Trachymyrmex cornetzi: 108769104
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Entry
108769104 CDS
T11212
Name
(RefSeq) WD40 repeat-containing protein SMU1
KO
K13111
WD40 repeat-containing protein SMU1
Organism
tcz Trachymyrmex cornetzi
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcz03041
]
108769104
Spliceosome [BR:
tcz03041
]
Complex B
Other components
Complex B specific factors
108769104
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
EIF3I
ANAPC4_WD40
Beta-prop_EML
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
LisH_TPL
Beta-prop_RIG_2nd
Beta-prop_ACSF4
NBCH_WD40
Beta-prop_VPS8
Beta-prop_TEP1_C
Beta-prop_Nup120_160
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_Aladin
Ge1_WD40
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_IP5PC_F
PROPPIN
WD_LRWD1
DUF7165
VPS8_N
WD40_like
LisH_WDR26
LisH_PAC1
zf_topless
Motif
Other DBs
NCBI-GeneID:
108769104
NCBI-ProteinID:
XP_018375413
UniProt:
A0A195DCZ9
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MSIEIESADVIRLIQQYLKESNLVKTLQTLQEETGVSLNTVDSVDGFVADINNGHWDTVL
KAIQSLKLPDKKLIDLYEQVVLELIELRELGAARSLLRQTDPMIMMKQQEPERYIHLENL
LARSYFDPREAYPDGSTKEKRRAYIATALAGEVSVVPSSRLLALLGQALKWQQHQGLLPP
GTTIDLFRGKAAVRDQEDEKYPTQLSKQIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMEQAVLSMSFSRDSEMLAGGGQDGKIKVWRVQSGQCLR
KFEKAHSKGVTCLQFSRDNSQILSASFDTSIRVHGLKSGKTLKEFRGHSSFVNEVVFSSD
GHNIISASSDGTVKIWSLKTTECIGTYKSLGAADLTVNSIHTLPRNPEHFVVCNRSNTVV
IMNMQGQIVRSFSSGKREGGDFVTTVVSPRGEFIYCVGEDLVLYCFSTSSGKLERTLNIH
EKDVIGLAHHPHQNLLCSYSEDGLLKLWKP
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcgaaatagagtctgccgatgtaatccggttgatacagcagtatcttaaagag
tcaaatcttgtcaagacgctgcaaaccttacaggaggaaacaggtgtgtcgctgaatact
gtagacagtgtggatggatttgttgcggatataaataatggccattgggacacagttctg
aaagctatacagtcattaaaattacctgacaagaaactcatagacttgtacgaacaggtt
gttttagaattaattgaactacgagaattaggtgcagcacgttccttattaagacagact
gatcctatgattatgatgaaacaacaagaacctgagagatacattcatttagagaattta
cttgcacgttcgtatttcgatccgcgcgaggcatatcccgatggaagcacgaaggaaaaa
cgaagagcatatatagccaccgctctcgctggtgaagtatcggtagtaccatccagcaga
ttgctcgctctgttgggacaagcgttgaagtggcagcaacatcagggtctactaccacct
ggcaccacgatagacttgttccgaggaaaagcggcggttcgtgaccaagaagacgagaaa
tatccaacgcaattgtctaaacaaatcaaattcggccagaaatcacacgtagagtgcgcg
cgtttctcgcccgatggccaatatttggttaccggttcagtggacggttttatcgaggtg
tggaacttcacgaccggtaaaattagaaaagacttgaaatatcaggcgcaagacaacttt
atgatgatggaacaagcggtcctttcgatgtcgttcagtcgtgacagcgaaatgttggcg
ggcggtggtcaggatggtaaaattaaggtttggagggtacagagtggacagtgtttgagg
aaattcgagaaggcgcattcgaaaggcgtgacttgcctacagtttagtagagataacagt
caaatattgtcagcctcgttcgatactagtataagggtacacggtcttaagtctggaaag
actctcaaggaattccgtggtcactcttcatttgtgaacgaagtcgttttttcttcggac
ggtcataatataattagcgcatcgtcggatggaaccgtgaaaatttggagcttgaaaacc
accgaatgcataggcacttacaaatcattgggagccgctgatctcacagtgaacagtata
cacacccttcctcgaaatccggagcacttcgtcgtgtgcaatcggtctaacacagtagta
attatgaatatgcaagggcaaatagtgagatcgttctccagcggtaaacgagagggaggt
gactttgtaactacagtggtgagtccgcgaggcgagtttatctattgtgttggtgaagat
ctcgtactgtactgtttttccacgtcgtcgggaaagctcgagagaacgctcaatatacac
gagaaggacgtaatcggcttggcgcatcatccccatcaaaatttattatgttcttacagc
gaggacggtctgctaaaactatggaaaccataa
DBGET
integrated database retrieval system
