Trachymyrmex cornetzi: 108768831
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Entry
108768831 CDS
T11212
Name
(RefSeq) putative DNA helicase Ino80 isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108768831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcz03036
]
108768831
Chromosome and associated proteins [BR:
tcz03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
108768831
INO80 complex (yeast)
108768831
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
HDA2-3
ResIII
DUF7842
Motif
Other DBs
NCBI-GeneID:
108768831
NCBI-ProteinID:
XP_018374954
LinkDB
All DBs
Position
Unknown
AA seq
1662 aa
AA seq
DB search
MCADCQISHRRVMSDRANRMKLEAEMAAPLHLQRLERSLNVQPFLKQIDDLFQEQASEDD
KSVSSESSDGSDAYLDNVPTRKEEARINKLRLYNMSSVGEERRWLQDILLSDSSDSSASG
SDTDSQITEEDFQEMLKFHILRKKYQGRFYQKPENIQYQYYSAGLLSNYDRFLEHQKLIV
GNKKKKEKKPEKKIMKIKKEKINRHCVSEEYRKGEYPEGEWDKSIPREEELDESELEAIM
RHQPRGRGRKKHNTKSVEVMTMRRRKIWVMMSKKELGKVQRAKTNNHKEMLISCKKVAQH
CMKYWRQKAMQSQKNMKDTIWRAKRLTREMQSYWKRYDRVERETRRRLEKEAEEQRKMDV
ELIEAKRQQRKLNFLITQTELYAHFMSRKIDKASAEEQLRILNQLDEEKNPRLIGIDDYD
SEIMKQKAKRNATEAFNNEKARTKQFDTSQIAVSQELRLSDTPENLEHPQPSIFKGNLKG
YQLKGMNWLANLYDQGISGILADEMGLGKTVQSIAFLCHVAERYSVWGPFLIISPASTLH
NWQQEMARFVPVFKVVPYWGNPQERKILRQFWDTKDLHTKEASFHVVITSYQLVITDYKY
FNRIKWQYMILDEAQAIKSTSSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMP
TLFDSHDEFNEWFSKDIESHAENKTGIDEKHLSRLHMILKPFMLRRIKKDVENELSDKIE
VMVYCPLTTRQKLLYSALKKKIRIEDLLHYTVGGGDTASNDKNFTSNLMNLVMQFRKVCN
HPELFERRDAKSPFFMNTEFYNMPALLYNEGLLHLAFPSKDHLLYNRLFIFTAEYIHRAL
HCNEDSRENIFSFSRFIDLSPMEMNKTFIAGTLFRLCLITLMERRLRMVQYWENWHVDNR
SRTSTNQMFYLPKKFDGLSTTLQDIFFTSKIIEGEAFYTHTNHTIHSMPETVAHRILRSS
KKANQLLKLQRILPTGKIDQTEDSKLALLPEHPHHPRQPVMRYCQQTTIPAFVCDNNPKV
QASPRKLYVSNSSAACAWKRHEECGGPFGQRLLWLGCERALSEEKLGIRASQTMSTFCYQ
PQGGLSACAPINGWSHIIVPDKQTLVTDAGKLSVLDSLLRRLKEQGHRVLIYSQMTKMID
LLEEYMYHRKHTFMRLDGSSKISDRRDMVADFQKRADIFVFLLSTRAGGLGINLTAADTV
IFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISG
GNFKPDTLKPKEVVSLLLDDEEIEAKYSQRSEERKQQRAEEVRFESNLQHKERDRKRKLT
ALPVKNDAKKPCHTDANGDKNNDTIYVNLNEPKPAINLIQSQHQNNHHQQLENIDNYSTP
TSPTKSEDETSNEGLVVDVDGPVTVSGNDPHGQPRGNLHQFGESPAKIARLGHFAFGMGA
NARMRQSVRGASKRGRPRGSRRGGPIGGKGRGLLLMHPSSKVSNMASEPSSTAMSPNDGG
GCSNEVLRHWTPAISDPADGDGPSTVGPLGPVGSLIPLSGRSGAAGIRRGPGRPRLRPTG
PGHQGYRTPGHHHSKKVQRPLPVPIRSHQTVAGVNQQKASSSSQKRPGMSVTGTSSSSSS
SVAVANSTLLSSSSSSSSSSMSLAESRPFGFYTQQQPRTGSS
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcagattgtcagatttctcatagacgggtaatgtctgatagagcaaacaggatg
aagctagaagctgagatggctgcgcctttgcatctgcagagactggaacgcagcttgaat
gtacagcctttcttaaagcagattgatgatctttttcaagaacaagctagtgaagatgac
aagtctgtctcatcggaatcttctgatggttcagatgcttatcttgataatgtacccacg
cgaaaagaagaagcaagaatcaataagttaaggctgtacaatatgtctagtgtaggagaa
gaaagacgttggttgcaagatattcttttaagtgattcctctgatagttctgcatcaggt
tctgacacagatagccaaatcacggaagaagattttcaagagatgttgaagtttcatata
ttacgaaaaaaatatcaaggtcgtttttatcaaaaaccagaaaatatacaatatcaatat
tatagtgcgggtttattatccaattacgatagatttttagagcatcaaaagttaattgtg
ggaaataaaaagaagaaagagaaaaagccagaaaaaaaaattatgaaaattaagaaggaa
aaaattaatcgtcactgcgtatctgaggaatatcgtaaaggggaatatccggagggagaa
tgggataaatcaattcctagagaagaagagttagatgaatctgaattggaagctatcatg
cgtcatcaacctcgaggtagaggtaggaaaaaacataatactaagagtgttgaagtgatg
acgatgagaagaagaaagatatgggtgatgatgtccaaaaaggaactaggaaaagtacaa
agggcgaaaaccaataatcataaggaaatgctaataagttgtaagaaagtagcgcagcat
tgtatgaaatattggaggcaaaaagccatgcaatcgcagaaaaatatgaaggatactatc
tggcgggcaaaacgtttgacaagagaaatgcagagttattggaaacgttatgatcgagtc
gaacgggaaactagaagaagattagagaaagaagctgaagaacaacgtaaaatggatgta
gaacttattgaagcaaaacgtcaacaaaggaaattaaatttccttattactcagacagaa
ttgtatgctcattttatgtcgcgaaaaatagataaagcgtcagcagaggaacaattaaga
atcttgaatcaattagatgaagaaaagaatcctagacttattggcatcgatgattatgat
agtgaaatcatgaaacaaaaagcaaagagaaatgctactgaagcatttaacaatgaaaag
gccaggaccaaacaatttgatacatctcaaattgctgtatctcaagagttacgtctcagt
gatacgcctgagaatttggagcatccacaaccttccatttttaagggaaatctgaaaggt
tatcaattaaaaggaatgaattggttggcaaatttgtatgaccagggtattagtggaata
ctagctgatgagatgggtctgggaaaaactgtacaatccatagcatttttatgtcacgtt
gccgagagatattctgtttggggaccatttttaattatatcacctgcttcaacattacat
aactggcaacaagaaatggcaagatttgtgccagtatttaaagtagttccatactggggt
aatcctcaagaacgtaaaatactcagacaattttgggatactaaggatttacacacaaag
gaagcttctttccatgtagtaataacaagttatcaattagtaattacggattataaatat
tttaatagaataaaatggcagtatatgatcttggatgaagcacaagctataaaaagcacg
agcagcatgagatggaaattgttattgggatttagttgtcgtaatagattattgctcagt
ggtacgcctatacaaaatagcatggcagaactatgggcgttattacattttattatgcct
acactattcgattcgcacgatgaatttaacgagtggttttccaaagatattgaaagtcac
gcagaaaataaaacaggaatagacgaaaaacacttatcgagacttcatatgattttaaaa
ccttttatgttacgaagaataaaaaaggatgtagaaaatgaattatctgataagattgaa
gtaatggtatattgtccacttacaactcgtcaaaagttactttattcagcgctgaagaaa
aaaattcgaatagaggatttgctgcattatacagtgggcggaggggacactgcatccaat
gataaaaactttacttccaatctaatgaatctagtcatgcagttccgaaaggtctgcaac
catccagaactttttgaacgtagggacgctaaatcgccattttttatgaacactgaattt
tataatatgcctgctttattgtataatgaaggacttttgcatctagcatttccatccaaa
gatcatctattatataataggttgtttatatttactgcagaatatattcatcgtgctctt
cactgcaacgaagattcgcgcgaaaatatattttcatttagtagatttattgatctatct
ccaatggaaatgaacaaaacgtttatcgctggtactttatttagattatgtctgataacg
cttatggaaagaagattaagaatggtgcaatactgggaaaattggcacgtcgataacaga
tcgagaacatctacaaatcaaatgttttatttacccaaaaaatttgacggtctgtcgaca
acgttgcaagatatattctttaccagcaagataatcgaaggcgaagctttctatacacat
accaatcatacgatacattcaatgccagaaactgtcgcccacagaatactacgtagtagt
aaaaaagctaatcagttattaaaattacaaaggatattacccactggtaaaatagatcaa
acagaagattcgaaattggctttgcttcctgaacatcctcatcatccacggcaacctgta
atgcgatattgccaacaaacaacgattcctgcctttgtttgcgataataatcccaaggtt
caagctagtccacgaaaattatacgtcagtaatagttccgcagcatgtgcctggaagagg
catgaggaatgtggtggtccattcggtcaaagattactttggctcggttgtgaacgagca
ctttctgaagaaaaattgggtattcgtgccagtcaaacaatgtctacgttttgttatcag
ccgcaaggtggattatctgcgtgtgctcctattaatggatggtcacatatcattgtacca
gataaacaaacgttagtgacagatgctggtaaactttctgtactggacagtcttttacgg
cgtctgaaagaacaaggtcatagagtactgatctattctcaaatgacaaaaatgattgac
ttgctagaggaatatatgtatcatagaaaacatacatttatgagattagatggttcgtca
aaaatctcagatcgtcgggacatggtggcagattttcaaaaaagagcggacatattcgtc
tttcttctcagtactagggctggcggcttgggaatcaacctcactgcggcagacacggta
atattttatgatagtgattggaaccctactgtagaccaacaagctatggatcgcgcccac
agactggggcagaccaaacaagttacggtctaccgattaatatgtaaaggaaccatcgaa
gaacgaattttgcagagagcgcgtgaaaagagcgagattcaacgtatggtcataagcggc
ggaaatttcaagcccgatactttgaaacctaaagaagtcgtgtcgctgctattggatgat
gaggaaattgaagcgaaatacagccaacgaagcgaggagagaaagcagcaacgagcggag
gaggttcgcttcgagtcgaacctacagcacaaggagagggaccggaagaggaagttaacc
gcgcttccggtcaagaacgatgcaaaaaagccatgtcacacagatgctaatggcgacaaa
aacaacgatactatttacgttaatcttaatgagcctaaaccggctatcaatctgattcaa
tcgcagcaccagaacaatcaccatcagcagctagaaaatatagataattatagcacaccg
accagcccgaccaagtcagaagatgaaacgagcaacgagggactcgtggtcgatgtagac
ggtccggtgacagtttccggtaacgaccctcatggacagcctcgaggcaatctccaccaa
tttggagaatctccagctaaaatcgcccgacttggacatttcgccttcggcatgggtgcg
aacgcgcgaatgcgacaatccgtacgcggcgcgagcaaacgcggtcgaccgcgaggttct
cgtagaggaggaccaattggcggtaaaggaagaggactgcttttaatgcatccgtcgtcg
aaggtttcaaatatggccagtgaaccgtcatcgacagcgatgtcaccgaatgatggaggc
ggatgctctaatgaagtattacggcactggacgcctgcgatttccgatcctgcggacggg
gatggtcccagcacggttggtccattaggtccagttggcagtttgatacctctatcggga
cgcagtggagctgcagggatacgtcgtggccctggtcggccccgattacggccaactggg
cctggacatcagggctatcgcacccctggtcatcatcatagtaagaaggtccagcggccg
ctgccagtacccatcagatctcatcaaacggtcgcaggtgtcaatcagcaaaaagcatct
tcatcgtcgcagaagcgtcctggcatgtcggtgactggtacctcgtcttcgtcgtcgtct
tcagtcgcagtcgcgaattcgacactgttatcttcatcatcgtcatcgtcatcatcctca
atgtcgttggcggaatcacgacctttcggattttacacgcagcaacagccacgcacagga
tcatcgtag
DBGET
integrated database retrieval system
