Teleopsis dalmanni (Malaysian stalk-eyed fly): 119668678
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Entry
119668678 CDS
T09311
Name
(RefSeq) E3 ubiquitin-protein ligase parkin isoform X1
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda04120
Ubiquitin mediated proteolysis
tda04137
Mitophagy - animal
tda04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119668678
04120 Ubiquitin mediated proteolysis
119668678
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
119668678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tda04131
]
119668678
04121 Ubiquitin system [BR:
tda04121
]
119668678
03029 Mitochondrial biogenesis [BR:
tda03029
]
119668678
Enzymes [BR:
tda01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
119668678
Membrane trafficking [BR:
tda04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
119668678
Aggrephagy
Other aggrephagy associated proteins
119668678
Xenophagy
Other xenophagy associated proteins
119668678
Ubiquitin system [BR:
tda04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
119668678
Mitochondrial biogenesis [BR:
tda03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
119668678
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
IBR_2
zf-RING_12
ubiquitin
IBR_1
IBR
Rad60-SLD
Rcat_RNF216
Ubiquitin_5
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
119668678
NCBI-ProteinID:
XP_037934191
LinkDB
All DBs
Position
1:16419595..16421713
Genome browser
AA seq
482 aa
AA seq
DB search
MSLNLFEFLTSLIRRMLALLSFGQKTITNTLNVYVKTNTGRTLSVNLEPKWDIKNVKEIV
ATELGLQPDEMKIIFAGKELSDATTIEECDLGQQSVLHAIRLRPQQQRQRMHSTVMEEES
LSIEEPSKPLCETLVDLQLQSEERVNINEEDRERTKAHFFVHCTQCNKLCRGKLRVRCSL
CKGGAFTVHRDPECWDDVLKSRRITGHCETQEVACVDNDSGDPPFTEFYFKCAEHVSGGE
TDFAAPLNLLKINIKDVPCLACTDVSETVLVFPCESKHVTCIDCFLQFCRSRLLERQFMP
HPEIGYTLACPAGCENSFIEEIHHFKLLSRDEYDRYQRFATEEYVLQAGGVLCPQPGCGM
GLLADPECRKITCQIGCGYVFCRNCLQGYHLGDCLLDESNTSPAGSCEYAVDPNRAADAR
WDEASKVTIKVSTKPCPKCRTPTERDGGCMHMVCTRAGCGFEWCWICQTEWTRDCMGAHW
FG
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaaatttatttgaattcttgaccagcttaatacgcagaatgctagcactcttg
tcctttggccaaaaaacaataaccaacacactcaacgtatatgtaaaaaccaacaccgga
cgaacgttatcagttaatttggaaccaaaatgggatataaagaacgtgaaggaaattgtg
gctactgaacttggtctgcaaccagacgaaatgaaaataatttttgcaggaaaggagctg
agtgatgcaactaccattgaggaatgcgatttgggtcaacaaagtgtactacatgctata
cgtttgcgcccacagcagcaacgtcaacgtatgcattcaactgttatggaagaagaatcc
ttatcaatagaagagccttctaagccattatgtgaaacactggttgatttacagttgcaa
agtgaagaacgtgtgaatattaatgaagaagatcgcgaaagaacaaaggctcacttcttt
gtacattgcacacaatgcaacaaactctgtagaggaaaactacgtgtgcgttgttcactt
tgtaaaggcggtgcatttaccgtacatcgtgatcctgaatgctgggatgatgtgcttaag
tctagacgtattactggtcattgcgaaactcaagaagtagcttgtgtggataatgattct
ggcgatccaccatttacagagttctatttcaagtgtgctgaacacgtatctggtggtgaa
acagactttgcagcccctttaaatttgctaaaaattaatataaaagatgttccatgctta
gcgtgcaccgatgtaagtgaaacggttctagtctttccatgtgaatcaaagcatgttacc
tgcattgattgttttttgcaattctgtcgttcacgcttgttagaacgacaatttatgcct
catccggaaattggttatacattagcttgtcctgccggctgtgaaaactcttttattgaa
gaaatacatcattttaagttattgtcacgtgatgaatatgaccgttatcaacgttttgca
actgaagaatatgttttacaagcgggaggtgtgttatgtccacaaccgggctgtggtatg
ggtcttttagctgatccagaatgtcgtaagataacatgccaaattggatgtggttatgtt
ttctgccgaaattgccttcaaggctatcacttgggtgattgtttgctggatgagagtaat
actagtccagcaggatcatgtgaatatgctgtagacccaaatagagctgctgacgctcgt
tgggatgaagcaagtaaagttactattaaagtctcaacaaaaccttgtccaaagtgtcgt
acacctactgagagggatggaggttgcatgcacatggtatgtacacgcgcgggttgtggt
tttgaatggtgttggatatgtcagacagagtggactagagattgcatgggcgctcactgg
tttggatag
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