Teleopsis dalmanni (Malaysian stalk-eyed fly): 119669520
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Entry
119669520 CDS
T09311
Name
(RefSeq) exosome complex component RRP4-like
KO
K03679
exosome complex component RRP4
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119669520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tda03019
]
119669520
Messenger RNA biogenesis [BR:
tda03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119669520
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
119669520
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GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
EXOSC1
ECR1_N_2
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
119669520
NCBI-ProteinID:
XP_037935362
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Position
1:156121650..156122684
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AA seq
299 aa
AA seq
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MEEGSNVIIRLAIDVCDESKTKKRTGKVPRIYTPGEIVVSESGFMRGHGTYNEENDIKSS
VAGVLERVNRLISIRPRKSRYVGEIGDVVVARVTEVQQKRWKLDTNSSVDSVLLISSVNL
PGGELRRRSAEDEHMMRKYLQEGDLVSAEVQNIFEEGSLSLYTRSLKYGKLSQGVLVKVY
PSLVKRCKAHFHNLSCGASIILGNNGYIWIQPTSIIQDGGDGGFTQNLSEITPLSDLRTI
SRLRNCILALAKCNIMIYDTSILYAYEESWKYGERDLLQMENIQEVGKATCQRLNQLQS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggaagagggtagtaatgtaataatacgtttagcaattgatgtttgtgatgaatcaaaa
actaaaaaacgtactggaaaagttccacgcatatatacacctggtgagattgttgtatct
gagtctggatttatgagaggacatggcacatacaatgaggagaacgatataaaatcatca
gtagcaggtgttttagagcgagttaatagattaatttctattagaccacgaaaatccaga
tatgttggtgaaattggtgacgttgtggtagcacgagtaactgaagtacaacaaaaacgt
tggaaattggacaccaactcaagtgtcgattctgttctattgatatcatcagtcaatcta
ccaggtggtgaattgcgtcgacgttcagcagaagatgaacatatgatgagaaaatattta
caagaaggcgatttagtttcagcagaagtacaaaatatttttgaagaaggttcactttca
ttatatactcgttctttgaaatatggaaaactatctcaaggagtgcttgttaaagtgtat
ccatctttggtgaaaagatgtaaagcacattttcacaacttatcatgtggtgcatcaatt
atattgggcaataatggctacatatggatacaacccacatcaatcattcaagatggtggc
gatggtggttttacacaaaatctaagtgaaatcacaccgctatcagatttgcgtacaatt
tctcgtttacgcaactgcattttagcattagctaaatgcaacattatgatatacgacacc
agcatactttacgcctacgaggaatcttggaaatatggtgaacgagacttattgcaaatg
gagaatatacaggaagtgggcaaagcaacatgtcaaagattaaatcaacttcaaagttaa
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