Trachymyrmex cornetzi: 108770739
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Entry
108770739 CDS
T11212
Name
(RefSeq) RNA polymerase II degradation factor 1 isoform X1
KO
K12114
vrille
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz04711
Circadian rhythm - fly
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04711 Circadian rhythm - fly
108770739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcz03000
]
108770739
Transcription factors [BR:
tcz03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
ZIP only
108770739
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bZIP_2
bZIP_1
TFIIA
Motif
Other DBs
NCBI-GeneID:
108770739
NCBI-ProteinID:
XP_018377943
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MVAEFVSRQSGSPINGETACLNSNMPATHTMAHSGGHGAPHGGPHDAHGPLTVPLTHPGH
HGGPPSAIQQQHQHQQQQQGPPPQQQQQQPQPHHHHHHQAQQPQPQQQQQQQQQQQQQQQ
QQQHLHHDAAQVTTHPENFPSNFDLRKELFSQRKQREFIPDNKKDDSYWDRRRRNNEAAK
RSREKRRFNDMVLEQRVMELSKENHILKAQLEAIRDKFGICGESVISTEHVLAALPSEPT
ISVKRAKIPPSAALLYARTPSPVHTSVIHQPVSGARSPRSPAQLYVPETTAYPETESFQY
PYSHPAMHHLDTTSALNLSSRGRRAQSPFELSSGSGDEAGPQMVVGSQNNPAANNSLPHK
LRHKSRIGDKDAASALLALQGIKQEPGPRASPPWDEGSSDERDSGISLGAEWTGPTATTV
SESDREVKMKLDRLASEVASLQSIFRLGKPVAAAAAAAAADGLVTGHSAATVSGP
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggtggcagagtttgtctcccgccagagtggatcgcccatcaatggtgagaccgcgtgt
ctgaacagcaacatgccggccacgcacacaatggcccacagtggtggtcacggtgcgccc
cacggcgggcctcacgacgcccacggacccctcacggtgcccctcacgcatcccggccat
cacggcggacccccatctgcgattcagcagcagcatcagcaccaacagcaacagcaggga
ccaccgccgcagcagcagcagcagcagccccagccgcaccatcaccaccaccaccaggcc
cagcagccgcagccacagcagcagcagcagcagcagcagcagcagcagcagcagcagcag
caacagcagcatcttcatcatgatgcggcgcaggtaacgacgcatcccgaaaacttcccg
tccaatttcgacctacgaaaggagctattctcacagcgtaagcagcgcgagttcatcccc
gacaacaagaaggatgacagctactgggaccgtcgcagacgcaacaacgaggcagccaag
cggtcacgtgagaagcgccgtttcaacgacatggtcctggagcagcgggtgatggagctc
agcaaggagaaccatatcctcaaggcgcagctggaggcgatacgcgacaagtttggcatc
tgcggtgagtccgtcatcagcaccgagcacgtgttggccgctctaccctcggagccgacg
atcagcgtgaagcgtgcgaagatacctccgtcggcggcgcttctttacgcgcgcactccc
agcccggtgcacacgtcggtgatccatcagccggtgagcggcgcccgttcgcccagatcg
ccggcccaactctacgtgcccgagacgaccgcttacccggagaccgagagcttccagtat
ccgtactcgcacccggcgatgcatcacctggacaccacgagcgcgctgaacctgtcgtcg
cgcggccgccgggcgcagtcaccgttcgagctgtcgtccggtagcggcgacgaggccggt
ccccaaatggttgtgggctcccagaacaacccggccgccaacaacagtctgccccacaaa
ctcaggcacaagtcgcgcatcggcgacaaagacgccgcgagcgccctgcttgcgcttcag
ggcatcaagcaggaacctggaccgcgagcgtcgccaccctgggacgagggttccagcgac
gagcgcgactccggcatctcgttgggcgccgagtggaccggtccgaccgccaccacggtc
tcggaaagcgatcgggaggtgaagatgaagctggaccgcctcgcgtccgaagtcgcgtct
ctgcaatcgatattccgccttggtaagcccgtcgcagcagcggcggcggccgcggcggca
gacggcctagtgacgggtcactccgccgccacggtcagcggaccgtga
DBGET
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