| Entry |
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| Name |
(RefSeq) regulator of nonsense transcripts 1 homolog isoform X1
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| KO |
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| Organism |
tda Teleopsis dalmanni (Malaysian stalk-eyed fly)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:tda00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119672705
03015 mRNA surveillance pathway
119672705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:tda03019]
119672705
Enzymes [BR:tda01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
119672705
5.6.2.5 RNA 5'-3' helicase
119672705
Messenger RNA biogenesis [BR:tda03019]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
119672705
mRNA cycle factors
Common to processing body (P body) and stress granule
119672705
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1:complement(234304516..234309840)
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| AA seq |
1175 aa
MEAKNNKKKSATMSVDAAFGPSSQTLTFLDTEENDLIGADTQASDFDFRDFTLPSQSQIS
QQDPLPSVAGSSGHPFGRKIELPNKLSTITNGLAELQFEEEDEETSLTSVKELPPHACKY
CGIHDKETVVMCNNCKKWFCNGRGSTSGSHIINHLVRAKHREVTLHSDGPLGETVLECYS
CGVRNVFLLGFIPAKADSVVVLLCRQPCAAQNSLKDLNWEQDQWKPLISDRCFLSWLVKT
PSEQEQLRARQISAAQINKLEELWKENIDATFQDLEKPGIDTEPAQVLMRYEDGYQYEKI
LGPLVRLEADYDKKLKESQTQENIEVRWDIGLNKKNIAYFTLAKTDSDMKLMHGDELRLR
YVGEMHKAWSEVGHVIKVPDNYGDDIGLELKASPDAPVKCTSNFAVDFIWKSTSFTRMTR
ALKLFAMDRNSVSNFIYSRLLGHGRQDGNDEVLFRSQPPKLYTAPNLPDLNRSQVYAVKH
ALQRPLSLIQGPPGTGKTVTSATIVYQLVKQHGGPILVCAPSNTAVDQLTEKIHLTNLKA
VRVCAKSRESIDSPVSFLALHNQIRCMETNSELKKLQQLKDETGELSSADEKRYRSLKRG
AENQLLEAADVICCTCVGAGDARLARIKFSSILIDESMQSTEPECMVPVVLGAKQLILVG
DHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSL
QNGVCAEDRKLKIDFPWPQPDRPMFFLVTQGQEEIAGSGTSYLNRTEAANVEKITTRFLK
AGVRPEQIGIITPYEGQRAYLVQYMQYQGSLHSKLYQEIEIASVDAFQGREKDLIIMSCV
RSNERQGIGFLNDPRRLNVALTRSKYGTIIVGNPKVLSKQALWNHLLNFYKDRKVLVEGS
LNNLKESLIQFQKPKKIVNTLNMGAHFMNTIMANAKEVIVPGSVYDRTSNYGISSGPSNL
PGNSFGLGFNTGMGGGNFNSNQGMLMSQNYMTGPSYSGGRVPVGNATQNAVSNYQQWGNQ
HDSISYVSPERVRATLNNMPVPVGMFMNMGNMPRRFYNQQAVQAAVKQGRNGGGNGQTKT
NGSNGSTRNQQGGKGRPILANSFTSVISQASASPLTQNMSQHGGFALSQQPDLSQDFGQI
SQIDVLSQDISGAQLQSDRLSLGFNSQSQLTQPPY |
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| NT seq |
3528 nt +upstreamnt +downstreamnt
atggaagctaaaaataataaaaaaaagtccgccacgatgagtgtagatgcagcattcggt
ccaagttctcagactctgaccttccttgacactgaggaaaatgatttaattggtgcggat
acacaagcatctgattttgattttcgcgattttactttaccatctcagtctcaaatatct
caacaagatcctttaccaagtgtagcaggttctagcggccacccattcggtcgaaaaata
gaattgcccaataagttgagtacaattactaatggattggctgaattacagtttgaagaa
gaagatgaggaaacttctcttacatctgttaaggaattgccaccacatgcctgcaaatat
tgtggcatccacgacaaggaaacggtagtcatgtgcaataactgtaaaaagtggttttgt
aatggtcgaggcagtacatctggttcccatatcattaatcacttagtacgtgctaaacat
cgtgaagtcaccctgcactcagacgggccattaggcgaaacagtcttggagtgttattct
tgtggtgttcgtaatgtgtttctactaggatttataccagctaaagcagattctgtagtt
gttttactatgtcgacaaccatgtgctgcacaaaattcattgaaagatttaaattgggaa
caagatcaatggaaacctcttatatctgatcgttgttttttgtcatggctagttaaaaca
ccaagcgagcaagaacagttacgagcacgtcaaatatcagcagcacaaattaataagcta
gaagaattatggaaagaaaatattgatgccacctttcaagatttagagaagcctggaatt
gacactgaaccagcacaagtgttaatgcgttacgaagatggttatcagtacgaaaaaatt
ttaggaccgctcgtacgtctcgaagctgactacgataagaaacttaaagaatcccaaact
caggaaaatattgaagttcgttgggatattggtctaaataaaaaaaatattgcttacttt
acgttggcaaaaactgactctgatatgaaattaatgcatggtgatgagttgcgtttaaga
tatgttggagagatgcataaagcatggagcgaagttgggcatgttattaaagtgcctgat
aattatggcgatgatattggtttagaattgaaagcatcacccgatgctccagttaaatgc
acttcgaattttgccgtcgacttcatttggaaaagtacttcattcactcgtatgactcgt
gcattaaaattatttgcaatggatcgcaattctgtttctaactttatatactctcgttta
ttgggtcatggtcgtcaagatggcaatgatgaagttctatttcggtcacaaccacccaaa
ctttacactgctcctaatctccccgacctaaaccgttcgcaagtgtatgcagtgaaacat
gctttacaacgtccacttagtttaattcaaggaccgcctggcacaggaaaaactgttact
tctgctactatagtgtatcagttggttaaacaacatggtggacccatattggtttgtgct
cctagtaataccgcagtagatcagctaacagaaaagatacatttaactaatctgaaagca
gtacgtgtgtgtgctaaatcgagagaatctattgatagtccagtcagctttttagcttta
cataatcaaattcgttgcatggaaactaattctgagttgaaaaaattgcaacaattaaaa
gatgaaactggtgagcttagttcagctgatgaaaagcgttatcgtagcttaaaacgtgga
gctgaaaatcaattacttgaagctgccgatgtaatttgttgcacttgcgtaggagcaggt
gatgcgcgcttagcacgaattaagttctcgtctatacttattgatgagtctatgcaatca
acagaaccggaatgtatggtgccagttgtattaggtgcaaaacaattaatactagtcggt
gatcattgccaactaggaccagttgttatgtgtaaaaaagcggcacgtgctggtctatca
caaagtttgtttgaaagattggttgtgctgggtattagaccattccgtttagaagtacaa
tatcgtatgcatcctgagctttcacaatttccgtctaacttcttttatgagggttccttg
caaaatggtgtatgtgcagaagatcggaaacttaaaattgattttccttggcctcaaccg
gatagaccaatgtttttcctagttactcaaggtcaggaagaaattgctggttccggaact
tcttacttaaatcgcactgaagctgcaaatgttgaaaaaattacaacacgattccttaaa
gcaggtgttagaccagagcaaattggtattataacaccatatgaaggtcagagagcttac
ctagtacaatatatgcaataccaaggtagtttacattcaaaactctatcaagaaattgaa
atagccagtgtagacgcttttcaaggtagagaaaaagatttgattataatgtcgtgcgta
cgttccaatgaaagacaaggtattggtttcttaaatgatcctcgtcgtttgaatgttgct
ttaactcgttccaagtatggcacaattattgttggaaacccgaaagttttatcaaaacaa
gcattgtggaatcatttgttaaatttctacaaggatcgcaaagtacttgttgaaggttcc
ttgaacaatttgaaggagtctttaatacaatttcaaaaaccgaagaaaattgttaataca
cttaatatgggtgcacactttatgaatacaataatggcaaatgcaaaagaagttattgta
cctggatctgtatacgacagaactagcaattatggtattagtagtggtccaagtaattta
cctggcaatagttttggtttgggtttcaatactggtatgggtggtggaaactttaactca
aatcagggtatgttgatgtcacaaaattatatgacaggacctagctattcaggcggacgt
gttcctgttggcaacgccacacaaaatgctgtatccaattatcaacagtggggcaatcaa
catgattctattagttatgtttccccagaacgtgtgcgtgcaactttgaataatatgccc
gtacctgttggtatgtttatgaatatgggaaatatgcctcgtcgcttttataatcaacaa
gcggtgcaagctgctgtaaaacaaggacgaaacggtggtggtaatgggcagactaaaact
aatggttctaacggttctactaggaaccagcagggtggcaaaggacgtcccattttggcc
aatagttttacaagcgttatatcacaagctagtgcgtcaccacttactcaaaatatgtcc
cagcacggtggattcgccctatcgcaacaaccggatctttctcaagattttggacaaatt
tcccaaatagatgttttatctcaagatatatcaggagctcagctacagagtgatcgtcta
agtttgggctttaacagccaaagccaattgactcaaccgccttattga |
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