Trachymyrmex cornetzi: 108768032
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Entry
108768032 CDS
T11212
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108768032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcz03009
]
108768032
Ribosome biogenesis [BR:
tcz03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
108768032
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WD40_Gbeta
Beta-prop_TEP1_2nd
WDR55
Utp13
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_WDR41
Beta-prop_DCAF4
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_Aladin
NBCH_WD40
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_Vps41
VPS8_N
Beta-prop_WDR75_2nd
Beta-prop_VPS8
Tricorn_2nd
PSI_PlexinA-B
Motif
Other DBs
NCBI-GeneID:
108768032
NCBI-ProteinID:
XP_018373743
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MSKANLKEAFEVESKHGAFYTGGNIQWSANAEYLFCQKGGTVSILSMSKGSVISSLCITE
TDQLEDTINCFALCNEDTGIITHHKSGLFKLWDWKTNKLMKLWKSIHKGPVMQITLSNNS
ILMASGGSDGSVRLWNLQHHACTHNFKGIQGVVSVLEFYSNSEKSLLFGAGDNTKIYGWD
ITTGQEKVILSGHFSKVTSLSFHENGTYLVSSGRDRVLILWDISTGTSIRVLPVYEGIEG
IFIISAKCLPVFITSRKSDGIYVASAGEKGVVKIWEMKTGKQIYVQDDPLVPPSKEEGGL
SITHLLYNSISNIFAVVSVDHNIIIHSMELFECKKQLVGYSDEILDVAYLGDNDSHVALA
TNSCDIKLYEIASMNCQLLCGHTDSILALATTLANVNLLLSSAKDNSVRVWLLDKDTMRM
SCIGHAIRHTASISSIAISQTLPKFFTTVAQDSCLKLWELPNNLESHNQDLSLNVRHTTL
AHQKDINCVIISPNDKLIATASQDKTAKLWYAENLQLLGVLHGHRRSVWCVRFSPIDQVL
LTTSADCTMKLWSITELNCLKTFEGHESSVLRGEFLSRGMQLITSGGDGLLKLWNIKTSE
CISTLNQHESHVWTLAVTKDQKHIISGGSDSLLVIWRDVTEERKAQAASEKAQFVLEEQR
LANLLIAEELQAALKLALKLERPLQVLKIIEAISKKTNNEFTEIIKELKPSHKETLLKCA
VTWNMNSRNSLAAQVIINALITEIGTQELQTPNLSSTLEVMMPYTDRHFKRLTKLLQDLY
LLTYTFNRMKPDIISIDTK
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagctaatcttaaggaagcatttgaggtggagtccaagcatggagcattttat
actggtggcaatatacaatggagtgcaaatgcagaatacttattttgccagaaaggaggc
actgtgtccatactatctatgagcaaaggctctgtgatatcatcattgtgcataacagag
actgatcaactagaagatacaatcaattgttttgcactttgtaatgaagatacaggcata
atcactcatcacaagagtggattgttcaaattatgggattggaaaactaataagttaatg
aaattatggaaatcaattcataaaggacccgtaatgcaaataactctttcaaataatagt
attttaatggcatctggtggaagtgatggatctgtcagattgtggaatttacaacatcat
gcatgtacacataattttaaaggaatacagggagtagttagcgtgttggaattttattcc
aacagtgaaaaatcacttctctttggagctggtgacaatacaaaaatttatggttgggat
atcactactggacaggaaaaagttattctctctggacattttagtaaagtaacatctctt
agttttcacgaaaatggaacttatttagttagttcgggaagagatagagtactgatcttg
tgggatatatccactgggacatcaatacgtgttttaccagtatacgaaggaattgaggga
atttttataatatccgcgaaatgtcttccagtatttattacatcacgtaaaagcgatggt
atatatgttgcttcggctggtgaaaaaggtgtcgtcaaaatctgggagatgaaaacgggc
aagcagatttatgtgcaagacgatcctttagtgccaccatctaaggaagaaggaggctta
tcaattacgcacttactttacaacagcatctctaatatttttgcagtagtatctgtcgat
cacaacataattattcattcaatggagttgttcgaatgcaaaaagcagttggtaggctac
agcgatgaaattctagatgttgcgtatcttggagataatgacagtcatgttgcactcgcg
actaatagttgtgatataaaactttatgaaattgcctctatgaattgtcaactattatgc
ggtcatactgacagcattttggctctcgctacgactttggcaaatgtaaatctgcttcta
tcttcggccaaggataatagtgtccgcgtatggctactggataaagacacaatgaggatg
tcttgcattggacatgccattagacatacagcatcgattagttctattgccatatctcaa
acattacctaaattcttcactactgttgctcaagattcatgcttgaaactgtgggaatta
cccaacaatctcgaatcacataatcaagatttatcattaaatgtaagacatacaacatta
gcgcatcaaaaagatataaactgtgtaatcatctcaccaaatgacaaactgattgctaca
gcgtcgcaagataaaactgctaagttatggtatgctgagaatttacaattactcggtgtg
cttcatggtcaccgaagaagcgtatggtgtgttcgattttcaccaattgatcaagtactt
ttaacaacgtctgctgactgtactatgaaattgtggtctataacggagctcaattgtcta
aagacgtttgaaggacacgaatcttctgtcttaagaggagaatttttatcacgcggtatg
caactaattacgtcgggtggagacggtcttctgaaattgtggaacatcaaaacgtctgaa
tgcatatcaactttgaaccaacatgaaagtcacgtttggacgctcgcagttacaaaagat
cagaaacatattatcagtggaggtagcgattcattactggttatttggagagacgtaact
gaagaaaggaaagcgcaagccgcatcagagaaagcacaatttgtgcttgaagagcaaagg
ttagccaatttactcatagctgaagaactgcaggctgcattaaaattggctctaaaacta
gagcgaccattacaagtgctcaagatcatagaagctatatcgaagaagacgaacaacgag
tttacagaaataataaaggaattaaaaccaagtcacaaggaaacgttactcaagtgtgca
gttacatggaacatgaacagccgaaactcgcttgctgctcaagtaattataaatgcctta
ataacagagatcgggacgcaggagctgcagacaccaaatttatcttctactctagaagtt
atgatgccttataccgacagacattttaaaagattgacaaaacttttgcaggatctatac
ttattaacgtatacctttaatcgtatgaaacccgatattatatcaattgacactaaataa
DBGET
integrated database retrieval system