KEGG   Trachymyrmex cornetzi: 108770026
Entry
108770026         CDS       T11212                                 
Name
(RefSeq) pinin isoform X1
  KO
K13114  pinin
Organism
tcz  Trachymyrmex cornetzi
Pathway
tcz03013  Nucleocytoplasmic transport
tcz03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tcz00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    108770026
   03015 mRNA surveillance pathway
    108770026
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tcz03019]
    108770026
   03041 Spliceosome [BR:tcz03041]
    108770026
Messenger RNA biogenesis [BR:tcz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     108770026
Spliceosome [BR:tcz03041]
 Complex C
  Other components
   EJC/TREX
    108770026
SSDB
Motif
Pfam: Pinin_SDK_memA Pinin_SDK_N Viral_alk_exo RSB_motif
Other DBs
NCBI-GeneID: 108770026
NCBI-ProteinID: XP_018376821
UniProt: A0A151IR12
LinkDB
Position
Unknown
AA seq 377 aa
MRKLDCQELWGADRLEAQLEVARDGLRGLDRSIRKILGRDLPDGESGPLQSRIPQKRLLQ
EDRRRAITEFMNNELAGGKRRWQGSNAEPKTVFSRLSARVPSTADDSADEDDNITKPAVS
SRVIATPREIPSRQEVIRRERTDERSRQRNKRMFGALLGTLQKFRQEETKLKAKEDKKAE
VEARVEEARRREKEELRKERQQLFLSRKRQLAEVRALEAKLARSRQFQDWRNAQLPLALF
IKTHTQPSIYYIPKRKHPQTDMLLAQSTKELHEEIEKREKTLVEELNIIEVQIGLNKHSQ
NFEASSSLHTVEAPRLLEEGEENRDPNPEHNIEAAINDSNDNADISIESVINENCDDHAE
KKEEVQLDQVQHDVNNG
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgaggaaattagattgtcaagagttatggggagccgacagattagaagcacagttagaa
gttgcccgcgatggacttcgtggtctcgatcgcagcattcgtaaaattttgggccgtgat
cttcctgatggcgaaagtggtccattgcagtctagaatacctcaaaaacgactattgcaa
gaagatcgtcgaagagctataacagagttcatgaataatgaattagcaggaggcaaacga
cgttggcaaggttctaatgcagaaccaaaaacagtttttagtcgattaagtgcacgtgtt
ccatctactgcagatgatagtgctgatgaagacgataatattaccaagcctgctgtatca
tccagagtaatagctactcctcgagaaattccttcacgtcaagaagttattagacgagaa
agaacagatgagcgtagtcgacaaagaaataaacgaatgtttggtgcacttttaggtact
ttacaaaaatttagacaagaggaaactaaactcaaagcaaaggaagataaaaaagcagaa
gtggaagctagagtagaagaagctagaagacgagaaaaagaagaattgcgaaaagaaaga
caacaattgtttttgtcacgaaaacggcaattggctgaagtgcgagcattggaagcaaag
cttgcacgtagtcgacaatttcaagattggcgcaacgcacagttacctcttgctttattt
attaaaacacacacacaaccttctatttattatataccaaagcgtaaacacccacaaaca
gacatgttattagcgcagtccacgaaagaacttcatgaggaaattgaaaaaagagaaaaa
acattggttgaagaattaaatataatagaggttcagatagggctaaacaaacattcacaa
aactttgaagcatcttcatctttacatactgtagaagctccacgtttactagaagagggt
gaagaaaatcgagatcctaatccagaacataatattgaggctgcaatcaatgatagtaat
gataatgctgatatttcaatagagtctgtaataaatgaaaattgtgatgatcatgcagag
aaaaaggaagaagtacaattggaccaagttcaacatgatgtaaacaatggctag

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