Teleopsis dalmanni (Malaysian stalk-eyed fly): 119666812
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Entry
119666812 CDS
T09311
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119666812
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tda00536
]
119666812
Glycosaminoglycan binding proteins [BR:
tda00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119666812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
119666812
NCBI-ProteinID:
XP_037932020
LinkDB
All DBs
Position
1:179337078..179349821
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AA seq
1828 aa
AA seq
DB search
MSLQRKFVSTDSKKHELKTSAFLKSGEELNFQFPFGGRWKKFESKEIDGIIDLIKEFGLP
DLPPGITSVPGMCGVSQHPNLVQTTPAYHISKDAILTVQTSQAFPQGFPSDFSIILALRS
NRINQKKAPIFTIYSEESEETLSLSIGKEITMSYEQINAGFNQQNDINFGIGVDDTVWHR
IGISVKGNSATLILDCTKQVTRRLERSPGSTISTNGLILTGVQMNSDEGFFIGDIELMAI
TNSPDDGYDVCTKHMLSCAKRVLNISRVETGFDDMRRNSLDSSSMQSSAYTSAYSTNDKI
KRNEQLVASAEYVSADNERFGIGGPASNGYGSIPRTEDSDVNTNIYPAIGFEENYETDDY
LIDGDYDTIFNVTEVTEANLVETSKDKVENTINSETTTSNEPDGEKDLQEVVFTEINGSR
RSNVTQKRNETLFESESVICYPGPRGYTGIPGPQGERGQQGEPGRDGLAGVSGIQGPPGH
IFVVPTAQGGNEKGPDSQAEALLQLIQQHMLALRGSDGPMGLTGLPGPAGLIGPKGTKGE
PGEIGEPGSRGLRGPAGPPGREGRRGRSGRDGERGSMGPQGPKGEIGPIGPMGLPGEKGH
RGIPGQSGEKGQQGVEGHPGEEGPPGLPGLPGELGPRGFLGPRGFPGPVGNPGLQGNEGP
QGIKGSTGSTGLPGQPGLQGTTGSTGAPGPQGISGPPGIPGPSGKPGLPGLPGADGSPGA
AGNPGPTGFKGDQGMQGMQGAVGLPGPRGAKGDDGLRGPTGDKGDNGERGIEGEKGDTGP
SGERGTPGQPGVPGPEGPEGPKGFEGPRGETGIQGLTGEKGKQGPQGFQGYPGPSGDKGD
KGATGSTGPAGLKGDRGHPGLQGERGEMGPRGFRGSRGRRGSDGSPGHKGDTGQPGAIGP
QGETGPQGAEGPRGFIGMPGPPGADGRTGQVGLPGERGQPGEPGKPGPPGDTGVIGPRGS
PGELGPIGEPGIPGLPGPTGEMGLPGEAGKEGLPGPMGSAGIPGPQGATGLPGFPGERGH
QGQPGLPGLKGEQGIIGSPGFPGEKGQSGEPGHSGPQGPPGNVGSPGNPGSPGAKGEIGE
KGPVGPAGRDGLMGLRGLPGPPGPTGTPGEDGDKGEVGLPGEKGLKGNQGETGPIGSAGA
QGSRGEPGPPGSPGEKGPPGEAGHRGIKGEDGKIGPMGPQGKPGNQGLPGPAGIKGERGD
EGVMGPVGPPGLPGEQGRRGIKGVHGQQGKPGPQGPQGIIGVDGSQGPPGPVGAMGKQGD
RGIIGPKGEQGRSGPIGPPGIQGMQGPIGPKGAIGARGFPGAPGIPGAIGPKGDIGPDGE
DGKPGEIGPPGDVGPEGRIGETGPSGKQGPEGPAGPQGTIGPIGEKGDKGGIGPAGPLGM
IGPQGEPGIRGHQGTKGSPGIAGDIGTPGHMGLPGKEGKIGEIGPAGPKGDRGRRGQKGH
RGELGPVGLKGDQGEKGDRGFRGVQGQEGRQGDIGSGGPIGPKGNDGPQGLIGVSGSPGP
KGTEGVAGLKGEAGPMGPPGPPGEPAEAPLIPPDLLFQMQQFSTTKAETRRRRYVEDKND
SNQLDDDDDFNDIMGLTSPEPTAAEPHKKNKRRKKKKPIDLNEKYMDMYSTIYSIRQEMD
RMRKPAGTQDNPVRTCRDLHYAHPHFDDGWYWIDPNAGMPDDSIYVYCNMTAKGETCIYP
DAHTSEMPVLPKRKFSNEWFSEHSGGFKITYDGVGTVQLNFLRLLSEEAYQNFTYSCVNS
VAWFSSSHNDYRQAIKFLGDNEMEISKGGLVAPEVIFDQCQSPQTDGKTVLSVRTKRVNF
LPLIDFLPLDYGNADQAFGFKFGPICFK
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atgagtttacaaagaaagtttgtgtctacggattcaaagaaacatgaattgaagacatca
gctttcttgaagtcaggcgaagaattgaattttcagttcccgttcggcggtcgttggaaa
aagtttgaatcgaaagaaatcgatggcattatcgatttaattaaagaattcggtttacca
gatcttccgcctggtataacatctgtgccgggtatgtgtggtgtttcacaacatccaaac
ctagtacaaaccacacctgcttatcatatatcgaaagacgctatactcaccgtacaaaca
tcgcaagcgtttccacaaggttttccatctgatttttccataatattagcacttcgcagt
aatcgtataaatcaaaagaaagcacctatatttacaatatactcagaagaaagtgaggaa
acactttcactgagcatcggtaaagaaataactatgagttatgaacaaatcaatgccggt
tttaaccaacaaaatgatataaacttcggtattggagttgatgacactgtttggcatcgt
attggcataagtgtcaaagggaactctgcaacattaattttggactgtaccaagcaagtt
acacgtcgtttagaacgatctcctggtagtactatatccacaaatggtctcattctaact
ggtgttcaaatgaatagcgatgaaggtttctttatcggtgatatagaattaatggccatc
acaaattctccagatgatgggtatgatgtttgcacaaagcacatgctatcttgcgcgaaa
agagttttaaatatttcaagagtggaaacaggttttgatgatatgcgtagaaatagtctt
gattcatcttccatgcaatcttctgcctacacttctgcatattctactaatgataaaatc
aaaagaaatgagcaattagttgcaagtgcagagtatgtaagcgctgataatgaacgtttt
ggtattggtggaccagcatcaaacggatacggttcaataccgcgaacagaagattctgat
gtcaacacaaatatttatcctgcaattggttttgaagaaaactatgaaactgatgattac
ctcattgacggtgattatgataccatatttaatgtgactgaagtaacagaagctaatttg
gtcgagacatctaaagataaagtcgaaaatactattaacagcgaaacgactaccagtaat
gaaccagatggtgaaaaagacttgcaagaagttgtttttacagaaattaacggttccaga
agatctaatgtcactcaaaaacgcaatgaaacattatttgaaagcgaatcagttatatgc
tatccaggccccagaggatacacaggtataccaggaccgcaaggtgagcgaggtcagcaa
ggtgaacccggacgagatggcttagctggcgtttctggtattcaaggtcctcctggtcat
atttttgtagtgccgactgcgcaaggaggaaatgaaaagggtcccgattctcaagcggaa
gcattgctccaactcatccaacaacacatgttagctttacgtggctcagatggcccaatg
ggtttgacaggtctgcctggccccgcaggtttgattggtcccaagggtactaaaggagaa
cctggtgaaattggagaaccgggttcacgagggctacgaggtcctgcagggccacccggt
cgcgaaggtcgtcgcggacgttcaggtcgagatggagaacgtggcagtatgggaccacaa
ggaccaaagggtgaaattggcccaataggtccaatgggtttaccaggagaaaaagggcac
aggggtattccagggcaaagtggtgaaaaaggtcaacaaggcgtagaaggacatcccgga
gaagaaggtccgcctggcctacccggattaccaggcgaacttggtccacgaggtttcctt
ggtccgcgcggctttccaggtccagttggtaatccaggcttgcaaggtaatgaaggtccg
caaggcatcaagggcagtacggggtcaacaggcctacctggacaaccgggactacaaggt
acaacaggcagtactggtgctccaggaccccaagggatttctggtccccctggcattcca
ggtccaagtggtaaacctggcttaccagggcttcccggtgctgatggatctcctggcgca
gctggtaatcctggaccaactggtttcaaaggtgatcagggtatgcaaggaatgcaaggt
gcagttggactaccaggtccgcgtggtgctaaaggtgacgatggtctccgtggtcctact
ggtgataaaggtgataacggcgaacgtggaattgaaggagaaaaaggagatactggtcct
tctggtgaacgtggcacgccaggacaaccaggtgttccaggtcccgaaggtccagaagga
ccaaaaggtttcgagggacctagaggtgagactggaattcagggtctaactggcgagaaa
ggaaagcaaggtccacaaggatttcaagggtacccgggtccatcaggagataaaggtgat
aaaggtgcaaccggatcaactggtccagctggcttaaagggagacagaggacatcctgga
ctgcaaggcgaaagaggagaaatgggtccaagaggcttccgcggttctagaggtcgaaga
ggtagtgatgggagcccgggtcacaaaggggatactggacaacctggtgctattggtcca
caaggtgaaactggccctcaaggtgcggaaggtccaagaggtttcattggtatgcccggt
cctcctggtgcagatggtagaactggacaagttggcctcccgggagaaagaggacaaccg
ggagaaccaggcaaaccaggaccacctggagatacaggcgtaattggtccacgtggctcg
cctggtgaattgggacctattggtgaacccggtatacctggactacctggaccaactggt
gaaatggggctaccaggagaagcaggtaaggagggtctacctggtccaatgggttcagct
ggtattccaggaccacaaggtgcaacagggcttccagggtttcctggagaacgtggtcat
caaggccaaccaggtttgccaggacttaaaggagaacaaggaattataggtagtccaggc
tttcctggtgagaagggtcaaagtggcgaacctggtcacagtggaccacaaggtccacca
ggaaatgtaggttcacctggtaaccctggatcacctggtgctaaaggcgaaattggagaa
aaaggtcctgttggacctgctggtagggatggtttgatgggattacgtggattacctgga
ccaccaggaccaacgggtacaccgggtgaagatggtgacaaaggagaagtaggcttgcct
ggggaaaaaggcctgaaagggaaccaaggagaaacgggacctattgggtctgcaggtgca
caaggatctcgcggtgaacctggacctccaggatctcctggtgagaaaggtccaccaggt
gaggctggtcatagaggaataaagggtgaagatggtaaaattggaccaatgggtccgcaa
ggaaagcctggaaaccaaggacttccgggtcctgctggtattaaaggtgagcgtggagat
gaaggagtaatgggtccagttggaccacctggtctacctggtgaacaaggacgtagagga
ataaaaggtgtacatggtcagcaagggaaacctggaccccaaggaccccaaggtataatt
ggtgttgatggttcgcagggccctccaggaccggtaggtgcaatgggtaaacaaggagac
cgcggaataataggaccgaaaggtgagcaaggacgaagtggacctattggccctcctgga
atacaaggtatgcaaggacctataggaccaaaaggagccataggagctagagggtttcca
ggtgcaccgggaattccaggagctataggaccaaaaggagatataggaccagatggagaa
gacggtaagcctggagaaattgggccacctggtgatgtggggcctgagggacgaattggt
gaaacagggccatctggaaaacagggacctgaaggaccggccggtccacagggaacgata
gggccaattggagaaaaaggtgataaaggtggcataggaccggctgggcctttaggaatg
ataggtccacaaggagaacctggtatacgaggacatcaaggtacaaaagggtctcctggc
attgctggtgatattggaactccaggtcatatgggtctaccaggtaaagaaggtaaaata
ggtgaaataggacctgctgggccaaaaggtgatcgtggtcgcagaggtcaaaagggacat
cgaggtgaacttgggccggttggtctaaaaggtgatcaaggtgaaaaaggtgatcgaggt
tttcgcggtgtacaaggacaagaaggacgacagggagacataggatccggtggtcctata
gggcccaaaggaaatgatgggccacagggtctaattggtgtcagtggttccccgggtcct
aaaggtactgaaggagttgcaggtttgaaaggagaggcaggaccaatgggtcccccaggt
ccaccaggcgaaccagccgaagcgccgcttataccaccagacttgctctttcaaatgcaa
caattttctacaacgaaagcagaaactagacgaagaagatatgtggaagataagaatgat
tctaatcaactggatgatgatgatgattttaatgacataatgggtcttaccagtccggaa
ccaacggccgctgagccacataaaaaaaacaaacgccgaaaaaagaagaagccaattgat
ttaaatgaaaaatacatggatatgtatagtactatatatagtattcggcaagaaatggat
cgcatgcgtaaaccggccggcactcaagataatccggttcgtacttgtagagatctacac
tatgctcatccacattttgatgatgggtggtattggatagatccaaatgctggtatgcca
gatgactctatatacgtttactgcaacatgaccgcgaaaggagaaacctgtatttatcct
gatgctcataccagtgaaatgccagtgctgcctaaacgaaaatttagtaatgaatggttc
tcagagcacagtggtggatttaaaataacatacgatggtgtcggaacagttcagttaaat
ttcttacgtttattatctgaagaggcttatcagaattttacgtattcctgtgtaaattcg
gtagcttggtttagcagttctcataacgattatagacaagcaattaagtttttgggtgat
aatgagatggaaatttcaaaggggggattagttgcaccggaggttatttttgatcaatgc
cagagtcctcaaactgatggaaaaactgtgttgagcgtacgaacgaagagagtaaacttt
ttaccattgattgactttttgcctttggattatggaaatgcagatcaagcttttggattt
aagtttggaccaatatgttttaagtaa
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integrated database retrieval system
