Teleopsis dalmanni (Malaysian stalk-eyed fly): 119669196
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Entry
119669196 CDS
T09311
Name
(RefSeq) replication factor C subunit 5-like isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03030
DNA replication
tda03410
Base excision repair
tda03420
Nucleotide excision repair
tda03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119669196
03410 Base excision repair
119669196
03420 Nucleotide excision repair
119669196
03430 Mismatch repair
119669196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tda03032
]
119669196
03036 Chromosome and associated proteins [BR:
tda03036
]
119669196
03400 DNA repair and recombination proteins [BR:
tda03400
]
119669196
DNA replication proteins [BR:
tda03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119669196
DNA Replication Termination Factors
ELG1-RFC complex
119669196
Chromosome and associated proteins [BR:
tda03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
119669196
DNA repair and recombination proteins [BR:
tda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119669196
Check point factors
HRAD17(Rad24)-RFC complex
119669196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_22
AAA_14
AAA_11
RuvB_N
ResIII
DUF815
AAA_16
AAA_assoc_2
RCF1-5-like_lid
DEAD
AAA_5
AAA_7
AAA_24
PhoH
AAA_30
AAA_19
Mg_chelatase
TIP49
T2SSE
AAA_3
bpMoxR
Motif
Other DBs
NCBI-GeneID:
119669196
NCBI-ProteinID:
XP_037934935
LinkDB
All DBs
Position
1:144860545..144862397
Genome browser
AA seq
356 aa
AA seq
DB search
MVEESAEKIVRMPWVEKYRPAKLDDLISHEEIISTINRFINQKQLPHLLFYGPPGTGKTS
TILACAKQLYTPAQFKSMVLELNASDDRGINIVRGQILNFASTRTIFSGTFKLIILDEAD
AMTNDAQNALRRIIEKYTENVRFCVICNYLSKIIPAVQSRCTRFRFAPLSPEQILPRLDK
IVEMEKLNVTEDGKKALMTLSKGDMRKVLNVLQSTSMAFDIVNEDNVYTCVGHPLRKDIE
HILQTLMSTENFETAYNGRHKLHMFNNNWRTIQIIFLLLLEIQGIKSVKGLALEDILTEL
HQFIMRIEIPMSVMNKLIIKLASIEERLAKGCSEGPQTTALVSAFFICREMVTMES
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggttgaagaaagtgcagaaaaaattgtccgtatgccatgggtagaaaaatatcgaccg
gcaaaattggacgatttgatttcacatgaagaaattatttctacaattaatagattcatc
aatcaaaaacagctgccccacctgttgttttatggaccaccaggcacaggaaagacaagt
acaatattagcgtgtgcgaagcaactttacactccagctcagtttaaatccatggtactt
gaattaaatgcatctgatgatcgtggcattaatatagtgcgtggtcaaatacttaatttt
gcttctacgcgaacgattttcagtggtacatttaaattgattatattggacgaagccgat
gccatgaccaatgatgcacagaatgccttgcgtcgtatcattgaaaagtacacagaaaat
gtacgattttgtgttatttgcaattatctgagcaaaattattcctgccgtgcagtcgcgt
tgtacgcgttttcgttttgcaccattgtccccagagcagatattacctcgattggataaa
attgttgaaatggaaaagctaaatgtcactgaagatggtaaaaaagcgctaatgactctg
tcaaaaggtgatatgcgtaaagtgcttaacgtactgcaaagtacatcaatggcatttgat
atcgtcaatgaggataacgtttacacttgcgttggtcatcctttgcgcaaagacattgaa
catattttgcaaactttaatgtcaacagagaattttgaaactgcttataatggtaggcat
aaattacacatgtttaataataattggcgaaccattcaaattatttttttattactttta
gaaatacaaggtatcaaatcagtaaaaggcttggctttggaagatatactaactgaacta
catcaatttattatgcgaattgaaattccaatgagcgtgatgaacaaattaattattaaa
ttggctagcattgaagaacgtctcgcaaaaggctgcagtgaaggtcctcaaacaacagca
ttagtttcagcattttttatttgtcgcgaaatggttacaatggaaagttaa
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