KEGG   Trachymyrmex cornetzi: 108768622
Entry
108768622         CDS       T11212                                 
Name
(RefSeq) protein CASC3-like isoform X1
  KO
K14323  protein CASC3
Organism
tcz  Trachymyrmex cornetzi
Pathway
tcz03013  Nucleocytoplasmic transport
tcz03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tcz00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    108768622
   03015 mRNA surveillance pathway
    108768622
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tcz03019]
    108768622
Messenger RNA biogenesis [BR:tcz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     108768622
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 108768622
NCBI-ProteinID: XP_018374625
UniProt: A0A151IU60
LinkDB
Position
Unknown
AA seq 801 aa
MSDTRRRRKSNQSCGSDDLSDSYEELNATKETQSSEQTDGHQDSECDIYESDSDAESQEG
GEQRESGDGQEEEKPQKKLDDDEDRRNPQYIPKRGTFYEHDDRTTDEVTENNTEQQTNAK
ETKEKKVWKDKEDRWDHDRYNDEEQAPKRPEELIATYGYDIRNEEGPPRARRRRRYGRGP
NKYTRNWEDEDAYGKTTIGRGNNRRFHKNNEDFPALGNSKNTPNKVEEPVISSAWYSSKN
KTQSKTQNFPPLQSQQDNAKTKPAIASNTSTSENKVSDESTNTSWKKDGRHITQNQNTNG
NSGSGGDAEKLTNTKPLSRENNKRNTQESVSLVASRTRGRGFKSNANNNMVTNRIVENKV
KGRGPGPVTIENRRNNTAQHNEEHQLAHDMKQQLNINDGSQYHQPARHNKGFFTSANQHR
SNTVPPRMQQQQQQQQQQQQSHQQQTHSPQQTLQQQQQQDSSGNRPKRYSSLRQRPTITE
TSAQQNYPSQHAQHGYFPPQAGNSRAVLESQGYPQSHFEQSSPVAPATAPMAGQPVISLP
PGGQAASYAPPPFLVPPPQFIPPQTAPPSIINYVPGPNGPTFPPNFQGYQGYNPSVQPQG
PPPPQELFQPQGCTYYSPAQQQQQQQQAAPLRRPKAAIPILPPPDNQQSGRGRGRSTQYQ
NNQSSSNTQQQTEQEAKSGNMVESDEKPVPGQFDSVQIEQPNTLNQEPQKDQDTETIRTV
NDMDEKVEIITNADSHINIDASPVKKDNLDDSVSVKELLEATSNEKNTVSHSPTTLASVE
TELGNIESAIPESTIVEKAAA
NT seq 2406 nt   +upstreamnt  +downstreamnt
atgtcggatacacggcgacgtcgtaaatccaaccagtcatgcggttccgacgatctctcc
gattcgtacgaggagctaaacgctacgaaagaaacccaaagtagtgaacaaactgatgga
catcaagattcagaatgtgacatttatgaaagtgactcagacgccgaatcacaagaaggc
ggggaacaacgtgaaagtggagatgggcaagaagaggaaaaaccacagaagaagttggac
gatgacgaggacagacgtaacccacagtatataccaaaacgaggaacgttttacgagcat
gatgatcgtacaactgatgaagtaactgagaataacacagaacagcaaacaaatgcaaaa
gaaaccaaggaaaagaaggtgtggaaagataaggaagatagatgggaccacgaccgatac
aatgacgaagagcaagctccaaaaagacctgaggaattgatagcaacgtatggttatgat
attagaaatgaagaaggaccacctagagctagaaggagaagaagatatggtcgtggacct
aacaagtacacaaggaattgggaggatgaagacgcttatggaaagactacaattggtaga
ggaaataacagacgcttccataaaaataacgaagattttcccgctcttggtaatagtaag
aatactccaaacaaagtagaggaacctgtgatttcgtcagcttggtatagcagcaagaat
aaaacacagagtaaaacccaaaacttcccaccgcttcaatcccaacaggataatgcaaaa
actaagcctgctattgcttccaatacatccacaagtgaaaataaggtgtcagatgaatcc
actaatacatcctggaaaaaggacggtagacacattactcaaaatcaaaatacaaatgga
aactctggttctggcggtgatgcagaaaagttgactaataccaagccattatcaagggag
aataacaagaggaacacccaggagtctgtaagcttggtcgcgagtaggacgcgtggaaga
ggtttcaagtccaatgctaataacaacatggtcactaacagaatagttgagaataaagta
aaaggacgcggcccgggtccggttacaatagagaatcgaaggaataataccgcgcagcac
aatgaagagcatcagcttgcacatgatatgaaacaacaacttaatattaatgatggtagt
cagtatcatcaacctgcacgacacaacaaaggttttttcacatccgccaatcaacacaga
tcaaacacagtacctcctagaatgcaacaacaacaacaacaacaacaacaacaacagcaa
tcacatcaacaacaaacacattcgccgcagcaaacattacagcaacagcaacagcaggat
agttctggaaatagacctaaacgatattccagtcttcgtcaacgacctactattacggaa
acttctgcacaacagaattatccatctcaacatgcccaacatggatattttccacctcaa
gctggaaattcaagagccgttctagaatctcaaggttatccccaaagtcattttgaacaa
tcttctccggtcgctccagccacagcacccatggcagggcaacctgttatttctctgccg
cctggtggacaagctgctagctacgcgccaccaccattcttagtaccaccaccgcaattc
ataccacctcaaacagcaccacctagtataattaattacgttcccggtccaaatggcccg
acatttccaccaaactttcaaggctatcagggatataatccttcagtacagcctcagggt
ccaccgccgccccaagaattgttccaaccgcaaggatgtacttactatagtcctgcgcaa
caacagcagcaacagcagcaagcagctcctttgcggcgaccgaaagcagcgatacctatt
cttccaccacctgataatcagcaaagcggtcgaggaagaggtagaagcactcagtatcag
aataatcaatctagcagtaacacgcaacaacagactgaacaagaagccaagagtggtaac
atggtggaaagtgacgagaaacctgtgccgggacaattcgacagtgtgcaaattgagcag
ccgaacacattgaatcaggaaccccagaaggatcaagatacggaaacgatcagaacagtg
aacgatatggacgagaaggtagagataattaccaatgctgactctcatataaatattgat
gcgtcacccgttaaaaaagataacttggacgatagcgtcagtgttaaggaactattagaa
gcgacttctaatgaaaagaatacggtttcgcacagtccaacgacattggctagcgtcgag
actgaattaggtaacattgaatccgcgattcccgaaagtaccattgttgagaaagctgca
gcctaa

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