Trachymyrmex cornetzi: 108771011
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Entry
108771011 CDS
T11212
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
tcz Trachymyrmex cornetzi
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcz03036
]
108771011
Enzymes [BR:
tcz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
108771011
Chromosome and associated proteins [BR:
tcz03036
]
Eukaryotic type
Gene silencing
piRNA pathway
108771011
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
TUDOR
Helicase_C
CDtoxinA
Motif
Other DBs
NCBI-GeneID:
108771011
NCBI-ProteinID:
XP_018378354
UniProt:
A0A195EI54
LinkDB
All DBs
Position
Unknown
AA seq
1027 aa
AA seq
DB search
MPVPVRKRISVKALTTTYNNPKNSKSFQKMKFHKHQVLDTIPATAKAIKIRNVQNPYCMR
AYEVEKHTETLCTIEERLLSFMKTNEFLKRKSNTEDAQIGDMVLIQHSFETGIKLPSSVC
RGLITCIKKEYGMYYIILLVDHGISMGLTRDKFHILPKNLIPDKYLTKTVGVYDIMPICM
RRSTILNGCNTIAVVAEKWTEKAIQFTKHLLSACKIVYFDHLITNESNGIEYGEFYFIID
NVVMSLSEALFLNYHAIYIEGELLKLVETHSQLKEKRWYILYVKFSRNKEKRYNVTRIKG
TNTRTKFFLREKILLQSSIDCDILSDITDLRYPKGIHQGWDENIKSSRPRKLQSYVWPAI
NNGLNVVAIGSTQCGKTSGCVMAVCGQIALRLHEIRSGTQPLALILCASSYEVISVQSLC
ESFLRTFTNIKCVAAFNGKSDRSVAAMIYNGCQILVTTPRYLVRFLNKNKGILSFDRLTC
LILDDVDVILENYYDSIGELFKKHKIIENREPQQDDRPILQIIFSATVWTPKIKKFVHLV
MNNPYICIASFIEAVVFKSVNLKLCHVNTGYKKQKLFDLLSKNEYLTMRTAIICTNAEEA
EDLNTFLILTKKTLLIHDKMKSSAIRALQESWIACVCGSYPVLICTDPVLSDLNFTNIQW
LIHFSVSSKFKNQFNYRFSLLLDNLTEDSSNCKISIIVDENDTIQLLSIVKIMERMNIAI
QPKISDYIRQKALELERNKKVYALCDNVKSFGSCRTRNICVFRHCVLSEIDAPITNIQID
DRVKLIVTYIHDTTHFSARILEHIPHSNESKKITFSNIEYMQNTGKIQSYYANIENRKMS
TSTNVGDICVLEETIDTFKRVQITRIRYDRDYSEDEIFVDVRCIDSGIVHEYINVRKLMH
IPKELLDLPTHIVEIFLANLVPWDEEYMWNHYTNEQVHKWFSENFDERSYIIGEVRLHLG
NTIWLDDLKIGTKLIGHPDLIGSSLKRELCHGNFSIVNNDHLSNLFELYRNSGMIKINGH
NLNAADK
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgccggttcctgttagaaaaaggatttctgttaaagccttaacaactacatataataat
ccaaagaactctaaatcttttcaaaagatgaagtttcataagcatcaagttttagatacc
attcctgctacagctaaagcaataaaaataagaaatgtacaaaatccatattgcatgaga
gcttatgaagttgaaaaacatacagaaacactctgtacgattgaggaaaggttattaagt
tttatgaaaacaaatgaatttttgaagagaaaatctaatacagaagatgctcaaattggt
gacatggttcttatacaacatagttttgaaactgggataaaattaccatcaagtgtttgt
cgaggtttaataacttgtattaaaaaagagtatgggatgtattatataattcttttagtg
gatcatggaattagtatgggattaactagggataaatttcatatacttccaaaaaatctt
atccctgataaatatttaacgaaaactgttggtgtatatgatattatgccaatctgcatg
agaagaagcactattttaaatggttgcaacactatagcagttgttgcagaaaagtggacc
gagaaagcaattcaatttacaaaacatcttctcagtgcatgtaaaattgtatactttgat
catttaatcacgaacgaaagtaatggaatagaatacggagaattctattttatcattgat
aatgttgtcatgtcattgagtgaagctttatttcttaattatcatgcaatttacatagaa
ggagaattattaaaactagttgaaacacactcacaacttaaagaaaaacgatggtacatt
ttatatgtaaagttttcaagaaataaagaaaaaaggtacaatgtaacacgcatcaaagga
actaatactcgcacaaaattctttctcagagagaagattttattacagagctcaatagac
tgtgacatcttaagtgatattacagacctcagatatcccaaaggaatacatcagggttgg
gatgagaacatcaaatcttccagaccaagaaaacttcagtcttacgtatggccagctata
aacaatggattaaacgtcgttgctattggatcaacacagtgtggtaaaacgagcggatgc
gtaatggctgtttgcggtcaaatagctttgcgtttacatgaaatacgtagtggaactcag
ccgttagcattgattttatgtgcctcgtcttatgaagtaatttccgttcaatctttgtgt
gagtcgtttctgcgaacttttactaatataaaatgtgttgctgcatttaatggcaagtcg
gatagatcagtagcggcaatgatatataatggttgtcaaattttagtgactacaccgcga
tatctagttagattcttaaataaaaataaaggtatattgtcatttgatcgacttacttgt
ttaatacttgacgatgttgatgtaattttggagaattattacgattcgataggagaactc
ttcaaaaagcacaagataatcgagaatcgtgaaccacaacaggatgatagaccaatattg
cagataattttttcggcaacagtctggacgcccaagattaagaaatttgtacatctagtg
atgaataatccatatatatgcatcgcgtcatttatagaagctgtggtttttaaatctgta
aatctaaaactgtgccatgtaaacactggatacaagaaacaaaaactattcgatttattg
tcaaaaaatgagtaccttacgatgagaacagcgataatatgtacgaacgctgaagaagct
gaagacttaaatacctttttaattttgacaaagaaaactctgctaattcatgacaaaatg
aaatcgtctgctatacgagctttacaagaaagttggatagcatgtgtttgtggctcctat
ccagtactgatatgtactgatccagtcttatctgatctgaattttactaatattcaatgg
ctaatacatttttctgtatcatcaaaatttaaaaatcaattcaattataggttttcttta
cttttagataatttaacggaggattcatctaactgtaaaattagtattattgttgacgag
aacgacactatacagttattaagtatagtaaaaataatggaacgaatgaacattgcaata
cagccgaaaatatctgactacattcggcaaaaggctcttgagttagagaggaataagaaa
gtatatgctctatgtgataatgtaaaatcatttggctcctgccgaacacgaaatatctgt
gtatttagacattgtgtcctttctgaaattgatgcgccaataacaaatatacaaatagat
gatagagtgaagttgatagtgacatatattcacgatacaacacatttttctgcaagaatt
cttgaacatattccacattctaatgaatcgaaaaaaataacattttccaacatagagtat
atgcaaaatacgggtaaaatacaaagttattatgcaaatatcgaaaacaggaaaatgtct
acttcgacgaatgtaggtgatatctgcgttttggaggaaactattgatacatttaaacga
gtacaaattacacgcatcagatatgacagagattattctgaagatgaaatattcgtagac
gtgagatgtatcgacagtggtattgtacatgaatacattaatgtacgtaagctaatgcac
atcccaaaggaattattagatctcccaacacatattgttgaaatatttttagctaattta
gttccttgggatgaggaatatatgtggaatcattatactaatgaacaggtgcacaagtgg
ttctcagaaaatttcgatgaaaggtcttatattatcggagaagttcgccttcatcttgga
aatacaatatggttagatgatttaaaaataggaacaaagttaattggtcatcccgatcta
ataggatcctctttaaaaagggaattatgccatgggaatttttcaattgtgaacaacgat
cacttatcgaatctatttgaactttacagaaacagcggaatgataaaaatcaatggtcat
aacctaaatgctgcagataaataa
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