Teleopsis dalmanni (Malaysian stalk-eyed fly): 119668200
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Entry
119668200 CDS
T09311
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119668200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tda03400
]
119668200
DNA repair and recombination proteins [BR:
tda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
119668200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
119668200
NCBI-ProteinID:
XP_037933568
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Position
1:80880695..80885165
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AA seq
1163 aa
AA seq
DB search
MSKKLNKSGVSNTLFNYFAKSPASVEKKKIPSATNGISEIKNDLEKENMENGKNIQAATE
KPTKRCLETDLQDLENIDEDDDITLQKGNKRRRVVLSDSDEEDSGANSNMNSAGNDDSNS
DSDESDNEISKTKDEPKHKKVKIDQSSELSVLQKLQSLQEDAQNNKSSVKNNIKAEQNDC
NSLAYDEPVVWPHHKLEFLKPDKIKDKNGKTPDQPDYDATTLFVPTKFLDSLTPGVRQWW
ILKSNNFDCVLFFKVGKFYELYHMDADVGVKELGFTYMRGEFAHSGFPEISYDKMVSVLV
DRGYKVARVEQTETPDMMTERCKQMSRPTKFDKVVRREICQITNRGTQVFGSQCQITPKY
QPNYLLALVEKDNGVISTYGVCYIDTSIGDFYIGEFEDDKNCSRLLTLLSHYMPVLVLFE
KSTLSERTRHILRTSLAAILKEPISSAEAMKCDAENTLKHLAETYYATSSENNWPLILRT
MQDENDHLGLTPKKGYILALKALGECIRYMKKCYLEEKILPMARYHFYEPPDTLSSDVTV
KSTISKTSLPRSTMVLDATTLSNLRITGEEHSLYATLDNCCTKFGKRLLHYWLCAPSCDL
NTILERQNAITDLMDHPELLQELRALLTPMPDFERHLAQVHLFGNKTIMQKHPDGRAILF
EEKLYNKKKIQNFISILKGFEILTQIPDMLKDCSSVLIKRITQTSDNGGIFPKMHELLQF
FNNAFNHEEAAKTGVVAPEKGVDSDYDECEAKIKDINQSLQDYLKEQEKFFGCRLAYFGT
DKKRFQLEVPESNARKAGKVYQLEGQKKGNKPCRRFSTNETRAFLKQMQNAEMERDNILK
DLARRIFEKFSNNYSVWKLCTECISNLDVLSSLAEYARQQNVLCIPEFIQPEDNNCQPFV
DIEEGYHPCVSSDTYIPNGIVLGSPNVAPLSILTGPNMGGKSTLMRQVGLLAVMAQIGSH
VPAQKYRLSLVDRIFTRLGAQDDMLSGQSTFLVELNETSLILKHATVHSLVLLDELGRGT
ATYDGTAIAVSVVNYLADIKCRTLFSTHYHNLIDFFQKDQRITLGHMACMVENEDDDDPT
QETVTFLYKYSPGACPTSYGFNAAKLAGMPTPIIKRAYQLSKKVEAIALKRKITAKILTS
AGGGLSAVTDIQNLLRQFKKCNV
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaaacttaataaaagcggggtctcaaacacattgtttaattattttgctaaa
tctccagcatctgtagaaaaaaagaaaattccaagtgcgacaaacggaatttcagagatc
aaaaatgatttggaaaaggagaatatggaaaatggaaaaaacattcaggcagcaacagaa
aagcctactaaaagatgcttggaaaccgatttacaagatctagaaaacattgatgaagat
gacgatattactttacaaaaaggtaataaacgacgtcgtgttgtcttgtctgattctgat
gaggaggattctggtgccaattcgaacatgaatagtgctggtaacgatgactctaatagc
gattctgatgaaagtgacaatgaaataagcaaaactaaggatgagccaaaacacaaaaaa
gtaaaaattgatcagtctagtgaactatctgtcttgcaaaaattgcaaagtttacaagaa
gatgcgcaaaacaataaaagttctgttaaaaataatattaaagctgaacaaaatgattgc
aatagtcttgcctatgatgaacccgttgtttggccacatcacaaattagaatttcttaaa
cctgataaaataaaagataaaaatggaaaaactccagatcaacctgactatgatgccact
actttatttgtaccaacaaagtttttagactctctcacgccaggagttcgccaatggtgg
attctcaagtcgaataattttgattgcgtactattctttaaagttggaaaattttatgaa
ctgtatcatatggatgctgatgtgggtgtaaaagagttgggattcacatatatgcgaggc
gaatttgctcattcgggttttcctgaaatatcctatgataaaatggtttcagtattagtt
gacagaggttataaggtagcacgagtagaacagacagaaacgccagatatgatgactgag
cgttgtaaacaaatgtctcgaccaactaagttcgacaaggttgtacgtcgtgaaatttgt
caaataactaacagaggcactcaagtatttggctcacaatgccaaataactccaaagtac
caaccgaactatttgttagcattggtagaaaaggataatggagtaatcagtacttatgga
gtatgttatattgacacgtccattggtgatttttatattggcgaatttgaggatgacaaa
aattgttctcgactactgactttattgtcacattacatgcctgtcttagttttgtttgag
aaaagtactttgtccgaaaggacacggcatatattacgaacctcattggctgctatttta
aaagaaccaatttccagcgctgaggctatgaagtgtgatgcagaaaatacactcaagcat
ttagctgaaacttattatgccacatcaagtgaaaacaattggccacttatattgcgaaca
atgcaggacgaaaatgatcatttgggcttaactccgaaaaagggttatatattagcattg
aaagccttaggtgaatgtattcgttatatgaaaaaatgctatttggaagaaaaaatttta
ccaatggcacggtatcatttttatgaacctcccgatacgttgagcagcgatgttactgtg
aagtctactatttctaaaacaagtttgcctcgttcaacgatggtgcttgatgccacgaca
ctttcaaatttacgaattactggagaagagcactcactttatgcaactttggataactgc
tgtacaaaattcggcaaacgcttgcttcattattggctttgcgcacctagttgcgatcta
aatacaattttagaacgtcaaaatgctataacagatttgatggatcatcctgagctcttg
caggagcttcgcgcgttattaactccgatgccagattttgagcgacatttggcccaagta
catctttttggcaataaaacaataatgcaaaagcatccagacggacgtgctattttgttt
gaagaaaaattgtataataaaaaaaaaattcagaatttcatttcaatactcaaaggtttt
gaaatattaactcaaattcccgacatgttgaaagattgttcctctgttttgattaaacgt
atcactcaaacgtctgacaatggcggaatatttcccaagatgcatgaattacttcaattt
tttaataacgcttttaaccatgaggaagctgcaaaaactggagttgttgctcctgagaag
ggtgtagactccgattatgatgaatgcgaagctaaaattaaagatatcaatcaatcttta
caagattatcttaaagaacaagaaaaatttttcggatgtcgtttggcttactttggcaca
gacaaaaaacgattccagttggaagttcctgagagcaacgctcgtaaggcgggtaaagtc
tatcaattagaggggcaaaagaaaggaaacaaaccatgcagacgtttttctacaaatgaa
acaagggcatttctcaagcaaatgcagaatgctgaaatggaacgtgataatatacttaaa
gatctcgcacgtcgtattttcgaaaagttttcaaataattattccgtttggaaattgtgc
acggaatgcatttcaaatctagatgttctcagctctttagcagagtacgcacgtcagcaa
aatgtattgtgtattccagaatttattcaacctgaggataataactgtcaaccattcgtg
gatatagaagagggttatcatccatgcgtatcttctgatacttacataccaaatggtatt
gtacttggttctcctaatgttgcgccattgtccattttaaccggtcctaatatgggtggt
aaaagcactttgatgaggcaagttggactacttgccgtaatggcacaaattggttcacat
gtaccagctcagaagtacagactttccctagtagatagaatttttacgcgtttaggtgct
caggatgatatgttgtcgggacagagtacttttcttgttgaattaaatgaaacatcttta
atattaaaacacgccactgtacatagtttggtacttttggatgaattgggtcgtggcact
gccacttatgatggtactgctatagcagtttcagttgttaattatctggcagatattaaa
tgccgcacactattctcaacgcattatcataatttaattgatttctttcaaaaagatcaa
agaattactcttgggcatatggcatgtatggtggaaaatgaagatgatgatgatcctaca
caggaaactgttacatttttatataaatactcacctggtgcttgtccaacatcatacgga
tttaatgctgcaaagttggcaggtatgccaacgccaattatcaagagagcatatcagctc
tcgaagaaagtagaggctatagctttaaaacgaaaaattactgctaagattctgacttcc
gctggcggaggtttgtctgctgttactgacatacaaaatttactaagacaattcaaaaaa
tgcaatgtttga
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