Teleopsis dalmanni (Malaysian stalk-eyed fly): 119670438
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Entry
119670438 CDS
T09311
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K19719
collagen type II alpha
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119670438
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tda00536
]
119670438
Glycosaminoglycan binding proteins [BR:
tda00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119670438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
TILa
Galanin
Motif
Other DBs
NCBI-GeneID:
119670438
NCBI-ProteinID:
XP_037936625
LinkDB
All DBs
Position
1:complement(179352951..179358649)
Genome browser
AA seq
1551 aa
AA seq
DB search
MEVRLWKLLVFVICICIVQECIFAEQLTSKRSKVPTNKKVRKSRKRLNERPQAEEARPQA
DIPALEEFETYDYANYDEVDEDAVAIGEVNKFETHQEVAASATPRSRSPQNSPVTFSCNF
EGNWYREYEEFTSEQNGCTSTCTCLNGKVNCKTSSDCITLNSDDKQPLNERITTLRTPTI
QRTTATPTVSYNVGTGPRGLPGYPGAQGQSGDAGLPGIPGNPGAPGNPGPPGPIPDMSFY
HQQLAAEYANTDKGPGAPPFVPEQLQYVQSSVGQTGPRGPPGNVGPPGPQGFQGVRGEAG
EPGQQGPPGLIGPRGMPGTPGKDGSPGEDGEPGIAGAAGIPGPRGLPGMTGVPGLKGHRG
LPGLDGGKGESGAPGEKGATGGVGPIGAPGSIGPAGTRGERGREGPPGPPGARGLDGNAG
TPGQTGSVGKPGPPGFPGVHGAKGDMGHQGPKGDQGLQGPRGEAGRPGDVGEPGVAGPPG
KDGFPGEKGSMGAPGLVGPQGFPGARGSDGMQGSTGEPGIKGAPGQPGERGYKGDAGIKG
DAGQPGPRGVPGANGPEGKRGKRGMRGPTGPSGPTGERGTPGLPGIPGPDGPIGPKGIQG
DRGIQGPTGIKGSSGDVGPTGTPGLQGLRGLPGRAGIQGNAGPPGERGVPGADGKPGEQG
LQGLQGIPGPMGIPGDKGFTGEPGKNGEPGVAGPPGPRGDNGKDGLPGAQGAPGPQGPDG
IRGEPGSVGPRGYQGLPGAPGSPGVSGKDGQPGPPGPMGPMGSAGLRGERGFPGERGPVG
QPGTPGERGEPGVAGPDGAPGFPGKPGAKGHMGSPGMIGLPGLKGHAGPAGEKGERGSPG
PFGPEGPAGRPGDRGPQGNVGPPGAPGESGERGTPGNPGPPGEQGTSGLPGERGPIGPQG
SPGFPGSPGVAGLPGAKGDRGLMGIKGEQGNTGLHGTPGEQGLPGPIGLVGPKGARGEIG
LRGEPGISGLPGRPGEPGVAGQPGNQGPPGIMGLTGHKGNPGEAGRPGLHGPQGLQGPQG
LEGPKGEAGSEGPVGPHGSSGPPGQPGERGIPGLPGPPGAIGMQGLRGSVGEPGQQGKTG
KDGEAGPPGLQGPLGPPGQPGEQGPEGPSGKQGPPGIQGRIGDKGPPGQIGNSGPPGNPG
LPGPPGPMGPMGLIGERGVKGEIGPSGIEGPIGPRGKVGPPGPEGVKGDVGELGPKGIKG
HRGFTGLQGLQGNPGIKGDNGLPGVPGAPGKPGEIGMRGPQGRDGSSGLQGAPGAPGPRG
LSGTDGKTGQMGPAGPPGPPGPPGEALGYDAAAIAALLSQGQTKGVDTMGDQPMDIFTDD
LTNEEKHALVMKAFQHVQASFERLRRPNGQKTAPAKTCRDLFAAYPEYATGEYWIDPNEG
DIRDAILVQCDRTTRGTCIIPQPKETAAISYAGREKEAWLSEMPTGMKITYKTDSMQLGF
LQLLSAKATQTIIFHCKNTIAFKDDSDNSYSRGLKLLSWNDAELTPNGPQRLRYETESDE
CRHRLNKWAKTVITYKTEKSQRLPIVDIAVRDLGDANQQFRIELGPVCFHN
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcagactttggaaacttcttgtatttgtgatatgtatttgtattgttcaagaa
tgtatattcgctgagcagttaacctcaaaaagaagtaaagtaccaactaacaagaaagta
aggaaatcaagaaaacgcttaaacgaacgaccgcaagcggaggaagctagaccacaagct
gatataccggcgctagaggagtttgaaacctatgattatgcaaattacgatgaagtagat
gaggatgccgttgccataggagaagtaaataaatttgagactcatcaagaggtggctgca
tcagcaacaccaagatcacgttcaccacaaaattcgcctgttactttctcctgtaatttc
gaaggtaattggtatcgggaatatgaagagtttacgagtgaacaaaatggctgcactagt
acttgcacttgcttaaatggcaaagtaaactgtaaaacttccagtgattgtattacttta
aactctgatgacaagcaaccacttaatgaacgtataactacgttacgcacacccacaata
cagcgcacaactgctactcctacagtgtcatataatgttggtactggtccacgaggttta
ccaggttatccaggcgcgcagggtcaatcaggtgatgctggactacccggcatacccggc
aatcctggtgcacctggaaatccaggtccacccggtccgatacctgatatgagcttttat
catcagcaattagcagcagaatatgccaacacagataaaggccctggtgcaccgccattt
gttcccgaacaattacaatatgttcaatcatccgttggtcaaactggtccacgtggtcca
cctggtaatgtgggtcctccggggccacaaggttttcaaggtgtacgtggtgaagcaggt
gagccaggtcagcaaggtccacctgggctaataggaccacgaggtatgcctggtactcct
ggtaaagatgggtcaccaggtgaagatggtgagcctggaattgctggtgctgctggcata
cctggaccaaggggcttacctggcatgacaggagttccaggattaaaaggacatcgtggt
ttgcccggattagatggcggaaaaggagaaagtggcgcacctggtgagaagggagcaaca
ggcggtgtgggtccaatcggagcacctggatctattggacctgccggtacgcgaggtgaa
cgtggtagggaaggaccacctggccctcccggtgctagaggcttggatggaaatgcggga
acacctggacaaactggttctgttggtaagccaggcccacccggctttcctggagtacat
ggtgctaaaggtgatatgggtcatcaaggaccaaaaggcgaccaaggattgcaaggacca
cgaggtgaagctggaagacctggagatgttggcgaacccggagtagctggaccaccaggt
aaagatggatttcctggagaaaaaggttcaatgggtgcacctggcttggtcgggccacaa
ggatttccaggcgcaagaggctctgatggcatgcaaggtagtacaggggaacccggtata
aaaggagcacccggtcaacctggtgaaagaggatacaaaggagatgcgggcatcaaagga
gacgctggtcagccaggtccacgaggagttcctggcgcaaatggtccagaaggcaaacgt
ggtaaacgaggtatgagaggaccgacgggcccatctggcccaactggggaaagaggaaca
ccaggtctgccgggtatacctggtcccgatggtccaattggcccaaaaggaatacaagga
gatcgtggaattcaaggtccgactggtattaagggaagctcaggtgatgttggcccaacc
ggaactccgggacttcaaggtttacgtggtttgccaggaagagctggaattcaaggaaac
gctggaccacctggtgagcgtggtgtacctggtgccgacggtaagccaggtgaacaagga
ctgcaaggtctgcaaggcattccaggcccaatgggtattccaggagacaagggctttact
ggagaaccgggtaaaaatggtgaaccaggagttgcaggtcctcccgggccacgtggggat
aacggaaaagatggacttcctggtgcacaaggagctcccggaccacaaggacctgatggt
ataagaggagagcctggatctgttgggccaagaggatatcaaggattacctggtgctcca
ggtagcccaggagtttcaggaaaggatggtcaacctggaccacctggtccaatgggacca
atggggtcagcagggcttagaggtgaacgcggatttccaggagaacgaggaccagtggga
cagcctggaaccccgggtgaaagaggagaacctggcgtagcgggcccagatggagctccg
ggattcccaggcaagcctggtgctaaaggtcatatgggctccccaggaatgattggattg
ccaggtcttaaaggacatgcaggtccagctggagaaaaaggtgaacgtggaagtccagga
ccgtttggaccagaaggtccagctggcagaccaggtgatcgtggacctcaaggtaacgtt
ggtccacctggtgctcctggtgaatcaggtgaaagaggaacaccaggaaatcccggacca
ccaggtgagcaaggaaccagcggattgccaggtgaaagaggacctattggacctcagggc
tcaccgggctttcctggatcacccggagtagcaggattaccaggcgcaaaaggtgacaga
ggcttaatgggaataaaaggtgaacaaggaaacaccggtttacatggaacacctggagaa
caaggattgccgggtcctattggtttggttggacctaaaggagccagaggtgaaatcggc
ttaagaggtgaacctggcataagtggacttccaggtagaccaggagaaccaggagttgca
gggcaaccaggaaatcaaggaccacctggaataatgggtcttactggacataagggtaat
cctggcgaagcaggaagacctggattacatggcccacagggcttacaaggaccgcaaggg
ttggaagggccgaaaggagaggctggaagtgaaggtccggtgggaccccatggcagttca
ggaccaccaggtcaacctggagagcgaggtatacctggattaccaggtcccccaggagca
ataggaatgcaaggcttaagaggtagtgttggtgagccaggtcagcagggcaaaacaggc
aaagatggtgaagcgggtcctccaggtttacaaggccccttaggaccaccaggtcaacca
ggagaacaagggccagaaggtccatcaggtaaacaaggtcctccaggaatacaaggccga
atcggtgataagggtccaccaggacaaataggtaattctggtccccctggaaatccaggt
ttaccaggtccaccaggcccgatgggaccaatgggtttaattggcgagcgtggtgtgaaa
ggggaaattggcccaagcggtattgaaggaccgattggtccaagaggtaaagtgggtcct
cctggaccagaaggagtgaagggtgatgtaggagaacttggccctaaaggcataaagggt
catcgtggatttactggattgcaaggcttacaaggaaatcccggtataaaaggtgataat
ggtttgcctggtgtacctggtgctccaggaaaaccaggtgaaatcggtatgcgcggacca
caaggaagagacggcagttcaggactgcaaggtgcacctggagcaccaggacctcgcgga
ctttctggaactgatggaaaaacaggtcaaatgggtccagctggtccacctggtccacca
ggtccacctggtgaagctctcgggtatgatgccgctgctattgctgcgcttcttagtcaa
ggacaaacaaagggtgtagatactatgggtgatcaacctatggatattttcacagatgat
cttacaaatgaagagaaacatgcattagtaatgaaagcttttcaacatgttcaagcatca
ttcgaaagattgcgtagaccaaatgggcagaaaacagcaccggcgaagacatgtcgagac
ttatttgcagcttatcctgaatatgctacaggggagtattggatagatccaaatgagggt
gatatacgtgatgccattcttgtacaatgtgataggacaacaagaggcacttgtattatt
ccacagccgaaagaaactgcagctataagttatgcaggcagagaaaaagaagcatggctc
agtgaaatgcctacgggaatgaaaataacatataaaactgactcaatgcaattaggtttc
ttacaacttttgtctgccaaagctacgcaaacgatcattttccactgcaagaatacaatt
gccttcaaggatgacagtgataattcgtatagccgaggtctgaagttgctttcttggaat
gatgccgaactcactccgaatgggccacaacgattgcgctatgaaactgaatcagatgaa
tgcaggcaccgtttaaataaatgggcaaagactgttattacatacaaaacagaaaagtca
cagaggctgccaatcgttgatattgcggtaagagatttaggagatgcaaatcaacagttc
cgcattgagcttggtccagtgtgttttcacaactga
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integrated database retrieval system
