Trachymyrmex cornetzi: 108770026
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Entry
108770026 CDS
T11212
Name
(RefSeq) pinin isoform X1
KO
K13114
pinin
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03013
Nucleocytoplasmic transport
tcz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108770026
03015 mRNA surveillance pathway
108770026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcz03019
]
108770026
03041 Spliceosome [BR:
tcz03041
]
108770026
Messenger RNA biogenesis [BR:
tcz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108770026
Spliceosome [BR:
tcz03041
]
Complex C
Other components
EJC/TREX
108770026
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_memA
Pinin_SDK_N
Viral_alk_exo
RSB_motif
Motif
Other DBs
NCBI-GeneID:
108770026
NCBI-ProteinID:
XP_018376821
UniProt:
A0A151IR12
LinkDB
All DBs
Position
Unknown
AA seq
377 aa
AA seq
DB search
MRKLDCQELWGADRLEAQLEVARDGLRGLDRSIRKILGRDLPDGESGPLQSRIPQKRLLQ
EDRRRAITEFMNNELAGGKRRWQGSNAEPKTVFSRLSARVPSTADDSADEDDNITKPAVS
SRVIATPREIPSRQEVIRRERTDERSRQRNKRMFGALLGTLQKFRQEETKLKAKEDKKAE
VEARVEEARRREKEELRKERQQLFLSRKRQLAEVRALEAKLARSRQFQDWRNAQLPLALF
IKTHTQPSIYYIPKRKHPQTDMLLAQSTKELHEEIEKREKTLVEELNIIEVQIGLNKHSQ
NFEASSSLHTVEAPRLLEEGEENRDPNPEHNIEAAINDSNDNADISIESVINENCDDHAE
KKEEVQLDQVQHDVNNG
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaattagattgtcaagagttatggggagccgacagattagaagcacagttagaa
gttgcccgcgatggacttcgtggtctcgatcgcagcattcgtaaaattttgggccgtgat
cttcctgatggcgaaagtggtccattgcagtctagaatacctcaaaaacgactattgcaa
gaagatcgtcgaagagctataacagagttcatgaataatgaattagcaggaggcaaacga
cgttggcaaggttctaatgcagaaccaaaaacagtttttagtcgattaagtgcacgtgtt
ccatctactgcagatgatagtgctgatgaagacgataatattaccaagcctgctgtatca
tccagagtaatagctactcctcgagaaattccttcacgtcaagaagttattagacgagaa
agaacagatgagcgtagtcgacaaagaaataaacgaatgtttggtgcacttttaggtact
ttacaaaaatttagacaagaggaaactaaactcaaagcaaaggaagataaaaaagcagaa
gtggaagctagagtagaagaagctagaagacgagaaaaagaagaattgcgaaaagaaaga
caacaattgtttttgtcacgaaaacggcaattggctgaagtgcgagcattggaagcaaag
cttgcacgtagtcgacaatttcaagattggcgcaacgcacagttacctcttgctttattt
attaaaacacacacacaaccttctatttattatataccaaagcgtaaacacccacaaaca
gacatgttattagcgcagtccacgaaagaacttcatgaggaaattgaaaaaagagaaaaa
acattggttgaagaattaaatataatagaggttcagatagggctaaacaaacattcacaa
aactttgaagcatcttcatctttacatactgtagaagctccacgtttactagaagagggt
gaagaaaatcgagatcctaatccagaacataatattgaggctgcaatcaatgatagtaat
gataatgctgatatttcaatagagtctgtaataaatgaaaattgtgatgatcatgcagag
aaaaaggaagaagtacaattggaccaagttcaacatgatgtaaacaatggctag
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