Trachymyrmex cornetzi: 108769251
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Entry
108769251 CDS
T11212
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz04140
Autophagy - animal
tcz04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108769251
04148 Efferocytosis
108769251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcz04131
]
108769251
Membrane trafficking [BR:
tcz04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
108769251
Hops complex
108769251
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
zf-C3HC4_2
zf-rbx1
zf-RING_2
zf-C3H2C3
zf-C3HC4
zf-RING-like
TPR_11
Beta-prop_WDR36-Utp21_1st
zf-RING_5
zf_RING_Vps8_fungal
TFIIA
Motif
Other DBs
NCBI-GeneID:
108769251
NCBI-ProteinID:
XP_018375627
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MAFLEWRRFNFFDLKKEVDAGKIATAFGDAQVAAATSGNGNLVFGDNIGNVHLINRLYEI
TTFRAYEITLILAQQVQHSTFLFTIGEDEPGCNPTIKVWNLAKPDKQGNPTCVRISRAIP
SYRAVPPTALCVHTSLTLMAIGFGDGSIMLYRGDLTRERKNKIKVLKDANLSITGLAIRA
TGKQTYLFVATQNSVFLYNITVKDKEFKSTLDTMGCARKCSVLAESMQDSHFMIGRNDAI
YCYTPDGRGPCYAVEGQKIMLEWFRTYLVIVAKEAANVPRTTTTISAKPNTIEPIPPGVD
KHIITVLDIQNKFIVFSAPMVSVQAVLSEWGGFFILSGDNKLYHLDEKDLQSKLALLFKK
NLYDVSIRIAKNQQYDAEGLIDIFRQYGDHLYSKGDHNGAIEQYIKTIGKLEPSYVIRKF
LDSQHIDNLTTYLQALHKNGQATEDHTTLLLNCYTKLNHTDKLKEFIMTKDREVDFDVEI
AIKVCRQASPEDALLLAQKHGKHEWYLRIQIEDKQEYKKALEYMATLEFEEAEANMKKYG
NILIENVPNESTQFLKALCTNYKPSNKPLVDQEALNGYTEQRVDKASPEDFIHLFLNNSE
RLVEFLEHLVKSDTRWSTLIYNTLVEHYLHVWSALDNDVAKLQYEQKVVRLLQNSEARYD
KDQILILCHQHNFRKGLLFLYEESKLYQEILRFHLCEGDSEQVLATCKRFGHQDPNLWVQ
ALWSVAKNKDAPTKLLADILAYIAQERLLSPLMVIDAISTSLTCTLGDVRSYLCSVLRTE
NEQTQADTELTEKYRADTLKLREQIEAIKNNTIIFQGSRCSACHHQLELPSVHFMCQHSY
HQHCFQSFSENENECPACLPNNKKLLDIIRAQEQSRDLHETFHSLLDRAEDPFSLVADYF
GRGVFKKLTVITDTDKSLPTPTKLEEPKLNYGPGAEARLRLNEGKSSISGKIEPRRAGYD
VPTLITEERFRNFVKPDVYSSSLEANISGTGSGLSTPRGNSAKASPVPIREARILNNTTP
KSSPIDKSFVSKTPIVPSNPFETDDYDESKNPFANDDDDDDANNPFKDDDDNDNDRAGND
DDDYNRNLNPFGR
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttctggagtggagacgctttaatttcttcgacttgaagaaggaagttgacgcg
gggaagatcgcaacagcgttcggggatgcgcaagttgcggcagctaccagtggcaatggc
aatctggtattcggggataacataggcaatgtacatttaataaacaggttgtacgaaatc
acaacctttcgagcttatgaaatcactctgatattggcgcagcaagttcaacactccact
tttctgtttactattggtgaggacgagcctggatgcaaccctaccataaaggtttggaat
ttggccaagcctgataaacaaggtaatccaacatgcgttcgaataagcagagctatacct
agctacagagcagttccaccaacagctttgtgtgtacatactagtcttacattaatggct
atcggatttggggatggctctataatgttgtacagaggcgatctgactcgagaaagaaag
aacaaaataaaagtcttgaaagacgccaatctgtctattactggcctcgcgatacgagca
actggtaagcagacgtatctgtttgttgctacgcaaaacagcgtattcctgtataatatt
accgttaaggataaggaatttaaatctactttggatactatgggttgcgcgcgaaaatgc
agcgtgctcgccgagtctatgcaagacagtcactttatgatcggacgtaatgacgctatt
tattgttacacaccagatggtagaggtccgtgttatgcagtggagggtcaaaagataatg
ctagaatggttcaggacttatttggtgatagtggccaaagaagcggcgaatgtcccaaga
acgacaacaactatatctgccaaacccaacacgatagaaccgatacctcctggtgtcgat
aagcatattattactgtgcttgacattcaaaacaagtttatcgtgttctcggcgccgatg
gtgtctgtccaagcagtcttgtccgagtggggtggattttttatacttagtggagataat
aaattgtatcatttagatgagaaagatttacaatctaaattagcgttgctttttaaaaag
aatttgtacgatgtttctataagaatagctaaaaatcagcaatatgatgcagaaggtctt
atagacattttccgtcaatacggagatcatttatattccaagggggatcataatggcgct
atagaacaatatataaagactataggcaaattggagccgtcttacgtgataagaaaattt
ttggattctcaacatatcgataatttgacgacgtatttgcaagcgctgcataaaaacgga
caagcaacagaggatcataccactttgctattaaattgttacactaagcttaatcatacc
gataagttaaaagaatttattatgactaaagatcgtgaagttgattttgacgtggaaata
gcgataaaagtttgccgacaagcatcgccggaggatgccctactacttgcacagaaacac
ggtaaacacgaatggtatcttcgtattcaaatcgaagacaaacaagaatataaaaaggct
ttagaatacatggcaaccttagaattcgaagaggcggaagctaatatgaagaaatatgga
aatatcttaatagaaaatgtgccaaatgaatccacacagtttttgaaagccttgtgcaca
aattataaaccatccaacaaacctcttgtagatcaggaagctttaaatggttatacagaa
caacgtgttgataaagctagtccagaagattttattcatttatttctaaataattctgaa
cgacttgtagagttcttggagcatttagttaaatcagatacaagatggagtacacttatt
tacaacaccttagtggaacattatttacatgtttggtcggcattagataacgatgtagct
aaattacaatatgaacagaaagttgtacgacttctgcagaattccgaagcccgttatgat
aaagaccaaatattaatactttgtcatcaacataatttcagaaaaggattacttttcctt
tacgaagaaagcaagctataccaagaaatattaagatttcatttatgcgagggagatagc
gaacaagttctcgctacctgcaaaagattcggtcaccaggatcctaatctatgggtacaa
gctttatggagtgtagctaaaaacaaggatgcaccaacaaaacttctcgcggatatatta
gcttatatcgctcaagaaagactattatctcctttaatggtcattgacgcaatttctaca
tcattgacctgcacactgggagacgttagaagttatttgtgcagtgtattacgaacggaa
aatgagcaaactcaagctgacacggaattaacagagaaatatagagctgatactcttaaa
ttgcgggaacaaatagaagcaataaagaataatacgataatttttcaaggatcacgatgt
agcgcgtgccatcatcaattggaattgccatctgtgcatttcatgtgtcaacattcctat
catcaacattgttttcaaagcttttcggaaaatgaaaacgaatgcccggcctgcttgcca
aataacaaaaaattactggatattataagagcgcaagaacagtcaagagatttacatgaa
actttccacagtcttctcgatcgagcagaagatccattttccttagtagccgattatttt
ggtagaggcgtttttaaaaaattaacagtaatcactgatacagacaaatcattacctacg
ccgaccaagttggaggaacctaagttaaattatggtccaggtgcagaagcgagactcaga
ttaaatgaaggaaagagttctatttcaggaaaaatagagccacgacgagctggatatgac
gttcccacattaataacggaagagcgtttccgtaattttgtcaagccagacgtgtattct
tcatcgttggaggcgaatatatcaggaacgggaagcggtttatcgacgccacgcggtaac
tctgctaaagcttcgccggtgccgattagagaagcccgcatcttaaacaatactacacca
aagtcatcgccaatcgacaagtcctttgtttcgaaaacccctattgtgccatcaaatccc
tttgaaactgacgattatgatgaatctaaaaatccctttgctaacgatgacgatgatgac
gacgcgaataatccttttaaagacgatgatgataatgataatgatcgggctggtaacgat
gacgacgattacaacagaaatctaaatccattcggtaggtaa
DBGET
integrated database retrieval system
