Teleopsis dalmanni (Malaysian stalk-eyed fly): 119668201
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Entry
119668201 CDS
T09311
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119668201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tda03041
]
119668201
Spliceosome [BR:
tda03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
119668201
Complex C
U5 SnRNP specific factors
119668201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_16
TPR_2
FAT
TPR_CcmH_CycH
NatA_aux_su
TPR_21
ARM_TT21_C
Wzy_C_2
TPR_9
Ribosomal_60s
fn2
TPR_4
Motif
Other DBs
NCBI-GeneID:
119668201
NCBI-ProteinID:
XP_037933569
LinkDB
All DBs
Position
1:72635787..72639107
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AA seq
931 aa
AA seq
DB search
MSNITAAVIANRNKKHFLGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPP
AAKRKKKEEEEEEDEDLNDSNYDEFSGYSGSLFSKDPYDKDDEEADAIYDSIDKRMDEKR
KEYRDRRMREDLERYRQERPKIQQQFSDLKRSLANITVEEWSTIPEVGDSRNRKQRNPRA
EKFTPLPDSVLSRNLGGESSSTLDPTSGLASMVPGVATPGMLTPTGDLDLRKIGQARNTL
MNVKLSQVSDSVTGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPP
AWIASARLEEVTGKVVMARNLIMRGCEINPTSEDLWLEAARLQPPDTAKAVIAQAARHIP
TSVRIWIKAADLETETKAKRRVFRKALEHIPNSVRLWKAAVELEKPDDARILLSRAVECC
NTSVELWLALARLETYENARKVLNKARENIPTDRQIWTTAAKLEEANDNIHMVEKIIDRS
LTSLVANGVEINRDHWFQEAIEAEKSGAVHCCQAIIKAVIGIGVEEEDRKQTWIDDAEFC
AKENAFECTRAVYAHALQVFPSKKSIWLRAAYFEKNHGTRESLEALLQRAVAHCPKSEVL
WLMGAKSKWLAGDVPAARGILSLAFQANPNSEDIWLAAVKLESENAEYERARRLLAKARA
SAPTPRVMMKSARLEWALDRLDEALRLLDEAVKVFPDFAKLWMMKGQIEEQQRKIDDAAV
TYTDGIKKCPTSISLWLLSARLEERKGTLTKARSILERGRLRNPKTPILWLEAIRVELRA
GLKEIASTMMARALQECSDAGELWAESIFLEAKPLRKTKSVDALKKCEHDPHVLLAVSKL
FWSEHKFTKCRDWFNRTVKIDSDLGDAWAYFYKFELLHGTEEQQNEVLQRCITAEPKHGE
AWCRVSKNIKNWCFKTPDVLKAVVQELTIPV
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacataacagcagcggtaatagcaaaccgaaataaaaaacattttcttggtgtc
ccagcaccattaggttatgttgctggtgtaggacgcggtgctactggttttacaacacgt
tctgatattggtcccgcacgagatgcaaatgatgtctccgatgaccggcatgcgccacca
gctgcaaagcgtaaaaagaaagaagaagaagaggaggaagatgaggatttaaatgattca
aattatgatgaatttagtggttatagtggatcattgttctcaaaagatccttatgataaa
gatgacgaagaagcagatgcaatatatgactcaattgataaacgcatggatgagaaacgt
aaagagtatagagaccgcaggatgcgtgaagatttggaacgttatcgtcaggaacgacca
aaaattcagcaacaattttctgatttaaaacgttcacttgcaaatatcaccgttgaagaa
tggtcaaccattccggaagtaggtgacagtcgtaatcgtaaacaacgaaatccacgtgct
gaaaagtttacaccactgccggacagtgtgttatcacgtaatttgggtggtgaaagcagt
tcgacacttgatccaacgtctggcttagcttcaatggtacctggcgtagctacaccaggt
atgttaacacccactggcgatttggatttacgtaaaattggtcaagctcgtaatacattg
atgaatgtgaaactctctcaagtgtcggattctgttactggtcaaacggttgtagatcct
aaaggatatttgactgatttgcaaagtatgataccaacatatggtggcgatatcaatgac
ataaaaaaagcgcgtttacttttgaaaagtgtgcgtgaaacaaatcctaaccatccacct
gcttggatagcatcagctcgtttggaagaagtgactggcaaagtagttatggcgcgtaat
ctcataatgcgtggctgtgaaataaatccaacatcagaggatttgtggttggaggcagca
cgtttgcaaccgccagacactgcaaaggcagttatagcacaagcagcaagacacattcca
acatcggtgcgtatatggattaaggcagctgatctcgaaacggaaacaaaagccaagcga
cgcgtattccgcaaggcactagaacatatacccaattctgtgcgtttgtggaaagctgca
gttgagttagaaaaaccggatgatgccagaattttgttatcacgtgctgtcgagtgttgc
aacacgagtgttgaattgtggttggcgttggcacgtttggaaacgtatgagaacgcacgt
aaagtgcttaataaagcacgcgaaaacataccaactgaccgacagatttggacgactgca
gcaaaattggaggaggcgaatgataatatacacatggtagagaagattattgatcgttcg
ttaacttcattggttgcgaatggtgtggaaataaatcgtgatcactggttccaggaagcg
attgaagcagagaaatctggcgcagtacactgttgtcaagccataattaaagctgtaatt
ggtattggcgtggaggaggaagatcgtaagcaaacctggatcgatgatgcggaattttgt
gccaaagaaaatgcttttgaatgtacacgtgcggtttatgcacatgctttgcaagtcttt
ccatcgaagaagagtatttggttgcgtgctgcttactttgaaaaaaatcatggcacaagg
gaatcattagaagctttactgcaacgtgcagttgcgcactgtccaaaatctgaagtcctg
tggttaatgggtgcaaaatccaaatggttagctggtgatgtaccagcagcacgtgggatt
ttatcgctggctttccaagctaatcccaattctgaagatatttggttggctgctgttaag
ttagaatctgaaaatgcagaatacgaaagagcacgacgtttgctggcaaaagctcgtgca
tctgctccaacaccacgtgttatgatgaaatcggcacgtttagaatgggcattggatcgt
ttggatgaagcgttacgtttattggatgaggcagttaaagtatttcctgatttcgcaaaa
ttatggatgatgaaaggacaaattgaagaacaacagagaaaaattgatgatgctgcagtc
acatatactgatggcattaaaaagtgtcctacttcaatttctctatggttattgtctgca
cgtctggaggaacgtaaaggtacactaactaaagcacgttcgatattggagagaggacgt
ttgcgtaatcctaaaactcctatactttggttggaagcaattcgtgtggaactgcgtgca
ggcttgaaggaaattgctagtactatgatggcacgtgctttgcaagagtgttccgatgca
ggcgaactatgggctgaatcaatatttttggaagctaaaccattaaggaaaacgaaatct
gtcgatgctttaaagaaatgtgaacacgacccacatgtgctgcttgccgtatcaaagttg
ttttggtcggaacataaattcacaaagtgccgtgattggtttaatcgcacagtaaagatc
gattctgatttaggcgatgcttgggcttatttttataaattcgaattgttacacggcacc
gaagaacaacagaatgaagtgctgcagcgttgcattaccgcggaaccaaaacacggagag
gcttggtgtcgtgtcagtaaaaacataaagaattggtgtttcaaaacgccggatgtgctg
aaagctgtagttcaggagctcactatacctgtttaa
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