Trachymyrmex cornetzi: 108770004
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Entry
108770004 CDS
T11212
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
tcz Trachymyrmex cornetzi
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcz03036
]
108770004
03400 DNA repair and recombination proteins [BR:
tcz03400
]
108770004
Chromosome and associated proteins [BR:
tcz03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
108770004
DNA repair and recombination proteins [BR:
tcz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
108770004
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
HEAT_GCN1
FliT
TEDC1
Motif
Other DBs
NCBI-GeneID:
108770004
NCBI-ProteinID:
XP_018376792
LinkDB
All DBs
Position
Unknown
AA seq
1210 aa
AA seq
DB search
MAEIIYPQGCRSVTEDLGPDELIRRLKTLAHTLQAMGQDEGMYQQYIPLALHLAEEHFLM
HQSKDVQLLIACCIADVLRVYAPEAPYKDADQVKTIFLFLIKQLAGLKDPKDPAFKRYFY
LLENLAYVKSFNMCFELEDCQEIFCALFSLMFRIVNDEHSGKVKSFMLDVLCPLITESDI
VSNELLDIILMNIVEPNKSQKKNAYLLAKELVIKCSDTLEPYIQAFFNHVLILGKEEKSL
QICKKVYDLIYELNHICPSVLLSVLPQLECKLKSSSENERLGAVALLARMFSEKGSQLAV
QHTQLWRAFLGRFNDISVAIRIKCVQYSMHFLLNHPELRKDITDTLKLRQHDADESVRYE
VVMAIVTTARRDFEVVSDSEDLLEFVKERTLDKKFKIRKEAMSGLAMIYKKHLNDADVPQ
ATKKAVIWIKDKILHGYYMAGMEDRLLVERLLNTCLVPYQLQAEERMKKLYHLLGTIDDH
ASKAFVELQKHQLAVRRAVVEWIEVAKKTDAKNELMAKVHQISRFLPDPMKVQEFLQKFS
THMKRDTRLLQEMETIVQPNVSCKECAETITKVLKKLGQPVMTNLYYNTIKMLLERVSSV
MIDEEAIRVLIGYVLDCLKGGNVIEEVGLNPNNAGEKGLRLLVMLSFVFGPHFLHNDILM
QLVNLLELEDEMVAPLVLSIFTFLGKYKPLCDVAPDIMNLMVPICKNFAETGTPKQAKQA
VRCLFVNMTNIHDTIFPEIIERIKNTLTPTSEYYRTSIVTLGHIAYNLPDKYQVQIKNMV
SRKIVKELLVKESSEQSSEIIDGDWCREDQLPEETRCRLEGLKCMARWLLGLKTDVLSAQ
KTFRMLNAFMVNKGDLLSQGRLSKAEMSWLRLQAGCSMLKICEQKGVGDQFTAEQFYNLS
QLMVDEVPQVREAFGSKLHKGLGRGIPNKCLPLDFMGYYALAGKEQDKRLKCVLKTYMQT
DINKRRDYVKTLSLGTVERAMDQLPHILPDYMLVFAVPILAHDPEFTSHVMVSQLKVIQQ
CLWFILEPLITKNEYYCYGFYRNLVERMKSHKDALKPEDNEMNYKLWAVCDLAMNVIYTK
TTNFDMKEFPSETRIPTMYFKRTDETLNNHKNYLPAELQVSMTNPKGKGSFHNTHTVNER
PQRKAKSKQQKEVGIGPNETDARLQVGEMECIDAQPAEASETRIQLPGLEEEIEEPPAKR
ALRESDKVNK
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaataatatatccgcaagggtgcagatcagtcactgaagatttaggtccagat
gaattaattaggagactcaagacactagcacacacgttgcaagctatgggacaagacgaa
ggaatgtatcaacaatacataccactggcattacatttggcagaagagcatttcctgatg
catcaaagcaaagatgtacaactgctgattgcttgctgcattgcagatgtcttaagagtt
tatgcgccagaggctccttataaagatgctgatcaggtcaaaacaatatttctgttcctt
attaaacaactggcagggttaaaagatcctaaagatcctgcttttaaacggtatttctat
ctacttgagaatttagcttatgtcaagtcatttaatatgtgttttgagcttgaagattgt
caagagattttttgcgcattattttctcttatgttcagaattgtgaacgatgaacattct
ggtaaagttaaaagcttcatgctagacgttttatgtccactcattaccgaatcggacatt
gtcagtaacgaacttctggatattatactcatgaacattgtagaaccaaataaatcacag
aaaaagaacgcatatttgcttgctaaagagctagtaatcaaatgtagcgatacattagaa
ccatacattcaagcgtttttcaatcatgtcttaatattgggaaaggaggagaagagttta
caaatttgcaaaaaggtatacgatttaatttatgagttgaatcacatttgtccgagtgtc
ttgctgtccgtcctcccacaactagaatgtaaattaaaatcctcctctgagaatgaaaga
ttgggcgccgtggcgttactggcaagaatgttctctgaaaagggctcgcaattagccgta
cagcatacgcaattatggagggcatttttgggacgatttaacgatattagtgtggccatt
cgtattaagtgtgtgcagtattcaatgcattttttgctaaatcatcctgaattgaggaag
gatatcacagatactttgaaactgaggcaacacgatgctgatgaaagtgtccgttatgaa
gtcgttatggctatcgtgacgactgctagacgagactttgaagttgtgtcggacagtgag
gatctactcgaatttgtcaaagaaaggactttggacaaaaagtttaaaatacgaaaagag
gcaatgtctggcttagctatgatatacaagaaacatctgaacgatgctgacgtaccacag
gccacaaagaaagcggttatttggataaaagataaaatattacatggttattacatggcg
ggcatggaagatagattgttggtggaaagattgctaaatacgtgcctagtaccttatcag
ttgcaagctgaagagagaatgaaaaaattataccatctcttaggtacaattgacgatcac
gcttctaaagcttttgtggaacttcagaaacatcaacttgcggtgcgaagggcagtagtt
gaatggatagaggtcgcaaaaaaaacagacgctaaaaatgaactaatggcaaaagttcat
cagatatcacgtttcctaccagatcctatgaaagtacaggagtttcttcaaaagtttagc
actcatatgaagagagataccagattattacaggaaatggaaacgattgtgcaaccgaat
gtttcctgtaaggaatgcgctgaaaccataactaaggttctcaaaaaattaggacagccc
gttatgactaatctatactataatacaattaagatgctgctcgaaagagtaagctctgtc
atgattgatgaagaagcaattcgggttttgatcggatacgtcttagattgtttgaaagga
ggtaatgtgatagaagaagttggtcttaatccaaataacgccggagaaaaaggattgaga
ttactagtgatgctttcatttgtattcggcccgcatttcctgcataatgatatcttgatg
caacttgtcaatttacttgaattggaggatgagatggtagcaccgttagttctctctatc
tttacgttcttgggaaaatataaacctctatgtgatgtagcaccagacattatgaatctt
atggtaccgatctgtaagaatttcgctgagacaggaacaccgaaacaggcaaagcaagct
gtgagatgtctgttcgtcaacatgaccaatattcatgatacaatttttcccgagatcatc
gagagaattaagaacacactgacgccgacgtcggagtattatcgaacgtctatagttaca
ttaggtcacatagcatataatttgccagacaaatatcaagtacaaataaaaaatatggtg
tccagaaaaatagttaaagaattactagtgaaggaaagcagcgagcaaagctccgaaatt
attgacggagattggtgcagagaggatcaattacccgaagagacacgatgcagattggaa
ggtttgaagtgtatggcgcgttggttattaggattgaagactgacgtattgtcagcgcaa
aagacatttagaatgctgaatgcttttatggtgaacaaaggtgacttgttatctcaggga
cgcttgagtaaagctgaaatgagttggttaagattgcaagctggttgctcaatgttgaaa
atatgcgaacaaaagggtgttggtgatcaattcactgcagaacaattttacaatctttcg
caacttatggtggatgaagttcctcaagtcagagaagcttttggtagtaaattgcacaaa
ggtttaggaagaggaattccaaacaaatgcttaccattggatttcatgggatattacgct
ctggctggcaaggaacaagacaagaggttaaagtgtgtattgaagacatatatgcagaca
gacataaataaaaggagggattacgtgaagactctttcattgggtactgtcgagcgggct
atggatcaactgccccacattttgccggattatatgttagttttcgcggtacctattctc
gcacatgatccagaatttacgagtcatgtgatggtgagccagttgaaagttattcaacaa
tgtctttggttcatcttggaacctcttattacaaagaatgaatattattgctacggattt
tatagaaatcttgtagaacgtatgaagagccataaagatgcattgaagcctgaggacaac
gaaatgaattataaattatgggctgtttgtgacttggcaatgaacgtaatatacaccaag
actactaatttcgatatgaaggagtttccgagcgaaacgcgaattcctacgatgtatttt
aaacgaacagatgaaacgttaaataatcataagaattacttacctgcggaattacaagtg
agcatgacaaatccaaaaggaaagggatcattccacaatacacacacggttaatgagaga
ccacagcgcaaggctaaatccaaacaacagaaggaagtaggcatcggacctaatgaaacg
gatgcaaggctgcaagttggcgaaatggaatgtattgatgcacagcctgcggaagcatca
gagaccaggattcaactgcctggtttagaagaagagatcgaggaaccaccagcgaagagg
gcattaagggaatcggataaagtaaataaataa
DBGET
integrated database retrieval system
