Trachymyrmex cornetzi: 108770890
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Entry
108770890 CDS
T11212
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108770890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcz03019
]
108770890
Messenger RNA biogenesis [BR:
tcz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108770890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
MMR_HSR1
GTP_EFTU_D2
AAA_22
Dynamin_N
Ras
Motif
Other DBs
NCBI-GeneID:
108770890
NCBI-ProteinID:
XP_018378150
LinkDB
All DBs
Position
Unknown
AA seq
694 aa
AA seq
DB search
MSRHRDVRSMNYSDEYDGYDDVYGHSMEDDYCVSPSVEQFLFDRSKQQNIASFITEPDIV
EDNEDIDESSPSSNEEKFNLSELEKAKLISCLETIRNVIGDTVSDSKLKEKIILSNFDAN
IALDAILKESSPKKVTDSMENKKQLERHPGSKLSSKPTLQVTTPSTVKVVPTGTKPIVKG
FDLSGVENTDLLSPRCGSPSSNRNSPEVKRKEDIIQKEKRIVSSKMNSPRCQSPISGHVT
PELDTKVKSNASNEEKVDVEAIYNSKRGGSKEQLHLVVVGHVDAGKSTLLGRLLCDLGQV
PQRLIHKYQQESKKIGKQSFAYAWVLDETGEERERGITMDIGHSKFETDTKSITLLDAPG
HKDFIPNMITGATQADVALLVVDATRGEFETGFDSGGQTREHALLLRSLGVSQLAVVVNK
LDTVNWSKDRFNEIVDKMSVFLKQAGFKDTVTFVPCSGLSGENIVTKPKEQLSNWYTGPT
LVNVIDNFKCPERPINKPFRFSVNDIFKGTGSGFCVSGHVETGMVSLSDKVLVLPQNEIA
VVKGLQSDEVSTANAFAGDHVALTLAGIEQQNVGIGDIICNPQNPVPITTCFQAHVVIFA
IAKPITKGLPVVMHQQSLVQPAVIIKLIAQLHRSTGDVIKKKPRCLPKNSSAIIEVATQT
PVCMELYKDIKQLGRVMLRLEGTTIAAGLITKIL
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacatcgagacgttcgttctatgaattactctgatgaatacgatggttatgat
gacgtttatggacattcaatggaggacgattattgcgtatcacctagtgtggagcaattt
ttatttgatcgaagcaaacaacaaaatattgcttcatttatcacagaacctgatatagtc
gaagacaatgaagatattgatgagtcttcaccatcgtccaatgaagaaaaattcaatctt
tctgaattggaaaaggcaaaattaatatcttgtttggaaacaattagaaacgttataggt
gacacagtatctgattctaaattgaaagagaaaattattctgtcaaattttgatgcaaat
atagcacttgatgctattttaaaggagtcttcaccaaaaaaagtcactgattctatggag
aataagaaacaattggagcgacatccaggtagcaaattatcatcaaaacctacgttgcaa
gttacaacaccatctactgtaaaggtcgtaccgaccgggacaaaacctattgtgaaaggt
tttgatttaagcggtgtagaaaacacagatttgttgagtccacgttgtggaagtccgtct
tctaatcggaacagtcctgaagtcaaacgcaaggaagatatcatacaaaaggagaaaaga
atagtctcgtcaaaaatgaatagtccaaggtgccaatcacctatatcgggtcatgtaaca
ccggaattagatactaaagtaaaatctaatgcatctaatgaagaaaaagtggatgtcgaa
gcgatatacaacagtaagagaggcggcagcaaggaacagctccacttggtagtcgtggga
cacgttgatgctggaaaaagcacattacttggacgattactctgcgatttgggtcaagta
ccacagagacttatccataaatatcaacaagaaagcaaaaaaataggaaaacaatcgttt
gcctatgcttgggtactcgacgaaactggcgaagaaagagagcggggaataacaatggat
ataggccattcgaagttcgaaacggacacaaaatctatcactctgttagatgcacctggt
cacaaggattttattccaaatatgataaccggcgctacgcaagcagatgtagctttgtta
gtagtcgatgcaaccagaggcgagtttgaaactggattcgatagtggaggacagacacgc
gaacacgctctattactacgctctttaggagtatcgcaactagcagtagttgttaacaag
ctggatactgtaaattggtctaaagatagattcaatgagatagtggacaaaatgagcgtg
ttcttaaagcaagctggtttcaaagataccgtcactttcgtaccttgcagcggtttatct
ggagagaatattgtaacaaaaccaaaggagcaactctctaattggtataccggacctact
ctagttaacgttatcgataatttcaagtgcccagagcggcctataaataaaccatttcgt
ttttcggtgaacgatatatttaagggtactggatctggattctgtgtatctggtcacgtt
gaaacgggtatggtatccttgagtgataaggttttagtactacctcaaaacgagattgca
gttgttaaaggtcttcagtcagatgaagtttcaacggcaaatgcttttgctggggatcac
gttgcgctgacattagcgggaatcgagcagcaaaatgtgggtattggtgatattatctgt
aatccgcagaatccagtacccataacgacctgctttcaagcgcacgttgttatattcgcg
atagcaaaaccaatcacaaaagggcttccagtagtgatgcaccaacaatctttggtacaa
ccggcggttatcataaaattaatagcacaacttcatcgaagtactggtgacgtgatcaag
aagaagccgcgttgcttacctaagaattctagtgcgatcatcgaggtcgcaacgcagaca
ccagtttgcatggagttgtataaggatattaaacagctaggtagagttatgttacgatta
gaaggtaccactattgcagctggtttgattacaaagattttataa
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