KEGG   Teleopsis dalmanni (Malaysian stalk-eyed fly): 119672341
Entry
119672341         CDS       T09311                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
tda  Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03030  DNA replication
tda03410  Base excision repair
tda03420  Nucleotide excision repair
tda03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tda00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    119672341
   03410 Base excision repair
    119672341
   03420 Nucleotide excision repair
    119672341
   03430 Mismatch repair
    119672341
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tda03032]
    119672341
   03036 Chromosome and associated proteins [BR:tda03036]
    119672341
   03400 DNA repair and recombination proteins [BR:tda03400]
    119672341
DNA replication proteins [BR:tda03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    119672341
  DNA Replication Termination Factors
   ELG1-RFC complex
    119672341
Chromosome and associated proteins [BR:tda03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    119672341
DNA repair and recombination proteins [BR:tda03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     119672341
  Check point factors
   HRAD17(Rad24)-RFC complex
    119672341
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 Rad17 AAA_lid_RFC1 AAA_16 Mg_chelatase Viral_helicase1 nSTAND_NTPase5 nSTAND3 AAA_19 RCF1-5-like_lid AAA_18 MeaB AAA_5 RuvB_N ABC_tran AAA_11 AAA_assoc_2 RNA_helicase NTPase_1 AAA_23 DEAD AAA_2 AAA_28 DNAX_ATPase_lid AAA_24 AAA_30 AAA_7 AAA_29 MCM SRP54 AAA_3 bpMoxR AMP-binding_C_3 KTI12 AAA_33 IstB_IS21 ATPase_2 DUF815 FtsK_SpoIIIE ATP_bind_1 CbiA AAA_25 SecA_DEAD
Other DBs
NCBI-GeneID: 119672341
NCBI-ProteinID: XP_037939291
LinkDB
Position
1:54433774..54435481
AA seq 330 aa
MTQNLTAEEIKKRNLPWIEKYRPTKFDEIVGNDETVARLSVFATQGNAPNIIIAGPPGVG
KTTTIQCLARILLGDSYKEAVLELNASNERGIDVVRNKIKMFAQQKVTLPRGRHKIVILD
EADSMTEGAQQALRRTMEIYSNTTRFALACNTSEKIIEPIQSRCAMLRFSKLSDPQLLAK
LIEVCQLENLTYDEEGLEAIVFTAQGDMRQGLNNLQSTAQGFGTITAANVFKVCDEPHPM
LIQDMLQHCANNDIHKAYKILAKLWRLGYAAEDIIGNIFRVCKRLNINEHMKLNFIREIG
ITHMKVVDGLNSLLQLTGLLAKLCEIADTN
NT seq 993 nt   +upstreamnt  +downstreamnt
atgacacaaaatttaactgcagaagaaataaaaaaaagaaatttgccgtggatagaaaag
tatcggccaacaaaattcgatgaaatcgtaggaaatgatgaaacagtagcgcgcttgtca
gtttttgctacacaaggaaatgctccaaacataattatagcgggcccacctggtgttggt
aaaacaactacaatacagtgtctggcgcgtatcttacttggagacagctataaggaagct
gtgttggagttaaatgcctcgaatgaacgtggtatcgatgtggttcgaaataagatcaaa
atgtttgcacaacagaaagtaacgcttcctcgtggcaggcataaaattgttattttggat
gaagcagacagtatgacagaaggtgcacaacaggcattaagacgcacgatggaaatctat
agcaacacaacacgttttgcattagcctgtaatactagcgaaaaaataatcgaacctata
cagtcacgttgtgctatgttacgattttccaaactatcagatccacagttattagcaaaa
ttgattgaagtgtgtcagctagaaaatttgacttatgatgaagaaggcttggaagcaatt
gtgtttactgcacaaggcgatatgcgacagggtttaaataatctacaatcgacagcgcaa
ggatttggtacgattacagctgcaaatgtatttaaagtgtgtgatgagccacatcccatg
ttgatacaggatatgttgcaacactgcgctaacaatgatatacacaaggcatataaaata
ttagcaaaactttggcgactgggctatgctgctgaggatatcattggcaacatattcaga
gtatgtaagcgattgaatataaacgagcatatgaaactgaattttataagagagattgga
atcactcacatgaaagtcgttgacggcttaaattcgttactacaattaaccggcctatta
gcgaaactctgcgagattgccgatacaaattag

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