Teleopsis dalmanni (Malaysian stalk-eyed fly): 119662686
Help
Entry
119662686 CDS
T09311
Name
(RefSeq) collagen alpha-1(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda04382
Cornified envelope formation
tda04512
ECM-receptor interaction
tda04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119662686
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119662686
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
119662686
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tda04147
]
119662686
00536 Glycosaminoglycan binding proteins [BR:
tda00536
]
119662686
Exosome [BR:
tda04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
119662686
Glycosaminoglycan binding proteins [BR:
tda00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119662686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
119662686
NCBI-ProteinID:
XP_037928303
LinkDB
All DBs
Position
X:32423889..32486201
Genome browser
AA seq
1840 aa
AA seq
DB search
MFVMRAPGGHSGLSGVSSHRRVTLTYLWAIIFAVYLITITQNHGTFVEARETNKSCNQTI
CDCKGLKGHQGSMGPKGFPGQEGSPGDMGPTGPPGRPGEIGDAGEYGEQGEKGQRGDAGE
TGLPGMHGPTGRPGDDGSQGPRGIDGCDGKEGLQGIPGLPGRYGSRGPLGKPGSAGVVGD
AGEGGINSKGTKGSRGEHGEHGLSGQQGLSGVKGYKGATGYPGIEGAKGDEGLKGYKGEM
AEPVNLQLMLEGAHGEKGEPGDAEENELKYADVIKGYKGERGFPGINGVSGVQGETGEFG
RQGLPGARGDIGERGERGKPGKPGEPGFSGEKGVKGAPGYNGNSGEDGLPGIRGENGFDG
TPGVQGPVGPPGIYDPYLDKAYPGPQGPQGDIGEQGDPGVTGIPGRPGRRGPVGPAGPPG
DTGLDGLQGRRGVSVKGDEGDYGLIGFPGPIGATGGPGPKGRVGQRGNPGLNIRGKKGFA
GQNGIPGAFGYRGDRGEVGLPGEKGLPGVGVNVVGPPGFEGPPGPRGQPGDDGYRGFDGN
PGDKGIRGDDCGICPAGPQGTKGLQGDAGRPGDHGRRGQQGLTGQRGPKGSSGLPGRKGY
KGEAGTNGIPGDRGQIGSPGRHGIVIPIKNLAQKIPGDQGDIGERGEQGQEGDRGQDGRH
GWRGEKGETGLRGEYGDSGRPGINGNKGARGRNGLPGRNAQVPKEFLVGESGYNGSGGAR
GEVGDKGTKGDKGEPNPGQIYDNKGEPGDKGFEGQIGAKGFQGDMGVPGISGIRGDIGLP
GPTIEGPMGFKGWSGVIGDFGNHGAPGSPGLNGLAGSEGVKGIKGVRGDPGRNILPGDIG
VDGDMGMRGITGDIGFPGYPGRAGVLGTKGVKGLKGDDGQMGLQGLSGNKGARGDVIVGY
PGLEGAPGRDGRTAPHGIKGDVGEIGALGANGAKGVKGKVGLPGRRGSIGDQGLPGQPGQ
IGPVGWGGIPGNQGDRGDIGQNGRYGDMGSRGQMGNIGSKGQTGDAGPVGHAGTYGRHGR
KGQMGDRGLIGQRGNKGISARSGIKGQMGTPGPTGIQGYAGIEGQKGQKGSEGDTPIAYD
GLVGFKGPTGEPGRIGLHGLKGVKGERGDYGYTGAPGNIGDNGFPGLPGRNGRNGAPGRK
GSDGPIGLEGLQGAQGEIGDTGFAGNVGIKGDYGDMGLVGADGAKGERGEIGEQGRPGIT
LDGYAQRGDKGEQGLMGQMGPMGDQGSLGDSGYDGRKGEIGEIGLDGVTGIDGYIGIKGG
VGDKGSIGLPGPIAAFIENGEVGDSGYDGLGGRPGLPGQKGAPGEQGDNGNAGLIGLPGP
SLQGPVGGVGDIGYPGPAGRSGLNGRAGPKGVRGDTGIQGQRGEPGFAILGRRGDAGDYG
FEGARGYDGIKGQQGERGIPGRNGLMGPRGQLGATGDQGWSGIDGLPGLDGLKGEPGITF
PFDYARKGDRGEPGLEGFKGQIGDMGVQGIAGRIGLRGMKGFQGEQGQMGIAGRDGPQGD
IGMIGQPGLAGQTGPAGPKGPVGDPAPPPPRSKSRGFIFVRHSQTVRIPDCPANTGKLWE
GYSLAGNIASSRTVGQDLGSSGSCLMQFTTMPYMMCDVNNVCNYAQNNDDSMWLATDEPM
PMQMTPIQSKDLRNYISRCVVCETTTRVISLHSQSMSIPDCPNGWEEMWTGYSYLMTTTD
NTGGFGQNLVSPGSCLTEFRSNPVIECHGHGRCSYYDPVASFWLAVIHENEMWSAPRPQT
LKADHTSKISRCTVCRRRNDSFVTRLPDAGSVAKELRRAPERVIPVHRPEAVPSSNQYPN
YRQYNFQNNYRRPNPNGAYNYGEQNRVNRIRRPREDTYAP
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtaatgcgtgcacccggaggccacagtggtctctcgggagtaagttcccataga
cgagtcactctaacttacttgtgggctataatatttgccgtatatttaattacaataaca
caaaatcatggaacatttgtagaagcaagggaaactaataaaagctgcaatcaaacgatt
tgtgactgtaaaggtcttaagggacatcagggttctatgggtcctaaaggttttcctggt
caggaaggctctccaggagatatgggcccaacaggtccaccaggtcgaccaggtgaaatc
ggcgatgctggcgaatatggagaacaaggcgaaaaaggacaacgcggtgacgctggtgag
actggtttacctggaatgcatggaccaactggtcgacctggtgatgacggttctcaaggt
ccacgtggtattgatggttgtgacggtaaggaaggcttgcaaggaataccaggtttacct
ggccgatatggctctcgtggtcctcttggaaaacccggttctgctggtgtagttggtgat
gctggcgaaggtggtataaactcaaagggtacgaaaggaagtcgtggtgagcatggtgag
catggtttatctggtcagcaaggtctgtctggtgtaaagggttataagggtgccactggg
tatcctggtatagaaggcgcgaaaggtgatgaaggattaaagggctataaaggtgaaatg
gcggagccagtcaacctacaattaatgcttgaaggtgctcatggtgaaaaaggtgaacct
ggtgatgctgaagagaatgaacttaaatacgctgatgtaataaaaggctacaaaggtgaa
agaggttttcctggaataaatggggtatcaggagtacagggcgaaactggtgaatttggt
cgacaaggcttaccaggtgctcgtggtgatattggtgaacgtggtgagcgtggaaagcca
ggtaagcctggtgagccaggtttttccggcgaaaaaggagttaaaggtgcgcctggatat
aatggaaatagtggagaagatggtttgcctggaatacgtggtgaaaatggttttgatgga
actccaggagttcaaggtccagtaggcccacctggtatatatgacccttatctggataag
gcttatcccggtccacagggtcctcaaggtgatattggagaacaaggtgatccgggcgta
actggtatcccaggaagacctgggcgtcgtggacctgtgggtccggccggtcctccgggt
gatacgggtctagatggtttgcaaggtcgtcgtggagtcagtgttaaaggtgatgaaggt
gactacggtttaattggatttcctggaccaataggtgcaacaggtggacctggccctaaa
ggtcgtgttggtcaaagaggtaatcctggtttaaatattagaggtaaaaaaggttttgct
ggacaaaatggaatacctggtgcatttggataccgtggtgatcgcggtgaagttggttta
ccaggtgaaaaaggtttacctggagttggtgtaaatgttgtcggacctcctggttttgaa
gggccaccaggtcctcgtggccaacctggagatgatggttaccgaggatttgatggcaat
cctggtgataaaggtattcgtggtgatgactgtggaatatgtccggctggtcctcaaggc
actaaagggttacaaggagatgctggtcgtcctggtgatcatggaagaagaggacaacaa
ggtttaacaggtcaacgtggcccaaaaggttcatctggcttacctggtcgaaaaggttac
aaaggagaggctggtacaaatggaattcctggtgaccgtgggcaaataggatctcctggt
cgacatggtattgtaatacctattaaaaatcttgctcaaaaaattccaggcgaccaaggt
gatattggtgaacgtggtgaacaaggacaggaaggcgatagaggacaggatggtagacac
ggatggaggggtgaaaaaggtgaaacaggcctacgtggcgaatatggtgattctggaagg
ccaggtattaatggtaataaaggtgcaagaggcagaaacggattacctggaagaaatgca
caagttcctaaagaattcttagttggtgaatctggttacaatggaagcggaggtgcacgt
ggtgaagttggtgataaaggcactaagggcgataaaggcgaaccaaatcctggacaaata
tatgacaataagggtgaacctggtgacaaaggctttgagggacaaataggtgctaaaggt
tttcaaggagatatgggagtgccaggcatttcaggcattcgtggtgatataggtttacct
ggaccaacaattgagggacctatgggatttaaaggctggtcgggtgttattggtgacttt
ggcaatcacggtgctccaggtagtcctgggttgaatggtttggctggatcagaaggcgta
aaaggaataaagggagtacgtggagatccaggtcgcaatatattgcctggtgatattggc
gttgatggtgatatgggtatgagaggtataactggcgacatcgggtttcctggttatccg
ggacgtgctggtgttctaggaacaaaaggtgttaaaggtcttaagggtgatgatggacaa
atgggattacaagggttatctggtaacaaaggcgcacgtggagacgttatagttggttac
cctggcttagagggagctccaggaagagacggtcgtacagcgccacatggtataaaaggt
gatgtaggtgaaattggcgcgctaggtgcaaatggtgctaaaggtgttaaaggaaaagtc
ggattaccaggacgaagaggttcaattggagatcagggtttacctggacaacctggtcag
attggccctgtaggctggggtggtatacctggtaaccaaggcgacagaggtgacattggt
caaaatggaagatatggtgatatgggttcaagaggccaaatgggtaacataggttcaaaa
ggtcaaactggagatgcgggaccagttggtcatgctggtacgtatggtaggcacggcaga
aaaggtcaaatgggagatagaggtttaattggtcaaagaggtaacaaaggaatatctgcc
cgaagtggtattaaaggtcaaatgggaacaccagggccaactggtattcaaggttacgca
ggaattgaaggtcaaaaaggacaaaaaggttcagagggagatacacctattgcttatgac
gggcttgttggctttaagggaccaaccggtgaaccaggccgcataggtctacatggttta
aaaggcgttaagggtgaaagaggagactatggatatacaggtgctccaggaaacattggt
gataacggtttccctggtttaccaggcagaaatggtagaaatggtgctcctggtagaaaa
ggcagcgatgggccaattggtttagaaggtcttcaaggcgcacaaggtgaaataggtgat
acaggattcgctggcaacgtaggaatcaaaggtgattacggtgatatgggtttagttggt
gcagatggcgcaaaaggagaacgtggtgaaataggtgaacaaggacgaccaggtataaca
ttagatgggtatgctcagcgaggcgacaaaggtgaacaaggattaatgggacagatggga
ccaatgggtgaccaaggttcacttggtgattctggttatgatggtagaaaaggagaaatt
ggtgaaattggtttagacggagttactggcattgatggatatattggcattaaaggcgga
gttggtgacaaaggttcgattggtttaccaggtccaatagctgctttcatcgaaaatggt
gaggtaggtgattcaggttatgatgggcttggtggtcgaccaggattacctgggcaaaaa
ggtgcccctggcgagcaaggtgataatggaaatgccggcttaattggtttacctggccca
agcttacagggtccagttggtggagttggtgatattggatatcctggtccagctggtaga
agtggattaaatggaagagcaggtcccaaaggtgtacgtggtgatacaggtattcagggc
caacgtggtgaacctggttttgcaatattaggtagacgtggtgatgctggtgattacggt
ttcgaaggtgctcgtggttatgatggaattaaaggtcaacagggagaaagagggataccg
ggtagaaatggtctaatgggtccacgtggccagcttggtgccactggagatcaaggttgg
agtggaatagatggtcttcctggcttagatgggcttaaaggtgaacctggtataacattc
cccttcgactacgctcgtaaaggtgaccgaggtgaacctggcttagaaggctttaaaggc
caaataggtgacatgggtgttcaaggtatagctggcagaataggcctacgtggaatgaaa
ggttttcaaggtgagcaaggccagatgggtatagctgggcgagatggaccacagggagac
ataggtatgattggtcaacctggtttagctggacaaacaggaccagcaggacctaagggc
cccgtaggcgatccagcgccaccaccaccccgttcaaaaagtcgcggttttatatttgtg
cgacactcacaaacggtacgaattcctgattgtccagctaatacaggtaaattatgggaa
ggatactcattggctggaaatattgctagtagtcgtacagttggacaagacttgggatca
tcgggttcatgtttaatgcagtttaccactatgccctacatgatgtgcgatgtaaacaat
gtatgtaattacgcacagaacaatgatgacagtatgtggcttgcaacagatgaaccaatg
cccatgcaaatgacgccaattcaatcaaaagatttgcgtaattatatatctcgttgtgtt
gtgtgcgaaacaacgacacgcgttatatctcttcacagtcaaagtatgtctataccagat
tgtccaaatggatgggaagagatgtggactggttatagttatcttatgactacaaccgac
aacactggcggttttggacaaaatctggtgtcacctggatcatgtcttacagaattccgt
agcaaccctgttattgaatgtcatggccatggccgctgcagttactatgatcctgtagca
tctttctggttagctgttatacatgaaaatgaaatgtggagcgcaccaagaccacaaaca
ctaaaagcagaccacaccagtaagattagcaggtgtactgtctgtcgccgtcgcaatgat
tcatttgttacacgccttccggatgctggcagcgttgcaaaagaattaagacgagctcct
gaaagagttattcctgtgcaccgtccagaagcagtgccaagctcaaatcagtaccctaat
taccggcagtacaatttccaaaacaattacagacgtccaaatccaaacggtgcctacaac
tatggagaacaaaaccgtgtgaaccgaattcgacgtccacgtgaggacacttatgcacca
taa
DBGET
integrated database retrieval system
