Teleopsis dalmanni (Malaysian stalk-eyed fly): 119668496
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Entry
119668496 CDS
T09311
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119668496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tda04121
]
119668496
Enzymes [BR:
tda01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119668496
Ubiquitin system [BR:
tda04121
]
Ubiquitin ligases (E3)
HECT type E3
119668496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
119668496
NCBI-ProteinID:
XP_037933953
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All DBs
Position
1:complement(127502351..127507987)
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AA seq
1058 aa
AA seq
DB search
MSIYCWGNTVHGELGLGGIEEEHILIPRKMSWKPDTSICHIACGKWHTLFLTVDGKVYSC
GNNDNGQLGQLGELPTKRPRMSKFKLIPELKNYKITKIACGAQHSVALSEWGQIFAWGEN
HCGQLGLSQLDDTIPTPKIIKLLIPKIIIQIACGNNHTLCLTSCGELYSWGSNAFGQLGV
APSNVKKQSNSPQLVTTIQGIPIAYIACGGNHSFIISKSGAVYGWGLNNKGQLGLSDEEN
RCYPTHLKTLRNLAVRYISCGEEFSTFLTNDGGVFTCGSGAYGQLGHGGKSNEVLPRMVC
ELMGSTITQIACGLRHTLALVPSRGRVYGFGLGCCGQLGSRVTNSVSVPQVVIGPWVSPS
GSALIKSENKDNVSIKEIFSGGDQSLCITTDFESKIPSVDFRIYSSSTQILEITNDLAMQ
CAAVQKDILVDMDLITIVEHTFKSMACWNSSFLLDNSKHFCCSIKNNGVNFLDASTVFSY
LRKIENESLKNIIFEKIYGDLMESLTTVPADFETLRIYLTLPLYHEFINSKKYEKLHTPF
SNAVDRLTEIPKKIIRSWWTNAPCDWFENIVSNYKNVVIYIITIKMPPNSSNNPTKRCVT
YNYHLLTALNLLGFLHYINHKLRKEKICYEIFNWPELMEYVDIQQDYVYWLFDKSPEQFN
ICNYPFLFDAATKTTILQTDQALQMHKAIQDSHNEALLSCFSNCTTSTQYVVLNVTRENI
VQDTLREILNYKEIDLKKPLKIKFQDEEAEDAGGVRKEFFMLLLKDLLDPKYGMFKIYEE
SRALWFADVTFEGSDMYVLIGVICGLAIYNFTIINVPFPLALYKKLLEEPVDISDLRDLS
TELANSMQSILDYEGDDFEEIFDLNFEISQDIFGEVTSVPLKPGGENIKVTSLNRKEFVD
LYIDFIFNKSVDNQFKAFQAGFMKVCLGRVLQLFKPHELMAVVTGNEEYDWHAFEESCEY
KNGYTSSDQTVRWFWEVLHELPEVEKKKFLLYLTGSDRIPVQGMKAVKINIQPTSDDKFL
PVAHTCFNLLDLPRYKTKERLKYKLLQAIQQTQGFSIV
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgtccatatactgttgggggaatactgtccatggggagctcggacttggaggtattgaa
gaagagcatatactgatacctcgcaaaatgtcttggaagcctgacacaagtatatgccac
atagcatgtggaaaatggcatacactttttcttacagttgatggaaaagtgtattcttgt
ggtaacaatgataatggtcaattaggccaattaggtgaactgccaacgaaacggccacgt
atgtctaagtttaagcttataccagagttaaaaaattataagataacaaaaatcgcttgc
ggtgcacagcattctgtagctttaagcgaatggggacagatatttgcatggggtgagaat
cactgtggccaattaggtttaagtcaacttgatgatacgataccaactcctaaaattata
aagttacttatacctaaaataataatacaaattgcttgtggaaataatcatactttatgc
ttgacaagttgtggtgaattatattcctgggggagcaatgcgtttggtcagctgggagta
gcaccttcaaatgtaaaaaaacagtcgaattctccacaattagttacaacaatacaagga
attccaatagcatacatagcatgtggtgggaatcattcgtttattatatcaaaatcgggt
gcagtatatggttggggactgaataataaaggccaattaggacttagtgacgaagaaaat
cgatgctatccaacgcatttaaaaactttacgaaatttagctgtacgctatatatcctgc
ggagaagaattttctacatttttaacaaatgatggaggagtatttacatgcggaagtggt
gcttatggtcaattgggccatggcggtaaatccaatgaagtcttgccgcgtatggtgtgc
gaacttatgggtagtactataacgcaaattgcatgtggtttacgacatactttagcttta
gtgccgtctcgtggtcgagtttacggctttggccttggatgctgtggacaattaggttcg
cgtgttactaatagtgttagtgtgcctcaagttgtgataggaccttgggtctcaccaagt
ggatcagccttaatcaaaagcgaaaataaggataatgtttcaattaaagaaatattttcc
ggtggagatcaatcactttgtataacgactgattttgaaagcaaaattccatccgtagat
ttccgaatctatagttcttcaactcaaatattggaaatcaccaacgatttggctatgcag
tgtgctgcagttcagaaggatattttagttgacatggatttaataactatagttgagcat
actttcaaaagtatggcttgttggaacagttcattccttttagataatagcaaacatttt
tgttgctccataaaaaacaatggcgtaaattttctggatgcctctactgtgttttcttat
ttacgtaaaattgaaaatgaaagtttaaaaaatattatattcgaaaaaatttacggagat
ttgatggaatcattaacgacagtgccagcagatttcgaaaccttacgtatatacttaaca
ttgccattatatcatgaatttataaattctaaaaagtatgaaaaattgcatacaccattt
agcaatgctgttgaccgacttactgaaattccaaagaaaatcattcgctcttggtggacc
aacgccccatgtgactggttcgaaaatattgtttctaattataaaaatgttgtgatatat
attataacaatcaaaatgccaccaaattcttctaataatcctactaaaagatgcgtcacc
tataattatcatttacttacggcattaaatctattaggttttttgcattatatcaatcac
aaactacggaaagaaaaaatatgttacgagatttttaattggccggaacttatggaatat
gttgatatacaacaagattatgtatattggttgttcgataaatctccggagcaattcaat
atatgtaattatccatttttatttgatgcagcgactaaaacaacaattctacaaactgat
caagcattacaaatgcataaagccatacaagattcacataatgaggccttattgtcatgt
ttttcaaattgtaccaccagtacacaatacgttgtattaaatgttactagagagaatata
gtacaagatactttacgtgaaatactcaattataaagaaatagatttgaaaaaaccatta
aagataaaatttcaggatgaagaggccgaagatgctggtggagtaagaaaagaattcttt
atgttactcttaaaagatctacttgacccaaaatatggaatgtttaaaatatatgaagaa
agtcgtgcactttggtttgcggatgtgacttttgagggtagcgacatgtacgttttaatt
ggtgtcatttgcggtcttgcaatctataattttactattataaatgtgccgtttccactt
gctctatacaagaaactgcttgaagaacctgttgatataagcgatttacgcgatttatct
actgaattagctaattcaatgcagagtatacttgattatgagggtgatgactttgaagaa
atatttgatttaaattttgaaatatcgcaagatatctttggagaagtaacatcagtacca
cttaagcctggtggcgaaaatataaaagtgacaagcctaaatagaaaagaatttgttgac
ttgtatattgatttcatatttaataaatcagtggataatcaatttaaagcatttcaggct
ggatttatgaaagtttgtttgggaagagttttgcaattatttaaacctcatgaacttatg
gcagttgttacaggtaacgaggaatatgattggcacgcatttgaggagagttgtgaatac
aaaaatggttacacttcatcagatcagacggtacgatggttttgggaagtgcttcatgag
ctgcctgaagttgaaaaaaagaaatttttattgtatttaactggaagtgatagaatacct
gtacaaggcatgaaagctgtaaaaatcaatatacagccaacatcggacgataagttttta
ccagtagcgcatacgtgtttcaatctgctcgatttgcctcgttacaaaactaaggaaaga
ctgaaatacaaactactacaagcaatacaacaaactcagggttttagtattgtataa
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