Teleopsis dalmanni (Malaysian stalk-eyed fly): 119670613
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Entry
119670613 CDS
T09311
Name
(RefSeq) 3'-5' RNA helicase YTHDC2-like
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tda03041
]
119670613
Enzymes [BR:
tda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119670613
Spliceosome [BR:
tda03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119670613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HA2_C
OB_NTP_bind
R3H
Ank_2
Ank_5
AAA_22
AAA_19
nSTAND3
Ank
Ank_3
ResIII
Myosin_head
HA2_N
PhoH
T2SSE
ATPase
NRho
AAA_30
AAA_25
TsaE
AAA_29
Motif
Other DBs
NCBI-GeneID:
119670613
NCBI-ProteinID:
XP_037936872
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All DBs
Position
1:complement(182733768..182738476)
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AA seq
1110 aa
AA seq
DB search
MPKRDLNRYKNNSNNEDIPRKYNKFSKSGMNNNRNSNKERQNLPDAERLPLEQLVSAFIQ
SNEGEIALPGLSNIERKYLHRYASALRLTTKSYGSKNSRVLYLTKQKTAMIGIKKKLELA
AGTKTLLANVLPSLKEETRKLHSLNETSANVPLNSRYRGDALYLHLGQRLVPPRSNRIKS
DMYREKQELPIYQYQDEIYRLLQTNSVIIISGDTGSGKTTQVPQYILIDAYQRKRPCRVI
VTQPRRVAAVSVAHRVAEERGEQVGETVGYQIRMECRMRKTSNLIYTTSGCFLRTLMADA
NEIFRKTTHLIIDEVHERDKFTDFTLISVKEHLKRNKNLKLILMSATMDIVLLSRYFDNC
PILRVPGQSFNVQIYYLEDILYHSGYRTALMEKYLRSMAEIEQQQLEMQQQNFEPAELYG
HLSSPLEEPPQFVDNIIDQCCDVSKTTEELITLFDQLKFSISSEGLYVDTPHSETGITPL
MAACKCNFPEYVEFFVKNQANVLLQDSQGYTAVEYAANFSDRACTEILERTEFCLQQQLQ
FTDEDVEKTQLLTAYQKQSNYDNEVDHDLILSLLEGLYRGTHPGAILVFLPGYNDIVQQR
DLINSTLPPGTYKLCILHGQMDSQDQIEALQRHNQRKIILSTNIGQTSITIPDLVYIIDS
GKIKMKTYDSITESSQLQSVWISKADANQRSGRAGRTQNGICYRLYSKAKYEFMPQFCIP
EFMRIPLAEICLYAKTFDKNTDCQTYLQRALNPPSKVCIQNAVKKLQILQVFNDDESVTD
LGKQLVEIPLDVQLGICLLYGVFFKCFDPVLTIVAYHSVKDPFLLPTDRSAQGQASYQRK
LFSAQSFSDQLGVLELYKAYSTVRNNKKRCFDFCSKNSLSYSAMEMFCATRRQISDLMVQ
KYRLGHNATLFNDDWEMVKCCLAAGLYPNIAVLDRYKNELSSSVEKKLIVQRTSALNPPG
QKNLKDFIHQLPHDWIIFYEKSRVGKLCSINMNTVISPVVVALHCGRYCNINDYGGENSD
KSDDEADFEVLSKEVRDLALTDDQQTVSFILDNWIHFEMNSKDAKSLKTLRSAIKTEFIT
FLRRGFIESSTTAVFWLQKLLHTLDQFTIS
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaagagacctaaacagatataaaaataatagcaataacgaagatatacccaga
aaatataataagttctcaaaaagtggaatgaataataatcgaaattcaaataaagaaagg
cagaatttgcctgatgcggaacgcctcccattagagcaattagtttctgcattcatacag
agtaatgaaggagaaatcgcattgccaggtttgtcaaacatagaacgcaagtatttgcat
cgttacgccagcgcattgcggctgacaactaagagttatggtagcaagaatagccgtgta
ctttacttaacaaagcaaaaaaccgcaatgattggtattaaaaagaaattggaactggcc
gcaggaactaaaacattacttgccaatgtattgcccagtttgaaagaagaaacacgcaaa
ttgcattccctaaatgagacatcagcaaatgttcctttgaacagtcgctatcgtggtgat
gcactgtacttgcatttgggtcaacgtttagtgccaccacgttctaatcgtattaaaagt
gatatgtatcgcgaaaaacaagagctgcccatatatcaatatcaagatgagatctaccgt
ttgctgcaaactaattccgttatcataattagtggcgataccggctctggtaagactaca
caagttccgcagtatatattaattgacgcatatcaacgtaaacgtccatgtcgtgtgata
gtcacacagccgcgtagagtagctgcagtgtcggtggcacatcgtgtcgcagaggagcgc
ggagaacaagttggtgaaactgtaggctatcaaatacgcatggaatgtcgtatgcgtaaa
acatcaaatttaatttatactacaagtggttgttttcttcgcacgctaatggcagatgca
aatgaaatttttcgtaaaaccactcatctcattattgacgaagtacatgaacgtgacaaa
ttcactgattttacgttaatttcggtgaaggagcatttaaaacgtaacaaaaatttaaag
ttgatattaatgtcagcaacaatggatatagttttgctatcgcgttattttgataattgt
cctatattaagagtaccaggacagagttttaatgtgcaaatctattatttagaagatata
ctttatcattctggttatcgcacagcattgatggagaaatatctacgttcaatggcagaa
atagaacaacaacaacttgaaatgcaacaacaaaatttcgaaccagctgaattgtatggt
catttatcttctccactggaagaaccaccacaatttgttgataatataatagatcaatgt
tgtgatgttagtaaaaccaccgaggaattaataacactttttgatcagttgaaatttagt
atttcaagtgagggtttatatgtcgatacgccacattcagaaacaggaataacaccttta
atggctgcttgcaagtgtaatttccctgaatacgtagaattttttgttaaaaatcaagca
aatgtactcttgcaagattcacaaggttatacggctgttgagtatgcagcaaatttttct
gatcgggcatgtacggaaattctagagagaactgaattttgtttgcaacaacaattacag
ttcactgatgaagatgttgagaaaacacaactactcacagcatatcaaaagcagagtaat
tacgataatgaagtcgatcatgatttaatattatctttgctggaaggtttatatcgaggc
actcatccaggtgccattctggtattcttgcctggttataatgatatcgtacaacaacgt
gatctcataaatagtacattaccacctggtacatataagttatgtatactgcatggacaa
atggattctcaagatcaaatagaggcattacaacgtcataaccaaagaaaaattatactt
tccacaaatattggccaaacatcgatcactatacctgatctggtatacattatcgattca
ggcaaaattaaaatgaaaacttatgattctataactgaatcttcacaattacaatctgta
tggatctcaaaagcagatgctaatcaacgttctggtcgcgctggtcgtacacaaaacggc
atctgctaccgtttgtattcaaaagctaaatatgaatttatgccacaattttgcatacca
gaatttatgcgtataccattggcggaaatttgtctctacgcaaaaacttttgataagaat
actgattgtcagacatatttacaacgtgcactgaatccgccatcgaaagtttgtatacaa
aatgctgtgaaaaaactgcaaatcttacaagtattcaacgatgatgaaagtgtgacggat
ttgggcaagcaacttgttgagataccacttgatgtgcaactcggcatatgcttactctat
ggtgttttctttaaatgttttgatccagtattaacaattgtagcatatcactctgtgaag
gatccttttctactaccaacagatcgctctgcgcaaggacaagcttcatatcaacgtaaa
ctgttttcagcacaaagctttagtgatcaacttggtgtgttggagttgtacaaggcatat
tctaccgttcgaaacaataaaaaacgttgtttcgatttttgcagtaaaaactctttatct
tattcggcaatggaaatgttctgcgctacacgacgccaaatatccgatctaatggtgcaa
aagtatcgtctaggacataatgcaacattatttaatgatgattgggaaatggtaaaatgt
tgcttagctgctgggctatatcctaatattgccgtattagatcgttataaaaatgaactt
tcatctagtgtagaaaagaagcttatagtacagcgaacctcagctttgaatccaccagga
caaaagaatctaaaagattttatacatcaattgccgcatgattggattatcttttatgaa
aagtcacgtgtgggcaagttgtgctctattaacatgaacactgttatctcacctgttgtc
gtagcactacactgtggcagatattgcaatataaacgattatggcggcgagaattccgat
aaatctgatgatgaagcagatttcgaagttttatcaaaggaagttcgtgatcttgcttta
acagatgatcagcagacagttagttttatcttggataattggatacactttgagatgaat
agcaaagatgcgaagagtttaaaaactttgcgctcagctattaagacagaatttataact
ttcctacgacgcggttttatagaatcatcaacgactgctgttttttggttacaaaaattg
ctacataccttggatcagtttactatatcataa
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