Trachymyrmex cornetzi: 108769872
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Entry
108769872 CDS
T11212
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108769872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcz03019
]
108769872
Messenger RNA biogenesis [BR:
tcz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108769872
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR
TPR_MLP1_2
Nucleoprot-TPR
ZapB
ATG16
YabA
Motif
Other DBs
NCBI-GeneID:
108769872
NCBI-ProteinID:
XP_018376594
LinkDB
All DBs
Position
Unknown
AA seq
2362 aa
AA seq
DB search
MEVVEESDHNVLLEIANDEELTQIPRELVRKINVHFNNRFEEFITAKAVFETNRKCLEQN
LEKAQKELAEQKLDLEEYKGKLELTEKTNIEICSNLEEVKIEVHRLQESVKRLEKENSEL
RRQRDIATDEASALQLQVERRDTEIERMRTELSSLSNQLQSAIAAKCQTLADTEEIRSRE
MTLDFKEKRLEQERVLLSQQMAGLEEELARRTSELQTARSESSARALLIDTKLSQREEEL
RIANEANSQLRESVSSLQKQSDELAQKVEQQRAHEIAINDSYQKEINAQKNLASLYESMK
DDANAKAEALSNAASELQKLVDSTAEEYGTLETKYNQLLVQHKQDIDDKEQNIQELTKEL
ENANELLKNIQQEKLNQAVEQLAPAAAVTSRVLRKGLSLTQIYTQLVEVTNDLNLEREEN
ERLKSQMDVILRELEQKAPLLQQQRQDYETAMANITTLTNRLDDLLAENQRLHENSDEAN
RLSKHHSTENQRLKTELSDLARQVCYLLKEVQESRTNTHMETRNLSSSIDTGDISSSQII
SKKLVTFKDIEELQENNQKLLAIVRALSSRQEEMERATDEINSGEMKEKLDRYMEQLTEM
QVAQDRQSKMLDGLLKQRDMYKNMYQHMKNSNEKKEQVDKDIEEGKSKSEEESKTTKSDE
EKEKLLKKLKEAEDQLKHISDEYEIYRKERTAHEKMLSEEVERLRKEAESNSARCCRLRA
QLDSANERFSLLQGNVASYKSQIKALEEKCTNYNITISKHEQSIMILKDETLAAQTRLSR
AEVQLENLRQERQLLRDTEGRLLKEREVYQRERQTQALLKADMESIKASLERVQAEGQLR
AEQRLDDANRECAALRRRLQEEQDRFRELAGHLERQLTTAQERLKEERELCERLRMELDQ
ARETETQSSQKIDQLNNKLRQAAAHSITKPLTGDEGLVKRVKELEIQLNISQVEINSLSE
QLKAARQQSQQYCDIAESAETQLTELTTEYNKCKEELENALKESRVEIISLQKRVKELGD
DLAKISNGRQETDSELRDRLAEAERKIEELDELKGELELLKTDLKSASIAVKEAEDKYTR
EMLQHSSDLQILTKLKEEAQHVQQRLDVLTLERNAAMQALEVEKSASKEREQKLVNEVEE
TQKRIMDLDTQNVLLHNQIQELGDRVAIMQSQQTKISSGRDSPDTSLEALNKSFSSLEED
SKSVEQLLRVMKYLRREKDLAIAKTDVLRAENLRLKSQVEIVEKRLKETETSLNSEREKS
EINVMTTSKHAELLRKVETLNAITDSNRILREERDSLSVKVNELTTKVNSLSEEVVPLRD
ISRDLTAKTEALTEENTSLKGEATRWRQRANTLLERANKASPEDWRRLQTERENLSKLLT
SERETHTKRTEEFNQVKTEKAKLEEQLTQLQRQIQTQDEHMSRASEEVRKLGQELNEALA
DSSSKAKDLASLRKELSDKDAILNDVKNKEIQIRKIAKKYKTQFEELAKSVEEEKNRNEE
IRNEDASGVATQEREDQLREEGRQELRQANIELTTKIDEVTRQIVVAQSEADNLRKEIEA
MNRSSVEKEERAKQVLKGARTKIMQLTESKKICEKELLDLKSRIESTGGSAGVQGDSDTE
HDARLVALKSQMEGRMSRLEHEKSEIQAEKEALLQRVAQLQRQLSGVSGVSATTEPPTAN
IKPMSARAETPLASIRPMSVVVQSRTAAVLPTTAGAPVMVAPHQVQQQQVVHTTETSSPT
SSLTDFQPASTSTSSQSAQTSSLRQLVVQPQLSESAESTQREDPESAETLNLQPQQQQCQ
QQQQQQQQTVALVSPRVEQQQQQQQITVSDQQQTVASSSTQSVSTSQASTGLKRPRGRDS
TASGSGIVEGLDHGRQEQVQSPKTKRIRPDISATASASASEVEYQVPTSSQRDQDEEVEE
GCVVVVDCDEGEGGGNHQAQEEEEFDNDTYEEIEEEEEMPYEVEVEVERDNNEVEIIMEE
DSTSVEISRQGQAIIPANQQQSEAISSAGPTAEPATSFTAMSSRGIAPMPRQQQQQHLLL
PQQGYEDGGDDCIVPSTPTLFVPRRDGFGEAVSSPQVPQGRFTFGDSSAPTTASSTPSLT
TSTGSNTRIFGSTNSAVVQESLDDSRMDLTQLEDGGTGRSVPTTPLQVSPAADLPPSTSS
SQSEEQESTVTHVTVTVTSGDNIEDSNIPSIHIVGVDDQQRGSTEATESSATPSEEVSSE
GEKREEEPVVLASGEDDAVDTAEATEEAGSELVEEEVEEENREAEASPSSNTRQRTMAAS
LAAASDANNARGMTVRRSPRSPFPPRARGARPTPIVWGETQSGRGQPVMRGHAARGVANE
GGRGRGTRGRRMRSKYPYARYS
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggtcgaggagagcgatcataacgttcttcttgagattgcgaacgacgaggag
ctaacacaaatcccgagagaattagtgagaaagatcaatgtacattttaataacagattt
gaggagttcattaccgccaaggcggttttcgagacgaaccgaaaatgcttggagcaaaat
ttggagaaggcgcagaaagaacttgcagaacagaagttggatcttgaagaatataaaggg
aagttagagctcacggaaaagaccaatatagaaatttgtagcaatcttgaggaagtgaaa
atagaagtacacagattacaggaatctgtcaaacgattggagaaggaaaatagtgaatta
cgtagacaaagagatatagccacagatgaggcaagtgcactgcagctgcaagtggaaaga
agggatactgagatcgaaagaatgcgtaccgaattatcatctttaagtaatcagcttcaa
tctgccattgcagccaagtgtcaaactctggctgacacagaggaaattcgtagtcgagaa
atgaccttggacttcaaagagaaacgactggagcaagaacgagtgcttctctcccaacaa
atggcaggccttgaagaagagttggctaggagaacgtctgaacttcagacagcaagatct
gaatcttccgccagagctcttttaattgatactaaattatcccagcgcgaggaagaattg
cgaatagccaatgaagccaattctcaactgcgagaatcggtttcttctcttcaaaaacag
tccgatgaactggctcagaaagtggaacaacagcgtgcccatgaaattgctataaacgat
tcctaccaaaaagaaatcaatgcgcagaaaaatctagctagcttatacgagtcgatgaag
gatgatgctaatgctaaagccgaggcactttctaatgcagcaagcgagctacagaaactt
gtggatagcaccgcggaagaatatggaacattagagacaaagtacaatcagttactggtc
caacacaaacaagatattgatgacaaagaacaaaatatccaggaactgacaaaagagtta
gaaaatgctaatgaattattgaagaatattcaacaagagaaattaaatcaagcggtagaa
caattggcaccagcagcagctgtaaccagtcgagtgttacgaaaaggtttaagcctcacg
cagatttacacccaattagttgaagtcaccaatgacttaaatttagagcgtgaagaaaat
gaacgcttgaagtctcagatggatgtaattcttcgcgaactggagcagaaggcaccgtta
ttgcagcaacaacgtcaagattatgaaacggctatggcgaatattacgaccctaacaaac
aggctggacgaccttctcgcagagaatcaacgtcttcatgaaaattccgatgaggctaat
cgtctttccaagcatcattctacagaaaatcaaaggctgaaaactgaattgtctgactta
gctagacaagtatgttatctgctcaaagaagtccaagaaagccgcaccaacactcacatg
gaaacgagaaatttgtcttcttctatagacacaggtgacatctcgtcatcgcaaatcatt
agtaaaaagttggtaacatttaaagatatcgaggaattgcaggagaacaaccagaagctc
ttagcaattgtccgcgcattatcatccagacaagaagaaatggagcgagccaccgatgaa
ataaattcgggcgaaatgaaggagaagctagatcgttacatggaacaattgacagagatg
caagttgcgcaagataggcagtcaaaaatgttggatggtctcttaaagcagagagacatg
tacaaaaacatgtatcaacacatgaagaattccaatgaaaagaaggagcaagtggataaa
gatatcgaagagggcaaatccaaatcagaagaggagtcaaagacaacgaaaagtgatgaa
gaaaaagaaaagttgctcaagaaattaaaggaagctgaagatcaattgaaacatatttcg
gatgaatacgagatatatcgcaaagaacgaactgcgcatgaaaagatgttgagtgaagaa
gttgaaagactcagaaaggaagcagaatcgaattcggcgaggtgttgcagacttagggcg
cagttggactcagcgaatgagagattctcacttttgcagggtaatgtcgcttcatacaaa
tctcagatcaaagcacttgaggagaaatgcaccaattacaacatcaccattagcaaacat
gagcaaagtattatgatactaaaagatgagacgctcgccgctcaaactcgcttatctcga
gcggaagttcaactagaaaatcttcgtcaggaacgtcaacttttgcgggacaccgaggga
cgtctcttaaaggagcgagaagtttaccaaagagaaagacagactcaagcattgcttaag
gcagatatggagtctattaaggctagcttggagcgagtccaggctgaaggacagcttagg
gccgagcagagactcgatgacgccaacagggaatgcgctgctcttcgacgtcgtcttcag
gaagaacaggatcgcttcagagaattggcgggtcatttagagagacagttgacgactgct
caagaaagactaaaagaagaacgcgaattatgtgagagattgagaatggagttagatcaa
gcgagagagactgaaactcagagtagtcaaaaaattgatcaattaaacaataaattaaga
caagcagctgcccattccatcactaaacctttgacaggtgatgaaggtcttgtgaagagg
gtaaaggagttggaaatacaattgaatatctctcaggttgaaataaattcactctccgaa
cagttaaaagcagcaagacaacaaagtcagcagtattgtgacattgcagagagcgcagaa
acacagttgacagagttgacaactgaatataacaaatgtaaagaagagctagagaatgct
cttaaagaatcacgtgtggagatcatttcattgcaaaaaagagtgaaggaattgggtgat
gacctggcgaagatatcaaatggtaggcaagaaaccgattcggagctgagggatagattg
gctgaagctgagagaaagattgaagaactcgatgagttgaaaggtgaattggagttgtta
aagacagatctgaaatctgcttctatcgctgtcaaagaagcagaagacaaatacaccaga
gaaatgctgcagcattcgtccgatttgcagattttgacaaagttgaaagaggaagctcaa
catgttcagcagcgacttgatgttttgactctagaacgaaatgcagcaatgcaagctttg
gaagttgagaaatcagcctcaaaagaaagagaacagaagcttgtgaatgaggttgaagaa
actcaaaagagaattatggatcttgatacgcagaatgtacttctgcacaatcagattcag
gagttgggtgatcgagtagccatcatgcagagtcaacagacaaaaattagcagcggaaga
gacagtcctgatactagcctggaagctctaaataagagtttcagttctttggaggaagac
tccaaatcagttgaacaattgttgagagttatgaaatatttaagaagagagaaggatttg
gccatagccaaaaccgatgttcttagagctgaaaatctcagattaaaatcacaggtcgag
atagtggagaagcggttgaaagaaactgaaacttcgctaaattccgaacgagagaagtcc
gagattaatgtaatgaccacatccaagcatgcagaattgctgcgcaaggtggagacttta
aatgccatcactgattctaatcgaattctcagggaagaaagagatagtcttagtgtgaaa
gtcaacgaacttacaaccaaagtgaactctttatcggaagaggtagtacctcttcgagat
atatccagagatttgacagccaaaacagaagctttgacagaagaaaatactagcttgaaa
ggcgaagcaaccagatggaggcaaagagcaaatacgttattggaaagagcgaataaggct
agccctgaagactggcgacgacttcaaactgaaagagagaacctaagtaaattgttgacg
tcagagagggaaactcatacaaagagaaccgaagaattcaatcaagtgaaaacagaaaag
gcgaaactcgaggagcaactgacgcaattgcaaagacagatacaaactcaagatgaacat
atgtcgcgagcatcagaagaggttcgcaagctgggtcaggagcttaatgaggcactagcc
gattcttcttcgaaggcgaaggatttggcttcccttaggaaggagttaagtgataaggat
gccattcttaatgatgttaaaaacaaggaaattcagatccgcaaaatagctaaaaagtat
aaaacgcaatttgaagaactcgcgaaaagcgtcgaggaagagaagaatcgcaatgaggaa
atcagaaacgaggatgcttccggtgtggcaacacaagaacgcgaagatcaactgcgagag
gaaggccgccaggaacttcgccaagcgaacatcgagctcacgacgaagatagatgaggta
actcgccaaatagtagtagctcaaagtgaagctgataatctgcgaaaagaaattgaagcc
atgaatcgcagcagtgtagagaaggaagagagagcgaaacaggtgcttaagggcgccaga
acgaagattatgcaattgacagagtctaagaagatctgcgagaaagaattattggatcta
aaatccaggatagaatctacgggaggcagcgccggagttcaaggagattctgatacagag
catgacgcacgattagtggcactgaaatctcagatggaaggtcgcatgtctagattggag
cacgagaaatcagagatacaggcagaaaaggaagcgcttttacagcgggttgctcaactc
caaagacagttatcgggagtaagcggggtaagcgcgactacggagccaccaacagcgaac
attaaaccgatgtctgccagagcggaaacaccattggccagcattagaccaatgagtgtg
gtggtgcagtcgcgaacagctgcagttttaccaactacagctggtgcaccagttatggtt
gcgccgcatcaggtgcagcaacaacaggtagtacacactacagagacgagctcgccgact
agcagtctgaccgacttccaaccagcgagcaccagtacttcttcacaaagtgcacaaacc
agtagtctccgtcagttagtggtgcaaccacagttaagtgaatcggcggagtcaacacag
agagaagacccagaaagtgcggagacacttaatttgcagccgcaacagcaacaatgccag
cagcagcaacaacagcagcaacaaacagtagcgctagtgagtcccagagtagagcaacag
cagcagcagcagcagattactgttagtgatcagcaacagacagtggcgagtagctccaca
cagtcggtcagtacttctcaagcttccacgggactcaagagacctcgaggtcgagactca
accgcctctggttccgggatagttgaaggattggaccatggacgtcaggagcaagtgcag
agtccgaaaacaaagaggatcagaccggatatcagcgcaaccgcgagtgccagcgcttcg
gaagtggaatatcaggtgcctacgtcaagtcagagggatcaagacgaagaagtagaagaa
ggatgcgtagtagtggtggactgtgatgaaggtgaaggtggaggcaatcatcaagcacag
gaagaggaggaatttgacaatgatacgtatgaagagatagaggaagaggaagaaatgcct
tatgaagtcgaagtcgaagttgaacgagacaataatgaggtggaaattattatggaggag
gattccaccagtgttgaaatctctagacaaggccaagcaattattcctgcaaatcagcaa
cagtccgaagccataagtagcgctggaccaaccgccgaacccgccacgtccttcacagcc
atgtcctctagaggaatcgcgcccatgcccagacagcagcaacagcagcatcttcttttg
ccacaacaaggttacgaagatggcggtgacgactgtatcgtaccaagtacacctactctc
tttgttcctcgtcgcgatggtttcggtgaagctgtgagttctccgcaggtgccgcaaggg
cgtttcacttttggagactcttcagcacctacgacagcttcctcgacaccgtctttgaca
acatccacaggctctaacactaggatctttggttcaaccaattctgctgttgtccaggaa
agcctggatgacagtagaatggacctgacacagctggaggatggtggaactggtcgcagt
gttcccacgacaccgcttcaggtttccccagctgcggatttacctccttcgactagtagc
agccaatctgaagaacaagagagcaccgtaacacatgttactgtaacggtcacttctgga
gataatattgaggactctaacattcccagcattcatattgttggtgttgatgatcaacaa
cgaggttccactgaagctacagaatctagcgcaactccaagcgaagaagtgagctcggag
ggtgaaaagagggaagaagaaccagtagttttagcatccggagaggatgatgccgtggac
acggcagaagcgacggaagaggcaggaagcgaacttgtcgaagaagaagtcgaggaggag
aatcgggaagcagaagcatcgccgtctagtaacacacgacaaagaacaatggcagcgagt
ctggcggcagcaagtgacgccaataatgccagaggaatgacagtgagaagatcgccaaga
tcaccctttccaccgagggcaagaggtgcgagacctacaccaattgtgtggggcgaaact
cagtcgggtagaggacagcctgtgatgcgaggacatgcggctagaggggtcgctaatgag
ggaggacgaggacgaggaacacgaggccgacgaatgcgctcgaaatatccttatgcccga
tattcgtaa
DBGET
integrated database retrieval system
