Trachymyrmex cornetzi: 108768282
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Entry
108768282 CDS
T11212
Name
(RefSeq) calsyntenin-1
KO
K22659
calsyntenin 1
Organism
tcz Trachymyrmex cornetzi
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tcz04515
]
108768282
Cell adhesion molecules [BR:
tcz04515
]
Cadherins
Cadherin related
108768282
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Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
Laminin_G_3
Glyco_hydro_16
Toxin_R_bind_N
Motif
Other DBs
NCBI-GeneID:
108768282
NCBI-ProteinID:
XP_018374165
LinkDB
All DBs
Position
Unknown
AA seq
887 aa
AA seq
DB search
MLAVTDQSYTCVFAAPRLDLESLESGYHGLVKENETLVEVTPQIRALGTKVCSFRIANKH
HGEAPFEIVLKEMGMAELRAFRVLNCEKRRNYKFDIAAVGCNGVQSENATVHITVVDVNE
YAPQFLQPAYVSTVDEGRLYEEVVRVEASDRDCTPKFGDVCKYEILTADQPFIIDNEGAI
RNTEPLDYERSHNYILSVVAYDCGMKQSAPAMVTVKVNRVCAPGWRGIPERVDYAAGVGS
QPLLPSARLDLCDAPCILRNVRATLTLATDHIGKGCDRDTYGVRSQRKLCGASRDSVDLL
PTPGPTTSWTATLSRDEGREADEIFEFDGVDSAAIVPNDVLEHSLAQKFTIGVWVKHRPR
PRQDPHVKEHILCAADDHKMNRHHYALFIRNCRLILLLRRDFSEGDPNIFRAAEWRWKLG
QVCDDKWHHYAIQVDFPRVNLYVDGEEWHADEKNPEVIDDWPLHPAKGVNTTLVVGACWQ
GSENKTKHHFRGYLAGLSVLVGRNEKPEVLSCLRRCQEGIHVPPMDLLQPGTQLLTNSDM
TEVRIDGDNRTNVETLLRRIGYSNTRRFPTPGRRNFRLDTTIVCEGSENTPLPVPTVQSY
VTVLPPPRPGITVNGTGYVAREYADFRLGVRVFPDARVTAGSAARLDACAVSVYPSLNPD
HESLGLPGDALLAFHDISARVDRDGVVLSGADSPYNYQQLIRLIMYTNRKPAYYLDRVFK
LTCSELSGRFASNEYVQTLAVIHPKEKTTVLPHTTPGEPPIARIVEPAPGHAQLSPHHAD
LTEEYATAALREGSAGDELAAETEMAWDDSALAITVNPMDRLTEQDQHHQSQRDEDVDDS
GSSDSEDGSFRDDDLDSSDCENDCDLSNGRHRHHNSPHDLEWDHRDV
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgttggcggtcactgatcagtcgtatacatgtgttttcgcagctccacgactggacctg
gagagcctcgagagcggatatcacggcctggtcaaggagaatgaaactttggtcgaggtc
acgccgcagatccgcgccctgggaacgaaagtttgctccttccgcatcgcgaacaaacac
cacggtgaggcgccgttcgagattgtcctgaaggagatggggatggccgagctgcgggcg
ttccgagtcctgaattgcgaaaaacgccgtaattacaagttcgacatcgccgcggtcggc
tgcaatggagtgcaatcggaaaacgccacggttcatattactgtggttgacgtcaacgag
tacgcgccgcagtttctccagccggcctatgttagtactgtggacgagggacgcctctac
gaagaggtggtccgcgtcgaggcgtccgaccgtgactgcacgccgaaatttggcgatgtc
tgcaagtacgagatcctcaccgccgatcagccgttcattatcgacaacgagggtgctatc
cgcaataccgagcctttggattacgaacgctcacacaactacatactcagcgtggtcgct
tatgactgcggtatgaagcagtcggcgccggcgatggtgacggttaaggtgaaccgcgtg
tgtgctcctggatggcgaggaatccccgagagggtagattacgctgccggcgtcggttcg
caacctctattgccctcggcgcgacttgatctttgtgatgcaccctgcatcctgcgcaac
gtgcgcgccaccctgactttggccaccgatcacatcggcaagggttgcgatcgtgatacc
tatggggttcgcagccagcggaaattatgcggtgcctcgcgcgacagcgttgatctactg
cccacacctggacccacaacttcctggacggccactctttccagagatgagggtagagag
gctgatgagatcttcgagtttgacggcgtagactcagccgcgatcgtgccgaacgatgtg
ctggagcatagcctggcgcagaagtttaccatcggtgtctgggtcaagcaccgaccacgc
ccgcgacaggatccacatgtcaaggaacacatcttgtgtgctgccgacgatcacaagatg
aataggcaccattacgccctgttcataaggaactgcagattgattttgctgctgcgacgc
gacttctccgagggtgatcccaacatcttccgtgctgccgaatggcgttggaaacttggt
caggtatgcgacgataagtggcatcattacgcgatccaggtagactttccacgtgtcaat
ctatatgtggatggcgaagagtggcatgctgacgagaagaaccctgaagtcattgatgac
tggcctttacacccggctaagggcgtcaataccacccttgtggtcggagcatgctggcag
ggctccgagaacaagaccaaacaccatttccgtggttacctcgccggtctgtccgtttta
gttggtcgaaacgagaaaccggaagtactctcgtgtttgcggcgttgtcaggaaggcatt
cacgtaccaccaatggacttgttacaaccgggtactcagctgttgaccaattccgatatg
accgaagtgcgtatcgatggtgataatcgtacaaatgtggaaaccttactgcgtcgtatt
ggctactccaacactcggcgtttcccgacgcccggtcgccgtaacttccgcctcgacaca
acgatcgtctgtgagggtagcgagaacacgcccctaccggtaccgactgtgcagtcctac
gtcaccgtactaccgcctcctcgaccaggcatcaccgtcaacggtaccggttacgtagcc
cgagaatacgctgatttccggttaggagtacgtgtgttccccgacgcgcgcgtcaccgct
ggatcggccgcccgattggatgcttgcgctgtcagtgtttatccaagtctcaatccagat
catgagagcttaggattacctggtgacgccctgctcgcattccacgatatctccgctcgc
gtcgatcgggatggcgtcgttctttccggagcggattcgccttacaactaccaacaactc
atccgtcttatcatgtacacgaaccgtaagccggcttactatctcgatcgcgtctttaaa
cttacctgttccgagttgagcggccgcttcgccagtaatgagtacgtgcaaacgttggcc
gtaattcatcctaaggaaaagacgaccgttttgccgcacacgacgcccggagaaccgccc
attgccagaatcgttgaaccggcaccaggtcacgcacagctctcgccgcatcatgccgat
ctaacagaggagtacgctacggcagcgcttcgtgaaggatctgccggtgacgagctcgcc
gcagagacggagatggcctgggacgactcggccctcgccatcaccgtgaatccgatggac
aggttgacggaacaggaccagcatcatcagagccagcgggacgaggacgtggacgactcc
ggtagctccgattccgaggatggctcgttccgagatgatgacctcgacagctccgactgt
gagaacgattgcgatctcagcaacggtcggcaccgccatcacaactcgccgcacgatctg
gagtgggatcatcgtgatgtttaa
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