Teleopsis dalmanni (Malaysian stalk-eyed fly): 119669235
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Entry
119669235 CDS
T09311
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03018
RNA degradation
tda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119669235
09123 Folding, sorting and degradation
03018 RNA degradation
119669235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tda03019
]
119669235
03041 Spliceosome [BR:
tda03041
]
119669235
Messenger RNA biogenesis [BR:
tda03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119669235
mRNA degradation factors
5'-3' decay
Lsm complex
119669235
Spliceosome [BR:
tda03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
119669235
Complex C
U2 snRNP components
119669235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
119669235
NCBI-ProteinID:
XP_037934989
LinkDB
All DBs
Position
1:complement(927280..927802)
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AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVIVELKNDLSICGTLHSVDQYLNIKLTDIQVTDQDKYPHMLSVKNC
FIRGSVVRYVQLPGEEVDTQLLQDAARKEAVVNTR
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgttgttttattctttctttaagtctcttgttggcaaagacgtaattgtggagttaaaa
aatgacttaagcatatgtggcacattacattctgttgatcaatatctaaatattaaacta
acagatatacaggtaacagatcaggataaatatccacacatgttgtcagtgaagaactgt
tttattcgtggctctgtggtgcgctacgttcaactgcctggagaggaagtggacacacaa
ttgttgcaagacgccgctcgaaaagaagctgtcgttaatacacgttaa
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