Trachymyrmex cornetzi: 108770616
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Entry
108770616 CDS
T11212
Name
(RefSeq) DNA topoisomerase 3-alpha-like
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03440
Homologous recombination
tcz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108770616
03460 Fanconi anemia pathway
108770616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tcz03032
]
108770616
03400 DNA repair and recombination proteins [BR:
tcz03400
]
108770616
Enzymes [BR:
tcz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
108770616
DNA replication proteins [BR:
tcz03032
]
Eukaryotic type
DNA Topoisomerases
108770616
DNA repair and recombination proteins [BR:
tcz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
108770616
FA (Fanconi anemia) pathway
108770616
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Zn_ribbon_GRF_2
EF-hand_Zip
Zn_ribbon_FGT1_2
Motif
Other DBs
NCBI-GeneID:
108770616
NCBI-ProteinID:
XP_018377798
LinkDB
All DBs
Position
Unknown
AA seq
1103 aa
AA seq
DB search
MAFFKSCTIALNCTIYYGLKSKASNLSSKNLGYTFCLLRQYRSKSIMKVLSVAEKPDAAK
NIAGYLSHGTSRRREGFSKYNKIFEFNVQLWGQNCQMLMTSVSGHLLGYDFTNAYRKWHS
CHPLSLFDAPVSKRCMEENYENIKRTLEREARFCNALIIWTDCDREGENIGFEIIQVCQA
VKSNIRVYRAKFSEITRPSVERALQNLAQPDKAMSDAVDVRSELDLRIGAAFTRFQTLRL
QKVFPNTLGDLLISYGSCQFPTLGFVVERFLAIDRFKSEPYWKLKVMDDREGISVEFRWA
RVRLFEKIPCQIFLDMCLEQPEATVEKVTCKPKSKWRPLPLDTIELEKQGSRKLRINAKE
TMRIAERLYTQGFISYPRTETNIFPKELNLRSLVEQQVNNQEWGNFAQNLLESGITPRQG
KKSDQAHPPIHPIKYTDNLYGNEAKVYEFVVRHFLACLSKNAEGRETLVEIDIAGEKFKA
NGLEIIAKNYLDVYIYETWNNKQIHSYEQRQVFRPTSIDMMEEKTSAPNLLTEAELIALM
DKHGIGTDATHADHIDTIKSRQYVGLTDTQHFMPGKLGIGLVMGYDNMGFQMSKPHLRAD
LEKDLQLICENKKNPNEVLQNQINKYREVFQVAIERANLIDDSLAHYLDERPLQTEQIQL
NTPVVTSIFKCPKCGSDMVLKQRRQGRGKYITCMGYPECTNVIWFPEAVEDVEVLNETCN
RCTENIHKLKFKLVRNMIPMYGTSHTTCIGCDTVFNEMLNIKEDCIKQTGRTNYTVHNNT
RDTLNSTSSTSQSTSNTFQSRSIQPVSNSTGFVRNNNNVGLIGTSAISSDRPNTQNQNSN
ISQPNSSNRSNTVNRSTISDNRENHFSWINTRDFNNPENRASQSTFRNSRNTNNVKDIWG
NTDNNAEIICHCHETAIQLTVRKDGPNKGRLFYKCAKPQGSGCNFFLWGSDSAESNTENE
HSTWGSSWNRNNDSAGHFSGAGTSNNDWGNPSTNDVMCNCNQPARKLMVHKDGPNKGRHF
YGCPKGVNSTCNFFKWADEDDTNDSHMDWSNSTARGIGNKARSKFSQRGNAPKRPKLTGG
KRKCGNCGLEGHTRKKCPNNAMD
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggctttttttaagtcttgtaccattgcattgaattgtacaatatattacggtctgaaa
agcaaagccagcaacttatctagcaaaaaccttggttatacgttttgcttgttaagacaa
taccgttcaaagagcatcatgaaggttctcagtgttgctgaaaaacccgatgctgctaaa
aatattgctggttatttatcgcatggtaccagcagaagaagggaaggtttctccaagtac
aataagatcttcgaatttaacgtgcaattatggggccaaaactgtcaaatgctgatgaca
tctgtgtctggccatttattaggctatgattttacaaacgcctatcgtaaatggcacagc
tgtcatccattaagcttattcgatgctccagtatctaagcgatgcatggaagagaattat
gaaaatattaagagaaccttggagcgagaagcacgattctgcaatgcattgattatttgg
acagattgtgacagagaaggagagaacataggttttgagattattcaagtctgtcaagca
gtcaagtctaatatccgtgtatatagagcaaaattctcagaaattacgagaccgtccgtt
gaaagagctctgcaaaatttggcacagccagataaggcgatgagcgatgccgtagatgta
agaagtgaattagatttacgaataggtgccgcgtttacgaggtttcagaccttaagatta
cagaaagtgtttcccaacactcttggagatctgctcattagttacggaagctgccagttt
ccaacgcttggatttgtagtcgaaaggtttcttgccatcgatcgcttcaagtctgaacca
tattggaaactaaaagtgatggacgatcgcgaggggatatctgtagaattcagatgggcc
agggtaagattatttgaaaaaattccttgccaaatatttctggacatgtgcttggaacag
ccggaagctacagtggaaaaagtaacatgcaaaccaaaaagcaaatggagacctctaccc
ctggatactattgaattggaaaagcaaggctcccgtaagttacgcataaacgcgaaagag
acaatgaggatagcggagagattatacactcaaggtttcattagctacccacgtacggaa
acgaatatatttccgaaggaattgaatctaagatctttagtagagcagcaagtaaacaat
caggaatggggtaactttgcgcaaaatttactagaatctggaataactcccagacaagga
aagaaaagcgatcaagcgcatcctcctattcatcccataaaatataccgacaatttatat
ggaaacgaagcaaaggtctatgaatttgtggttcgacattttctggcttgtctgtcaaag
aatgcggagggccgagaaacactggtggaaattgatatagcgggagagaaattcaaggct
aacggtcttgaaatcatagcaaagaattatctcgatgtgtacatatacgaaacatggaat
aacaagcagattcactcttacgagcagcggcaagtttttcgaccaactagtattgatatg
atggaagagaaaacttcagcaccaaatttattaaccgaagctgagttgatcgcactaatg
gacaaacacggcatcggtacggatgctactcatgctgaccatattgataccatcaaatcc
aggcaatatgtaggcttaacagatactcaacattttatgccaggcaaattgggaattggt
ttggtcatgggttacgataatatgggctttcaaatgtccaagccgcatttgcgtgcggat
ttagaaaaagatttacaactgatatgcgagaataaaaaaaacccaaatgaagtattacaa
aatcaaattaataaatatcgcgaagtgttccaagtggctatagaacgcgccaatttgata
gacgactctttagcacactatctcgacgagagacctcttcaaaccgaacaaatacagctt
aatactccagtggttactagtatatttaaatgtccaaaatgcggctctgacatggtttta
aaacagagacgacaaggcagaggaaaatatatcacctgtatgggatatccagaatgtacc
aacgtgatctggtttccagaagctgtagaggatgtggaagttttaaacgaaacatgcaat
cggtgtacagaaaatatacacaaattaaaattcaaattagtcagaaatatgatacccatg
tacggtacttctcacacaacttgtataggttgtgatactgtgtttaacgaaatgttaaac
attaaagaagattgcattaaacaaactggaagaacgaattatactgttcacaataatacg
agagatacattgaactccacctcaagtacatctcaatctacttcaaatacatttcaatcg
cgaagtatccaaccagtttctaatagtacaggatttgtacgaaataacaacaatgttggc
ttgatcggaacttctgccatatcatccgacagaccaaacacacaaaaccagaattctaat
atttctcagccgaatagctcgaatagatcaaatactgtcaatagaagtacaatatcggac
aatagagaaaatcatttttcttggattaatacaagagatttcaacaatccagagaataga
gcaagtcaatccacgttcagaaattctcgcaatacgaacaatgtaaaagatatatggggt
aatacagacaataatgctgagattatatgtcactgtcatgagactgcgatccaattaaca
gttagaaaagatggaccaaataaaggacgtttattttacaaatgcgctaaaccgcaggga
agtggttgtaatttttttttgtggggatctgatagcgccgagtcaaacacagagaacgaa
cattccacttggggatctagctggaatagaaacaatgatagtgctggtcacttttctggt
gctggcacttctaataacgattggggaaatccgtctacgaatgatgttatgtgtaattgt
aatcagcccgctcgaaagctaatggttcacaaagatggtcctaataagggacgacatttt
tatggatgtcctaagggtgtaaactccacttgtaattttttcaaatgggcagatgaagat
gacaccaatgatagtcacatggactggagcaattccactgcaagaggaataggaaataaa
gcacgtagcaaattttcacaaagaggcaatgctcccaaaagacccaaactcaccgggggc
aaaagaaagtgtggaaattgcggattggaaggtcatacgaggaagaaatgtccgaataat
gcgatggactga
DBGET
integrated database retrieval system
