Trachymyrmex cornetzi: 108770427
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Entry
108770427 CDS
T11212
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108770427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcz03019
]
108770427
Messenger RNA biogenesis [BR:
tcz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108770427
mRNA degradation factors
5'-3' decay
Lsm complex
108770427
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
108770427
NCBI-ProteinID:
XP_018377509
UniProt:
A0A195EJI4
LinkDB
All DBs
Position
Unknown
AA seq
138 aa
AA seq
DB search
MNETNELPPGTASLLEELEKKLMVLLRDGRTLIGYLKSVDQFANIVLQSTIERIHVGQEY
GDIPRGIFIVRGENVVLLGEIDIEKEKVLPLKKVTVDEILDAQRREQESKQEQKKRINKA
LKERGFAYIPDLSHDDMY
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaactaatgagttgccaccggggacagcatcgctacttgaggaacttgaaaaa
aaacttatggttttattgagagatggcagaacgttaattggctatcttaaaagtgtcgat
caatttgctaacatagtacttcaaagtaccattgaaagaattcatgttggtcaagagtat
ggtgacattccgagaggtattttcatagtaagaggggagaatgttgtgcttttaggagaa
atagatatagagaaggaaaaagtgttgccattgaaaaaggtgacggtggatgaaattttg
gatgctcagaggcgcgaacaagaatctaagcaggagcagaaaaagcgaataaacaaagct
ctgaaagaacgaggttttgcatatataccagatttaagtcacgacgatatgtactga
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