Teleopsis dalmanni (Malaysian stalk-eyed fly): 119671088
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Entry
119671088 CDS
T09311
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03020
RNA polymerase
tda03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119671088
09124 Replication and repair
03420 Nucleotide excision repair
119671088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tda03021
]
119671088
03400 DNA repair and recombination proteins [BR:
tda03400
]
119671088
Enzymes [BR:
tda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119671088
Transcription machinery [BR:
tda03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
119671088
DNA repair and recombination proteins [BR:
tda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
119671088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
119671088
NCBI-ProteinID:
XP_037937522
LinkDB
All DBs
Position
1:195784698..195791283
Genome browser
AA seq
1881 aa
AA seq
DB search
MSTNDSKAPLRQVKRVQFGILSPDEIRRMSVTETGVQFAETMEGGRPKLGGLMDPRQGVI
DRTSRCQTCAGNMTECPGHFGHIDLAKPVFHIGFITKTIKILRCVCFYCSKLLVSPHNPK
IKEIVMKSKGQPRKRLSHVYDLCKGKTICEGGEDMDMTKDGQPNDPNKKQGHGGCGHYQP
SIRRTGLELSAEWKHVNEDSQEKKILVTAERVWEILKHITDEECFILGMDPKFARPDWMI
VTVLPVPPLAVRPAVVMFGAAKNQDDLTHKLADIIKSNNELKKNESSGAAAHVIQENIKM
LQFHVATLVDNDMPGMPRAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVITP
DPNLRIDQVGVPRSIAQNLTFPELVTPFNIDRMQELVRRGNSQYPGAKYIVRDNGERIDL
RFHPKPSDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCT
SPYNADFDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKMT
KRDVFITREQMMNLLMFLPTWDGKMPQPCILKPRPLWTGKQIFSLIIPGNVNMIRTHSTH
PDEEDDGPYKWISPGDTKVMVEHGELIMGILCKKTLGTSAGSLLHIVFLELGHEIAGRFY
GNIQTVINNWLLLEGHSIGIGDTIADPQTYNEIQMAIKKAKDDVINVIQKAHNMELEPTP
GNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACVG
QQNVEGKRIPYGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLID
TAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSVGQLIQLRYGEDGLCGETVEFQNLPTV
KLSNKSFEKRFKFDWSNERYMRKVFTDEVIKELSESGSALPELEIEWEQLCRDREALREI
FPNGDSKVVLPCNLQRMIWNVQKIFHINKRMPTDLSPLRVISGVRDLLQRCVIVVGNDRL
SKQANENATLLFRCLVRSTLCTKYVAEEFRLSTEAFEWLIGEIETRFQQAQANPGEMVGA
LAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGGAAR
DAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQRTVISEDQEFVNVYYEMPDFDPTRISP
WLLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNADKLVLRIRIMNNEENKF
QDEDEAVDKMEDDMFLRCIEANMLSDMTLQGIEAIGKVYMHLPQTDSKKRIIITETGEFK
AIGEWLLETDGTSMMKVLSERDVDPVRTSSNDICEIFTVLGIEAVRKSVEKEMNAVLQFY
GLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLMDASAHAETD
PMRGVSENIIMGQLPKMGTGCFDLLLDAEKCRYGIEIPSTLGPNMLAGSAMFFGAGATPS
MTPPQTPWINCSTPRYFSPTGQLGMTPGGPSFSPSTSEVSGMSPSWSPNHPGSSPNSPGM
SPCFTQSPSPSPLYSPTSPNYIVSSPVAASPNYSPSSPTYSPSSPMYVSSPRYSSNTPNY
NSGSTGYSPAGINYLSASPGYSPSSNFTSSSPSFSGGTMRFSPNSAYSPTSSNYSPNSPS
YSPNSPSYSPSSPSYSPNSPSYSPNSPSYSPSSPTYTPVTPTYSPSSPSFSKSNYSPGSG
VYSPTGGNYSPSSPTYSPPSPSYDGSPGSPRYTPVSTKYSPSSPVFSPTSPVYSPSSPQH
TPHQYSPTGSSYSGTSQNYSAYSPSSPKYSPTSPTSPTYSPNARNYSPTSPIYSPTSLSQ
GYSPTSPAYSPSSPPYDESDS
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atgagtactaacgattccaaggcgcctttgcgccaggtgaagcgagtacagtttggcata
ttatctcctgatgaaattcggcgtatgtcagtaaccgaaacgggggtacagtttgctgaa
acaatggagggtggaaggcctaaattgggtggattgatggatccacggcaaggcgttatt
gatcgtacgtctcgatgtcagacttgtgctggaaacatgacggagtgtccagggcacttt
ggacatatagacttagcaaaaccagttttccatattggtttcataacaaaaacaattaaa
atacttagatgtgtgtgtttctactgctcaaaactactggtttccccacataatccaaag
ataaaggaaattgtaatgaaatcaaaaggacaaccacgcaaacgtttaagtcatgtctat
gatttgtgcaaaggtaaaactatttgcgaaggtggtgaggatatggatatgacgaaggat
gggcaacctaatgatcctaataagaaacagggccatggtggttgcggtcattaccaacct
tcaataaggcgtacaggtttagaattgagtgctgaatggaaacatgttaatgaggattca
caggaaaagaaaatacttgtaactgcagaaagagtatgggaaattcttaaacacataaca
gatgaggaatgctttatattgggtatggatcctaagtttgcacgtcctgattggatgatt
gtgaccgtgttgccagtaccaccactagctgtacgaccagctgttgtaatgtttggggca
gctaagaatcaggacgatttaactcacaaattggctgatattataaaatcaaacaatgaa
ttgaaaaagaatgaatcttctggtgcagcagcacacgtcatacaagaaaacattaaaatg
ctacaatttcatgtagctacacttgttgataatgatatgcctggtatgccacgtgcaatg
caaaaatctggtaaaccattaaaagcgataaaggcgcgcttaaagggcaaagaagggcgt
attcgtggtaatttgatgggtaaacgtgttgatttttctgcacgtactgttattacacca
gatcccaacctacgtattgatcaagttggtgtgcctcgttcaattgcacaaaacttgact
tttccggagttagtaacgccctttaatattgatcgtatgcaagagcttgttcgtcgcggt
aattcacaatatcctggagcaaaatacatagtccgtgataatggcgaacgtatagattta
agatttcatccaaaaccatcagatttacatttacaatgtggttacaaagtagaacgtcat
ttacgtgatgatgatttggtaattttcaatcggcaacctacgcttcacaaaatgagtatg
atggggcatcgcgttaaagtgttgccgtggtctacatttcgtatgaatttatcctgtact
tccccatataacgctgattttgacggtgatgaaatgaacttgcatgtaccacaatctatg
gaaacacgtgccgaagtggaaaacatacatatcactccacgtcaaatcattacaccacag
gcaaataaacctgttatgggtattgtgcaagatactttaacagctgttcgaaaaatgaca
aaacgtgatgttttcataacacgtgagcaaatgatgaacttgctaatgttcttgcccact
tgggatggaaagatgccacaaccttgtatattaaaaccacgtccgttatggacaggaaaa
caaatattttcattgattatacctggaaatgtgaatatgatacgcacacattccacacat
cctgatgaagaggatgatggtccatataaatggatttcaccaggtgacacaaaagtaatg
gtagaacatggtgaacttattatgggcatattgtgcaagaaaacattgggtacttcggct
ggttctctacttcatattgtattcttggaattgggtcatgagatcgcaggtcgcttttat
ggtaacattcagactgtaataaacaattggttactgttagaaggtcacagtatcggtatt
ggtgatacaattgctgatcctcagacctataatgaaattcagatggcaatcaaaaaagcc
aaagatgatgtcataaatgtcattcaaaaggcacataacatggagttggaacccacaccc
ggtaacacattgaggcagacattcgaaaatcaagtaaatcgtattctaaatgatgctcgt
gacaaaactggtggttcagctaagaaatctttaactgaatataataatctaaaggctatg
gtggtctcaggttctaagggttcaaatattaacatttctcaagttattgcttgcgtgggt
cagcaaaacgtagaaggtaaacgtattccgtacggttttcgcaagcgcactttgccacat
ttcattaaagacgattacggtcctgaatctagagggtttgtagaaaattcatatcttgcc
ggtctgacaccatccgaattttactttcacgctatgggtggtcgtgaaggtcttatcgat
acagctgtaaaaactgctgaaactggttacattcagcgtcgtttgataaaggctatggag
tctgttatggttaattatgatggcactgttagaaattctgttggccaattgattcagtta
cgttatggtgaagacggtctttgtggtgaaacagtggaatttcaaaatttaccaacagta
aaactgtcaaataaatcctttgaaaagcgatttaaatttgattggtccaatgagcggtac
atgcgtaaagttttcactgatgaagttattaaagaattaagtgaaagtggatccgcatta
ccggagttagaaattgagtgggaacaattgtgtcgagatcgcgaagcattacgtgaaatt
tttcccaacggcgattccaaggttgtattgccttgcaatttgcaaagaatgatttggaat
gtacaaaagattttccacataaataaacgtatgcctactgatttgtctcctctgcgtgtg
attagcggtgtacgcgatttgttacaacgctgcgtcattgtagttggcaatgatcgcttg
tcgaaacaagcaaacgaaaacgctactttgctcttccgttgcttggtacgttcaacgctt
tgtaccaaatatgtagctgaagagtttcgattgtccacagaggctttcgagtggttaatt
ggtgaaatcgagacaagattccaacaggctcaagctaatccaggcgaaatggtgggtgct
ttagctgcccaaagtttgggtgaacctgccacacagatgacattgaatactttccatttt
gctggtgtatcttcgaaaaacgtaactttgggtgtaccgcgtctcaaagaaattattaat
atttcgaagaagccaaaggctccttcacttactgtttttctaactggtggtgcagctcgt
gatgccgaaaaggctaaaaacgttttgtgtcgtttagaacatacaactttaagaaaagtt
actgctaacacagctatttattatgatccagatccccaacgtacagttatatcggaggat
caagaatttgtgaatgtttattatgaaatgcctgattttgatccaacccgcatttcacct
tggctactgcgtattgagttggatcgtaaacgtatgacagataaaaaattaactatggaa
caaattgctgaaaaaataaatgcaggattcggtgatgatctaaattgtatatttaacgat
gacaatgctgacaagcttgtgttgcgtatacgtattatgaacaatgaagagaataaattt
caagatgaggatgaggctgtcgataagatggaagatgacatgtttctgcgttgcattgaa
gcaaatatgttgtctgatatgacattacaaggcattgaagcgattggaaaagtatacatg
catttgccacaaacagacagcaaaaaacgtattattataactgaaacgggagaatttaaa
gctattggagaatggctattggaaactgatggtacatcaatgatgaaagtattgtcggaa
cgagatgttgacccagtacgaacctcgtcgaatgatatttgtgaaattttcacagtattg
ggtattgaagctgtacgtaaatctgttgagaaagagatgaacgctgtattgcagttctat
ggtctttacgtgaactatcgtcatttggccttgttgtgtgacgtaatgacagcaaaaggt
cacttgatggccattacacgtcacggtataaatcgtcaagatactggtgctttaatgaga
tgttcttttgaggaaactgttgatgtgttgatggatgcttctgcacatgcagaaactgat
cctatgagaggagtgtcggaaaatataattatgggacaattacctaaaatgggaactggt
tgctttgatctattattggatgcagaaaaatgtcgttacggtattgaaataccaagtact
ttaggtccaaatatgcttgcaggttctgcaatgttctttggtgcgggtgcaacgcctagt
atgacaccgccacagacaccatggataaattgcagtacaccacgttatttctcaccaact
ggacaactgggtatgacacctggtggtcctagtttttcaccatcaacatctgaagtatct
ggcatgtcaccaagttggtcaccaaaccatcccggatcgtctccgaattctccagggatg
tctccatgctttactcaatctccaagtccgtcaccattatattcgcctaccagtccgaat
tatatagtttcatcccctgttgcggcgtcacctaattattcaccatctagtcctacatac
tcaccctcttcacctatgtacgtgtctagtccgcgttattcgtcaaatacacccaattac
aactcaggttcaactgggtattctccggccggtataaattatttgtccgcatcgcctggt
tattcaccatcttcaaactttacatcatcaagtccatcattttctggtggtacaatgcgg
ttttcaccaaatagcgcttactctccaacatcttctaattattctccaaactcaccctct
tattctcccaattcaccatcgtactcaccctcaagcccttcctactcacccaattcacca
agttattcaccgaattcaccatcatattcaccgtcatcgccaacgtatacaccggttaca
ccgacctattctccaagttccccaagcttttcaaaatcaaattattctcctggttcgggc
gtatattcaccaacgggtggaaattattcgccatcttctccaacctattcgccgccatca
ccatcgtatgatggctcaccaggttctccacgctatacaccagtctcaacaaaatattct
ccatcatcgccagtcttttcgccaacatcgccggtgtattctccaagttctccgcagcat
acaccacatcaatacagccctacaggctctagttattccggtacaagtcaaaattactca
gcttattccccgagcagtcctaaatattctccaacatctccaacgtcaccgacatattca
ccgaacgcacgtaactattctccaacttcacccatatattcacctacgtcgctctcgcaa
ggttatagtccaaccagtccagcctattcccccagtagcccaccatatgatgagagtgac
agctaa
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