Trachymyrmex cornetzi: 108768231
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Entry
108768231 CDS
T11212
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108768231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcz03019
]
108768231
03036 Chromosome and associated proteins [BR:
tcz03036
]
108768231
Messenger RNA biogenesis [BR:
tcz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108768231
Chromosome and associated proteins [BR:
tcz03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108768231
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
108768231
NCBI-ProteinID:
XP_018374091
LinkDB
All DBs
Position
Unknown
AA seq
1910 aa
AA seq
DB search
MFGQTGNTSFSGFSTATQNSPFGQSAFSKSITTTSFGSGATPVFGSSNTSSLFSSKPTGS
TTGGLFGNTTTPPAFRQPTNTQSFGGFGTTNTSTNLFGTQQNAGTNLFGTSTGTSAFGQA
NKPGFNFGTTSGTNLFGQPQQNAQQTTPFGQTNTTTNTNLFGTTTGFGNTNPTTIPAGTA
VKFTPVITTDSMSKNGISHSISARHCCIASMKEYESKSYEELRFEDYQLGRKGPQTGLFG
TSAQTSPFGSAAAGTSTAGTGFGSMTGGFGTTSQSGSTGLFGKPISNFGTPATTTTNSFA
FNSTPTTNLFGTNTQTKPFGTAAPTPLFGTSSTNQTAGTGFGSINTGQNTGFGSTFGSTP
PNQSIGLFNQNKSAFNIPSTSTSAVFTGFGQPATNTTTPLFGNKTTTTGFGTTSTFGAAA
SSTFGTNTGFNSGTNAGSSLFNSSFKPAGQTSGFSFGTTPASSSGLGTSTGLNLSGGSSL
FGQQKPGSLFGNAGNNTTFNTSGTFGSSTFGTTSNMISGTGMSSLSGGMANQTKTNGSVP
VHQQILALVSAPFGDSPLLKNLLPASGKTEELLKPTNPASKVLNSPQYRVTANNKSPKIK
ARVVSSTQLSKKSLFDGLEEEDPVITEAFQPRPSAKRLVLRPKLATNSSIQSPIENVESV
TNDTADDRTDTNIIHSNNIEVSDKENHSQDNNRFANDRRSSTSWLKSTLPRKNKISNDEL
LEGQQSPFSGTNVSEEMNNTVVELRTQNNISNHSEPINLIEVPLNSTFDEKNSVNLTMQS
AESGQETDENSFSMLQSNWSMNMAKVTLRRAGYYTIPSLDKLDDFVCGETCIVPNFTIGR
EGYGNVYFPDSFDIYGLNLDEIVHFRHKEVIIYPDDEKKPPVGQGLNRKAQVTLDKVWPH
DKSLHEPIMDPQRLAAMNYEGKLRRVSAKHDTRFLEYRPETGSWVFKVDHFSKYGLSDSD
EDDNQIPSTSEAKKLKGFSTAIQKGKLVDPSTVINKEAINGAINGTLDGTKIGNSKHLSM
IESNFLGKVPIDHFTYNDHNYEERGMIVSPVEETPFGCSGFVPGDYNYEKRMTISPIGDN
ARVTGTDSHKLQLMKASFFDVNDEDVNDGTSNGIFSSVQKTLTSYFPDITEIKNDEVPYN
ATTLRATLIANKALSACPENVLYTSSRKSHLPCIGVKDKQFIEKAIPPPVITPVTNVLKY
HYEVVPLEESRLNKLRFRCVADTGIYMGRTFRPSWGAGLTLLSLSTQEQAIKMQLKNTFS
QLSRYVSGRLSDDVSSTVIVQRLQIVGGDEYDTKMFKDSIECHLRIQLDHCVMGHEGDCP
TFDVTTDSANEALRLHCTLAQDLAEKEQRPSEDANDEQMQCGSATERLYRQYASIVWTLC
VALWGNYIDQDTANNANEEHYNVIVRREAVGEWLRNVVQKTIEREIKNIDIVTKNSHEKI
ILSLLSACKLEDACQEARKAGDHCLALLMAQLRSGATVKKLIKQQLALWQETDVDEHLTI
DRLKLFMLVAGEPLISSKHGTINVCEDLDWKRAFAIHLWYLSPPTSSITDALDLYEASFN
TTEAQAYAAIPEPEYKENDYDAELNNGKRIHDLCFQLLKLYCTGNHDLGELLNPLSYTAN
PLDYRLSWLMQQTLVALGYTHLSDHVAALTHTNFATQLEAHGLWHWAIFVVLHLRDSSRR
RIAVQDLLLRHIEIEDTPEYVKHEQFLKEELGISLVWIHQAKAIKSSINKRYGEAAWYYI
QAEQWTQAHEIIIEHLAADAIINENYEYLKSLLSSLVPIECSSTISGWSYQGQLLWEYME
ITSEIQSLLKSAPDYCGLTYQLETLKPRLTNLCHKIDQFPCLTAKHKLCQAEIAKRTLHL
ARNMLLLQKNEQRSVTKLLVRLISQLPLPEDYAQQELRPIVNMRVTEVMP
NT seq
5733 nt
NT seq
+upstream
nt +downstream
nt
atgtttggacaaactggaaatacatcattcagtggatttagtacagcgacgcaaaacagt
ccgtttgggcaatctgcatttagtaaatccattactacaacaagttttggtagtggcgca
acacctgtctttggtagtagcaatacttcatcactctttagttctaaacccacaggttct
accacaggtggcttgtttggaaataccacaacaccaccggcatttagacagccaactaac
actcagtcttttggaggttttgggacaacaaatacaagtaccaatcttttcggtacccaa
caaaatgctggtacgaatcttttcggtacaagtacaggaacttcggcatttggtcaagcg
aacaaacctggttttaactttggcacaacatctggaactaatctatttggacaaccacaa
cagaatgcacagcaaactactccgtttggtcaaaccaataccaccacaaatacaaatctt
tttggtacaacaacaggttttggcaatactaaccccactactataccagctggtaccgct
gtgaaattcacacctgtcattacaactgattctatgtcaaaaaatggaatatcacacagc
atttcagcccgtcactgttgcattgcatctatgaaggaatatgaatctaaatcatacgag
gagttacgttttgaagattatcaacttggaagaaaaggtccacaaacaggtctttttggg
acatcggcgcagacatcaccgtttggtagcgcagcagctggtactagcacagctggaaca
ggatttggatcaatgactggaggatttggtactactagccaatcaggatcaactggacta
tttggaaaacctattagtaattttgggacaccagcaactacaacaacaaatagttttgca
tttaattctacgcccaccacaaatttgtttggtactaatactcaaacaaagccatttggt
acagctgccccgacgccgctttttggcactagtagcactaatcaaactgctggaacaggt
tttggtagcattaatactggacaaaatacaggatttggatctacatttggttccacacca
cctaatcagagcattggattgttcaatcagaacaaatctgcttttaatattccatcgacg
tcgactagtgccgtctttactggttttggtcaaccggctacaaataccaccacaccatta
tttggtaacaaaactactactacaggatttggaacaacatctacgtttggtgcagctgcg
tcttccacattcggaactaatacaggttttaattctggcactaatgctgggtcttcattg
ttcaactcgtcttttaaaccggctggacaaacatcagggttttcattcggaactacacct
gcgtcttcaagtggacttggcacgagtactggtttaaatttgagcggtggttcttcatta
tttgggcaacaaaagccaggcagtttgtttggaaatgctggaaataatacaacgtttaac
acttccggaacatttggttcttctacttttggaacgacctctaatatgatatctggaaca
ggaatgagctcgctcagcggaggaatggcaaaccaaactaaaacaaacggttcagtacca
gtacatcagcaaattttggctctcgtttctgcaccattcggtgattcaccattattgaag
aatcttttaccagcatctgggaagactgaggaacttttaaaacctacaaatccagcatcg
aaagtattgaacagtccgcaatatagagttactgcaaataataaatctccgaaaattaaa
gctagagttgtcagttctacacaactatctaagaaatctttgtttgatggtctcgaagaa
gaggatcccgtgataaccgaggcttttcaacctcggccaagtgcaaaacgtttagtatta
cgaccgaaattagcgacaaattcttcgattcaatctcccatagaaaatgtggaatccgtg
acaaatgataccgcagatgataggacagatacaaatataatacatagtaacaatattgaa
gtcagtgacaaagaaaatcacagccaagataataatcgatttgcgaatgatcgacgatca
tctacatcttggttaaagtcaacacttccgcggaagaataaaatttcaaatgatgaattg
cttgaggggcagcaatcacccttttctggaacaaatgtatccgaagagatgaataataca
gtggtcgaattaagaacgcaaaataatatatcaaatcattcagaaccgattaatttgatc
gaagtgccactaaattctacttttgatgagaaaaattctgtgaatcttaccatgcaaagt
gcagaatccggccaggaaacggatgaaaattcattttcgatgttacaatcaaactggtct
atgaacatggctaaagttacattacgacgagcaggctattataccattccatcgctcgat
aaactagacgatttcgtttgcggcgagacgtgcatcgtaccgaactttaccatcggccgt
gagggttatggcaacgtatactttccggattcgtttgatatttatggcttgaatcttgat
gaaatcgtacattttcgtcataaagaggtgattatttatcccgacgatgagaagaagcca
ccagtgggacaaggcctgaatcgaaaggcacaggtcaccttggataaggtatggccgcat
gacaaatcgctgcatgagccgattatggatccacagcgactcgccgcgatgaactacgaa
gggaaattacgtagagtatccgcgaagcacgacacccgtttcctcgagtatcggccggaa
actggctcatgggtattcaaggtcgaccacttttccaagtatggtctcagtgattcagac
gaggatgacaatcagatcccgtcaacttcagaagcaaaaaaattgaagggattctccacg
gccatacaaaagggcaagctggttgatccatcgacggtgataaataaggaagcgatcaat
ggagcgatcaatggaacgcttgacggtacgaaaatcggaaacagcaagcatctgagtatg
atcgagagcaattttttaggaaaggtcccaattgaccattttacctacaacgatcacaat
tacgaggaacgaggaatgatcgtcagtccagtcgaggaaactccatttggttgttctggc
tttgttcctggagattacaattacgaaaaacgaatgaccattagtccgatcggtgataac
gctcgtgtaaccggtacagacagtcataagttacagcttatgaaagcaagctttttcgac
gtaaacgatgaagatgtaaacgacggaacaagcaatggtattttctcttccgtacagaaa
actttgacaagctatttcccagatattacagaaatcaagaatgacgaagttccatacaac
gctacgactttacgagcgactcttatcgcaaataaagcactatctgcgtgtccggaaaac
gtgctttacacatcgagcagaaagtcacatttaccttgtatcggtgtcaaagacaaacag
tttattgaaaaagctattccaccacctgtgattacaccagtgacaaacgtgttgaagtat
cactatgaggttgttccgcttgaagagtccaggttgaataagttgcgatttcgttgcgtt
gccgacaccggtatatacatgggcaggacgtttcgaccaagttggggtgccggtctgaca
ttgttatctctgagcacgcaggaacaggcaatcaagatgcaactaaaaaacacatttagt
caattaagccgttacgtctctggtcgtctgtcagacgatgtctcatcgactgtaattgtt
caacgtttacagatcgtaggtggtgacgagtatgacacgaagatgttcaaggatagtata
gaatgtcacttgagaatccaactggatcattgcgtgatgggtcatgagggagactgtccc
acgtttgacgtaacgactgacagtgcgaacgaagcgttgcgattacattgtacgttagcg
caggatcttgctgaaaaggaacaaagaccaagcgaggatgccaatgatgaacagatgcag
tgtggcagcgccaccgaaagattatatcgtcagtacgcgagtattgtgtggactttatgc
gtagcactctggggaaattacatcgatcaagacacagctaataacgccaatgaggaacat
tataacgtcatagtgagaagagaagccgtaggcgagtggttaaggaatgtggtccagaaa
acgatcgaacgagagatcaaaaacatcgacattgtaactaagaattctcacgagaaaata
atattgtcgctgctttctgcttgcaaactggaggatgcttgtcaggaagcacggaaagcc
ggagatcactgtctggcattattgatggcgcaattacgaagtggtgcgacagtcaagaaa
ctgattaaacaacaacttgcgttatggcaagaaaccgatgtagacgaacatctcacaatt
gatcgtctaaagctattcatgttggttgcgggtgaaccgcttatctccagcaaacacggc
accattaatgtgtgcgaggatctggactggaagcgggcatttgccattcatctatggtat
ttgtcaccgccaacttcctcgatcactgatgccttagatctctatgaagcatctttcaat
acaacggaagctcaagcgtacgcggcaattcctgaacctgagtataaagagaacgattac
gacgccgagttaaataacggcaaacggatacacgatctctgttttcaacttttaaaattg
tattgcacgggaaatcatgatttgggcgaacttctgaatccactatcatataccgccaat
cctttggattacagattgagttggttgatgcaacaaacactcgtagctttgggctacacg
catctctctgatcatgttgctgcattaacacatacaaactttgcgacacaattggaggca
catggactttggcattgggcaatattcgtagtattacacctacgagattcgtctaggcga
cgaattgctgtgcaagacttgctgttacgtcacatagaaatagaggacactccggaatac
gtgaagcatgagcaattcttgaaagaagagcttggtatatcattggtttggattcatcaa
gccaaagctattaaaagtagcatcaataagaggtatggcgaagcagcttggtattacatt
caggcggaacagtggacccaagcccatgaaattattatagagcatttggcagctgatgct
ataataaatgaaaactacgaatatttgaaatcattattaagttcactagtaccaattgaa
tgtagcagcacgattagcggatggtcatatcaaggacagctcttatgggaatatatggaa
ataactagcgagattcagagtctgttaaaatccgctcctgactactgtggactaacttat
caactggaaactctgaaacctcgattaacgaacttatgtcataaaattgatcaattccca
tgtttaactgctaaacataaattatgccaagctgaaattgcaaaaaggactctacattta
gctagaaatatgctattgctgcagaaaaatgagcaaagatctgtcacgaagttattggtc
cgtctgatatctcagttaccattaccggaagattatgcacaacaggaactgcgacccatc
gttaatatgcgtgtaacagaagtgatgccataa
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