Trachymyrmex cornetzi: 108768622
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Entry
108768622 CDS
T11212
Name
(RefSeq) protein CASC3-like isoform X1
KO
K14323
protein CASC3
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03013
Nucleocytoplasmic transport
tcz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108768622
03015 mRNA surveillance pathway
108768622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcz03019
]
108768622
Messenger RNA biogenesis [BR:
tcz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108768622
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
108768622
NCBI-ProteinID:
XP_018374625
UniProt:
A0A151IU60
LinkDB
All DBs
Position
Unknown
AA seq
801 aa
AA seq
DB search
MSDTRRRRKSNQSCGSDDLSDSYEELNATKETQSSEQTDGHQDSECDIYESDSDAESQEG
GEQRESGDGQEEEKPQKKLDDDEDRRNPQYIPKRGTFYEHDDRTTDEVTENNTEQQTNAK
ETKEKKVWKDKEDRWDHDRYNDEEQAPKRPEELIATYGYDIRNEEGPPRARRRRRYGRGP
NKYTRNWEDEDAYGKTTIGRGNNRRFHKNNEDFPALGNSKNTPNKVEEPVISSAWYSSKN
KTQSKTQNFPPLQSQQDNAKTKPAIASNTSTSENKVSDESTNTSWKKDGRHITQNQNTNG
NSGSGGDAEKLTNTKPLSRENNKRNTQESVSLVASRTRGRGFKSNANNNMVTNRIVENKV
KGRGPGPVTIENRRNNTAQHNEEHQLAHDMKQQLNINDGSQYHQPARHNKGFFTSANQHR
SNTVPPRMQQQQQQQQQQQQSHQQQTHSPQQTLQQQQQQDSSGNRPKRYSSLRQRPTITE
TSAQQNYPSQHAQHGYFPPQAGNSRAVLESQGYPQSHFEQSSPVAPATAPMAGQPVISLP
PGGQAASYAPPPFLVPPPQFIPPQTAPPSIINYVPGPNGPTFPPNFQGYQGYNPSVQPQG
PPPPQELFQPQGCTYYSPAQQQQQQQQAAPLRRPKAAIPILPPPDNQQSGRGRGRSTQYQ
NNQSSSNTQQQTEQEAKSGNMVESDEKPVPGQFDSVQIEQPNTLNQEPQKDQDTETIRTV
NDMDEKVEIITNADSHINIDASPVKKDNLDDSVSVKELLEATSNEKNTVSHSPTTLASVE
TELGNIESAIPESTIVEKAAA
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatacacggcgacgtcgtaaatccaaccagtcatgcggttccgacgatctctcc
gattcgtacgaggagctaaacgctacgaaagaaacccaaagtagtgaacaaactgatgga
catcaagattcagaatgtgacatttatgaaagtgactcagacgccgaatcacaagaaggc
ggggaacaacgtgaaagtggagatgggcaagaagaggaaaaaccacagaagaagttggac
gatgacgaggacagacgtaacccacagtatataccaaaacgaggaacgttttacgagcat
gatgatcgtacaactgatgaagtaactgagaataacacagaacagcaaacaaatgcaaaa
gaaaccaaggaaaagaaggtgtggaaagataaggaagatagatgggaccacgaccgatac
aatgacgaagagcaagctccaaaaagacctgaggaattgatagcaacgtatggttatgat
attagaaatgaagaaggaccacctagagctagaaggagaagaagatatggtcgtggacct
aacaagtacacaaggaattgggaggatgaagacgcttatggaaagactacaattggtaga
ggaaataacagacgcttccataaaaataacgaagattttcccgctcttggtaatagtaag
aatactccaaacaaagtagaggaacctgtgatttcgtcagcttggtatagcagcaagaat
aaaacacagagtaaaacccaaaacttcccaccgcttcaatcccaacaggataatgcaaaa
actaagcctgctattgcttccaatacatccacaagtgaaaataaggtgtcagatgaatcc
actaatacatcctggaaaaaggacggtagacacattactcaaaatcaaaatacaaatgga
aactctggttctggcggtgatgcagaaaagttgactaataccaagccattatcaagggag
aataacaagaggaacacccaggagtctgtaagcttggtcgcgagtaggacgcgtggaaga
ggtttcaagtccaatgctaataacaacatggtcactaacagaatagttgagaataaagta
aaaggacgcggcccgggtccggttacaatagagaatcgaaggaataataccgcgcagcac
aatgaagagcatcagcttgcacatgatatgaaacaacaacttaatattaatgatggtagt
cagtatcatcaacctgcacgacacaacaaaggttttttcacatccgccaatcaacacaga
tcaaacacagtacctcctagaatgcaacaacaacaacaacaacaacaacaacaacagcaa
tcacatcaacaacaaacacattcgccgcagcaaacattacagcaacagcaacagcaggat
agttctggaaatagacctaaacgatattccagtcttcgtcaacgacctactattacggaa
acttctgcacaacagaattatccatctcaacatgcccaacatggatattttccacctcaa
gctggaaattcaagagccgttctagaatctcaaggttatccccaaagtcattttgaacaa
tcttctccggtcgctccagccacagcacccatggcagggcaacctgttatttctctgccg
cctggtggacaagctgctagctacgcgccaccaccattcttagtaccaccaccgcaattc
ataccacctcaaacagcaccacctagtataattaattacgttcccggtccaaatggcccg
acatttccaccaaactttcaaggctatcagggatataatccttcagtacagcctcagggt
ccaccgccgccccaagaattgttccaaccgcaaggatgtacttactatagtcctgcgcaa
caacagcagcaacagcagcaagcagctcctttgcggcgaccgaaagcagcgatacctatt
cttccaccacctgataatcagcaaagcggtcgaggaagaggtagaagcactcagtatcag
aataatcaatctagcagtaacacgcaacaacagactgaacaagaagccaagagtggtaac
atggtggaaagtgacgagaaacctgtgccgggacaattcgacagtgtgcaaattgagcag
ccgaacacattgaatcaggaaccccagaaggatcaagatacggaaacgatcagaacagtg
aacgatatggacgagaaggtagagataattaccaatgctgactctcatataaatattgat
gcgtcacccgttaaaaaagataacttggacgatagcgtcagtgttaaggaactattagaa
gcgacttctaatgaaaagaatacggtttcgcacagtccaacgacattggctagcgtcgag
actgaattaggtaacattgaatccgcgattcccgaaagtaccattgttgagaaagctgca
gcctaa
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integrated database retrieval system