Teleopsis dalmanni (Malaysian stalk-eyed fly): 119670614
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Entry
119670614 CDS
T09311
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119670614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tda03041
]
119670614
Spliceosome [BR:
tda03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
119670614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
NBCH_WD40
PRP4
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_Aladin
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_SPT8
Beta-prop_WDR19_1st
WD40_like
WD_LRWD1
Nha1_C
Motif
Other DBs
NCBI-GeneID:
119670614
NCBI-ProteinID:
XP_037936873
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Position
1:complement(9238255..9240326)
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AA seq
527 aa
AA seq
DB search
MSDDEDVQYVKRPRTIHYGSLEEAERKRQSAAQLEDIDSDEDYEDQKKPAAAAAAAPVAA
PPPTAGVLAKKIDEEYYDLETEVAKDKVALLEEFERKRRARQINVSTDDVEIKRNLRHLN
EPICYFGEGPAERRRRLKELLANLGENAIKQKQTEEEERKQLQREQESTWYHEGPETLRV
ARLWIADYSLPRAKVRLERAREALDVPSATRAGQMVELQKRLQSLVPQCSQVGDNRPVSA
AAFSDDSKLLLTSSWSGLCKLWSVPNCELLQTLRGHASYVGGVAFRPNVRQSDKNIVAMA
SGGHDGAVKLWGFDSEESIADITGHMPHRVSKLAFHPSGRFLATACYDSSWRLWDLEQKT
EVLHQEGHAKAVHCLSFQQDGSVIVTGGLDAFGRVWDLRTGRCIMFLEGHLGSIFGVDFS
PNGFHIATGSQDNSCKIWDLRRRQPVYTIPAHVNLISDVKYQRESGSFLVTSSYDCTTKI
WSNKTWQPLKTLQGHDGKVVAVDIAPDSQHIVTTSFDRTFKLWAPES
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgatgaagatgtacaatacgtaaaacgaccgcgtacaattcattacggctca
ttggaagaagctgaacgtaagcgacagtcggcggcacaattggaggatatagattcagat
gaagattatgaagatcaaaaaaagccagcagctgcagctgcagctgcacctgtggcggca
cctccaccaacggctggtgtattggcgaaaaaaatcgatgaggaatattacgatttagaa
accgaagttgctaaggataaagttgcactacttgaagagtttgagagaaaacgacgtgca
agacaaattaatgtgtcaactgatgatgttgagattaaacgtaatttacgacatttaaat
gaaccgatttgctatttcggcgaaggaccagcggaaagaaggcgtcgtctgaaagaatta
ttagcaaacttaggtgaaaatgctataaagcaaaagcaaacagaagaggaggaacgtaaa
cagttgcaaagagaacaagaaagtacatggtatcatgaaggcccagagacgttgcgagta
gccagactttggattgctgattattcactgccgcgcgctaaggtgcgtttagagcgtgca
cgtgaagcacttgatgtgccaagtgctacacgtgctggacaaatggtagagttgcaaaag
cgtttacagtcattagttccacaatgtagtcaagtaggtgataaccgtccagttagtgca
gcagcatttagtgatgattccaaattattgttaacttcttcatggtcaggactttgtaag
ttgtggtcagtaccaaattgtgagttgctacagacattacgcggacatgcctcctatgta
ggtggtgttgcttttcggccgaatgtacgccaaagtgataaaaatattgtcgctatggca
tcaggagggcatgatggtgcagtgaaattatggggctttgattctgaggaatcaatagct
gatataactggccatatgccccatagagtatctaaattggcgtttcatccatctggacga
tttttggcaacagcatgttatgattcttcatggcgtttatgggatttggaacaaaagact
gaagttttgcatcaagaaggacatgctaaagcggtgcattgccttagttttcaacaagat
ggtagtgttatagtaacaggaggtctagatgcttttggacgtgtttgggatttacgaact
ggacgctgtatcatgtttttggaaggacatttagggtctattttcggtgttgatttttca
ccaaatgggtttcatatagccactggctcacaggataattcatgtaaaatatgggattta
agaagacgacaaccagtatacactatacctgcacacgttaatcttatttctgatgttaaa
tatcaacgtgagagtggtagtttcctcgtaacctcctcctatgattgcactacaaagata
tggtcaaataaaacgtggcaaccattgaagacactgcagggacatgatggcaaagtagtt
gctgtagatattgcacccgattctcagcatatagtcactacttcatttgatcgtacattc
aaattatgggcgcccgaaagttga
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