Teleopsis dalmanni (Malaysian stalk-eyed fly): 119670720
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Entry
119670720 CDS
T09311
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119670720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tda03019
]
119670720
Messenger RNA biogenesis [BR:
tda03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119670720
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
119670720
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GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Rrp40_N
Motif
Other DBs
NCBI-GeneID:
119670720
NCBI-ProteinID:
XP_037937038
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All DBs
Position
1:174594879..174595969
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AA seq
208 aa
AA seq
DB search
MAASNKNTQGALICLPGQRLCLSSETTVAGPGTFERQGYIYSTLAGIVKTKEKDNSTYIE
VECAGKPLLVPVGGDLVTARVTLVNQRFARCSLLSVANHILDQPYRAILRKEDVRATEKD
RVDMVKCYKPGDIILARVLPLTDLTCYQISTAENELGVVSAISDECRPYGELMVPYSWTE
MQCPRTLIREPRKVAKVLSERFVKSEQD
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaagcaataaaaatacgcaaggtgctcttatatgtttaccaggccaaaggttg
tgtttatcaagcgaaactacagtagcaggaccaggaacttttgaaaggcaaggatacata
tattccacattagcgggaattgtcaaaacaaaagaaaaagataattcaacatatattgaa
gttgaatgtgcaggaaaacctcttcttgttcctgttggaggagatttagtaaccgctaga
gttacattagtcaatcaacgatttgcaagatgttcgctactctctgtagctaatcatatc
cttgatcaaccttatcgtgcaattttacggaaagaggatgttagagcaacagaaaaggat
cgtgttgatatggttaagtgctataaaccgggtgatataatattagctcgtgtattgccg
ctaactgatctaacatgttatcaaataagtaccgcagaaaatgaacttggtgtagtatct
gcaatatcagacgaatgcagaccatatggggagttaatggttccttatagttggactgaa
atgcaatgtccaagaacgttaattagggaaccaagaaaggttgcaaaagttttgtctgaa
agattcgttaaatcggagcaagattag
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