Trachymyrmex cornetzi: 108770690
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Entry
108770690 CDS
T11212
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz04120
Ubiquitin mediated proteolysis
tcz04137
Mitophagy - animal
tcz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108770690
04120 Ubiquitin mediated proteolysis
108770690
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108770690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcz04131
]
108770690
04121 Ubiquitin system [BR:
tcz04121
]
108770690
03029 Mitochondrial biogenesis [BR:
tcz03029
]
108770690
Enzymes [BR:
tcz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
108770690
Membrane trafficking [BR:
tcz04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
108770690
Aggrephagy
Other aggrephagy associated proteins
108770690
Xenophagy
Other xenophagy associated proteins
108770690
Ubiquitin system [BR:
tcz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
108770690
Mitochondrial biogenesis [BR:
tcz03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
108770690
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
IBR_2
zf-RING_12
ubiquitin
IBR_1
IBR
Rad60-SLD
Rcat_RNF216
MamS_MamX
Motif
Other DBs
NCBI-GeneID:
108770690
NCBI-ProteinID:
XP_018377875
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MSFLFNLVKSAFLGMLRLFWFGKQKMSNSLSIYIKTNTGNTLSVELDPKWDIKNLKEIVA
PRMGIAPEDIKIIFAGKELHDSIIIEECDLGQQSILHAVRTPHKMQDKRRMNVSLIEEST
SETSNLNDSGSKPMNETLMDLPLDESDQQNLSSEEQQESRAHFYVYCSAPCKDVTAGKLR
VKCARCGSGAVTVDRDPQCWPDVLQPRRISVHCESDFCPVTSSMFSDETENQVNYAHFYF
KCAKHPSLGENDEAVPLYLIKPNLRNIPCLACTDVRDTVLVFPCEAGHVTCLDCFREYCT
VRLHERQFEFDPTEGYYTLSCPAGCPNSFIHQIHHFHLLNTEQYERYQRFSAEEHVLRAG
GLLCPQPNCGMGIIPPSTEDDVECRKIQCIGGCGYVFCRICLQGYHVGECESQTSETSTS
IFSSRNYSVDLSKANEAQWDEASKKTIQISTKPCPKCRTPTERDGGCMHMVCTRARCGYH
WCWLCQTEWTRECMGNHWFG
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagctttttgtttaatttagtgaaaagcgcgtttctcggaatgttgcgattattttgg
tttggcaaacagaaaatgtctaattctttaagcatatacattaaaacgaatacaggcaat
actctgtccgtcgaattagatcccaaatgggatataaaaaatctaaaggagatcgttgcg
cctcggatggggattgcgccggaagacattaaaattatatttgcaggtaaagaactgcac
gattcaataataatagaggagtgtgatttaggacaacagagcattttacatgcagtacga
acaccccataaaatgcaagataaaaggagaatgaatgtaagtcttatagaggaatctaca
tcagagacatccaatttgaatgacagtggtagcaaacctatgaatgagacacttatggat
ttacccttggatgaatcagatcaacaaaatttatcctctgaagagcagcaggaaagtcga
gcacatttttatgtgtactgctcggctccctgtaaagatgtgaccgcaggtaaattaagg
gtcaaatgtgcaagatgtggtagtggtgctgtaactgttgatagagatcctcagtgttgg
ccagatgtgttgcaaccaaggagaatatccgtacattgcgaaagtgatttttgtcctgta
acttcaagtatgtttagtgatgaaacggagaatcaagttaattatgctcatttttatttt
aaatgcgctaagcatcccagtttaggggaaaacgatgaagctgtacccctttacctcata
aaaccaaacttgaggaatattccttgtctagcctgcacagatgtcagagataccgtactg
gtatttccatgcgaggctggtcatgtaacttgtcttgactgctttcgtgaatattgcaca
gttcgtttacacgagcgacaatttgaatttgatcctaccgagggatattatacattgtct
tgccctgctggatgccccaattcttttatccatcaaattcatcatttccatctccttaac
acggaacagtatgaaagatatcagagatttagtgcggaagaacatgttttgcgtgctggt
ggtcttttatgtccacaaccaaactgtgggatgggtattataccaccttctacagaagat
gatgtagaatgccggaaaattcaatgcatcggtggatgtggctacgttttttgcagaata
tgtttacaaggttatcacgtaggagaatgcgaatcgcaaacatcggaaacgtccacaagt
attttttcttctagaaattattcagtagacctctcaaaagctaacgaagctcaatgggat
gaagctagcaaaaaaacgatacagatatctacgaaaccttgtcctaaatgcaggactcct
actgaaagagatgggggttgcatgcacatggtatgcacaagagcaagatgtggctatcat
tggtgttggttatgtcaaacagaatggactagagaatgtatgggtaatcattggtttgga
taa
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