Trachymyrmex cornetzi: 108767902
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Entry
108767902 CDS
T11212
Name
(RefSeq) probable oligoribonuclease isoform X1
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108767902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcz03019
]
108767902
03009 Ribosome biogenesis [BR:
tcz03009
]
108767902
Messenger RNA biogenesis [BR:
tcz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
108767902
Ribosome biogenesis [BR:
tcz03009
]
Eukaryotic type
Pre-60S particles
RNases
108767902
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Vert_IL3-reg_TF
Motif
Other DBs
NCBI-GeneID:
108767902
NCBI-ProteinID:
XP_018373546
LinkDB
All DBs
Position
Unknown
AA seq
234 aa
AA seq
DB search
MVYNVHMIRLGSKTTNMIFTRATGLLSRYLYRGAQRCLNNDHAIWTPTETRNEIKNEKHI
VWLDMEMTGLEVETCHILEVACFITDEQLQLASDYLNIVVHQPDKVLENMSDWCKVQHKK
SGLIDECRLSKITLEETQQRTLNFLENHVPEGTCPLAGNSVYMDRIFLKKYMPLVDNYLH
YRIIDISTIKDLARRWQPTISKAAPKKQHCHRAEHDIKDSLNELRYYRKYLFVS
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggtgtacaacgtgcatatgataaggttaggttctaaaacaacgaatatgatctttacg
cgcgctactggattgctctccaggtacctgtatcgcggagctcaacgttgtttaaataac
gaccatgcgatttggacaccgacagaaacacgaaacgaaattaaaaatgagaagcacatt
gtctggcttgatatggagatgacaggactagaggtggaaacatgtcatatcttggaagtt
gcatgtttcataactgatgaacagttacagcttgcgagtgattacttaaatattgttgta
catcaaccggataaggttttagaaaatatgtctgattggtgtaaagtacaacacaaaaag
agtggcttaatcgatgaatgtcgactgagtaagattacattggaggaaacgcaacaaagg
acattgaattttttggagaatcatgtcccagaaggaacatgcccgttggctggaaactca
gtttatatggatcgtatattcctaaagaagtatatgccgttggtcgacaattacttgcac
tacagaattattgatattagcacgattaaagatttggctaggagatggcaaccgactata
agtaaagcagctccaaaaaagcaacactgtcacagagccgagcacgacataaaagatagt
ctaaatgagcttcgttattataggaaatatctatttgtatcataa
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