Teleopsis dalmanni (Malaysian stalk-eyed fly): 119668528
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Entry
119668528 CDS
T09311
Name
(RefSeq) ATP-dependent RNA helicase DDX42-like
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119668528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tda03041
]
119668528
Enzymes [BR:
tda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119668528
Spliceosome [BR:
tda03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
119668528
Complex B
119668528
Complex C
U2 SnRNP specific factors
119668528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
DUF1699
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
119668528
NCBI-ProteinID:
XP_037933994
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All DBs
Position
1:complement(24810563..24813923)
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AA seq
797 aa
AA seq
DB search
MSGYRGIGGGGFPYKTNPNRTGGASMNAVPPPSSLSGRGYQKGSSSANSGNSSAPTSSVS
KHGYTTLESISQFTSSQNALGKRKAHTEDEYFDDDDEQVPEMAYIPAPGSPGAKTQNKDK
DSDSEDDTLDMFMAGIEQQVEKEKKRKDTVSTNSNTSAPSTDIKNVKGVRGDIEDEDDEE
SYYRYLEENPNLGMRDDGSDIEIEYDEDGNPIPPPRKKDIDPLPVIYHSEIEYESFEKNF
YTPHEEIANLNDEKVRDLRKTLGVKVTGAEPPKPVTSFAHFGFDESLMKAVRKAEYTQPT
PIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRELREGDGPIGLILAPTRE
LSLQIYNEAKKFGKVYNINVVCCYGGGSKWEQSKALEQGAEIVVATPGRMIDMVKIKATN
LRRVTFLVLDEADRMFHMGFEPQVRSICNHVRPDRQTLLFSATFKKRIERLARDVLMDPI
RIVQGDLNEANQDITQYVFVFPNPLQKWNWLLCHLVKFLSEGSILIFVTKKADAETVANN
LLVKEQNCLLLHGDMDQADRNKVITQFKKKECDILVATDVAARGLDIPHIRNVVNYDIAR
DIDTHTHRIGRTGRAGEKGTAYTLVTEKDKEFAGHLVRNLEGADQEVPEDLMQLAMKSSW
FRSSRFKHGKGKKLTVGGTGLGYRERGGNSNTKPPAYSSESTSSYTSTSKSISAAGPATN
RYAAMREAFRAQYMSQFRASSDRTWEQTVPESGVFAAPAPPPPPPGGGKPTSSSSTVGGS
SNNNDSSRSRAKKSRWN
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctatcgtggtatcggcggtggcggatttccatataaaacaaatccaaatcgc
actggtggtgcttcgatgaatgccgtgccgccgccgtcttcattaagcggacgtggttat
caaaaaggtagtagcagtgcaaatagcggtaacagctcggcacctacttctagtgtttct
aaacatggctacacaacattagaatctataagccaatttacaagctcacaaaatgcatta
ggaaagcgaaaagcacataccgaggatgagtattttgatgatgatgacgagcaagttccc
gaaatggcatacataccggctcctggctcaccgggtgctaaaacgcaaaacaaagataaa
gatagcgattcagaagatgatacacttgatatgtttatggcaggcatcgaacaacaagta
gaaaaggagaaaaaaagaaaggatactgtgtcaacaaattctaatactagtgctccttcc
accgatattaaaaacgtcaaaggtgtacgtggtgatatcgaagatgaggatgacgaagaa
agttactatcgctatcttgaggagaatccaaatcttggtatgcgagatgatggttcagat
atcgaaattgaatatgatgaagatggtaatcctataccaccacctagaaaaaaagatatt
gatccattgccagtaatttatcattctgaaattgaatatgaatcgtttgaaaaaaatttt
tataccccccatgaagaaatagcaaatttgaatgatgaaaaagtgcgtgatttgcgtaaa
actttaggagtcaaagttactggagctgaaccaccaaaaccggtcacgtcatttgcacat
ttcggcttcgacgaaagtctaatgaaagccgtacgaaaagctgagtatacccaaccgacg
cccatacaagcgcaagcggtaccaactgcactgtctggacgtgacattattggcatagca
aagactggctccggtaaaaccgccgcgtttatttggccgatgttagtacatataatggat
cagcgagagttacgtgaaggtgatggtccaattggacttattttggcacctactcgtgaa
ctgtctttgcaaatatacaatgaagcaaagaaatttggtaaggtctacaacattaatgtg
gtctgttgttatggtggtggttcaaagtgggaacaaagtaaagcacttgaacagggtgcg
gaaatcgttgttgctacgccaggtcgcatgattgatatggtcaaaattaaggcgacaaac
ttacgtagggtaacatttttggtactcgatgaagcggatcgtatgtttcatatgggcttt
gaaccacaagtgcgatcaatttgtaaccatgtacgtccggatcgtcaaaccttgctcttt
tcggcgacatttaaaaagcgtatagaacgtttggcacgtgatgttcttatggatccaata
cgtattgtgcagggggatttaaatgaagccaatcaggacataacacaatatgtttttgtg
tttcccaatccattacagaaatggaattggctgctttgtcatttagtgaagtttttgtcc
gaaggcagtatattgatatttgtcactaaaaaagctgatgctgaaacagtagctaataat
ttgttggtgaaagagcaaaattgtttattattgcatggtgacatggatcaagctgatcgt
aataaagtaataacacaatttaagaaaaaagaatgtgacatactggtagcaactgatgtt
gctgctcgtggtctagatataccacacattcgtaatgtagtcaattatgatattgcacga
gatatagacacacatacacatcgaattggaagaactggccgtgctggagagaaaggtaca
gcttacacattagttactgaaaaagataaagagtttgctggacatttagtgcgaaactta
gaaggtgcagatcaggaagtaccagaagatttaatgcaattagctatgaaaagctcatgg
tttcgtagttcacgatttaaacatggtaaaggtaagaaacttactgttggaggtactggg
ttaggttatcgagaacgtggcggaaattccaataccaaacccccagcatattcatctgaa
agtaccagttcttatacatcaacaagcaaatcaatttccgctgctggacctgctacgaat
cgttatgctgctatgcgtgaagcttttcgtgctcagtacatgtcgcaatttcgtgcttcg
agtgatagaacttgggaacaaactgttcctgaaagtggagtttttgctgcaccagcacca
ccgccacctccgccaggaggaggaaaaccaacttcatcatcaagcacagttggcggtagt
agcaacaataatgactccagtcgatctagagcgaaaaaaagccgttggaattag
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