgtggtacaatcgatcgaacaaatagggcac
gtcagtgaaaattatagtgagcaatcagtggaacagcaagcggatttgttataa
DBGET
integrated database retrieval system
