Teleopsis dalmanni (Malaysian stalk-eyed fly): 119673046
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Entry
119673046 CDS
T09311
Name
(RefSeq) exosome complex component RRP43-like isoform X1
KO
K12586
exosome complex component RRP43
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119673046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tda03019
]
119673046
Messenger RNA biogenesis [BR:
tda03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119673046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
HET-S
Motif
Other DBs
NCBI-GeneID:
119673046
NCBI-ProteinID:
XP_037940186
LinkDB
All DBs
Position
1:70372606..70374058
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AA seq
268 aa
AA seq
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MSDDYKLIYPIKSFKDALDDNVRYDGRKFNAYRPLTITTGSFTNAKGSSCVKIGNTNIAC
GVRAEFAKPNPGSPSKGYVVSNVDMSFLSTSAKPKLRMTSDMINSLIYNILVDQSVIKLE
QLCIQRKKLVWVLFIDIICLEIDGGLLSTAMIACIAALKDLKLPKVIYDTDTDKIEIGDD
FQKLSLGRSPTLSTYSIFEEKVLMDPSAEEEHIAHSQVAIGVVNDSIGLFIKSGGEPVHI
DQLNSCIVDAARRDVEVTSIINTVTNDT
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgattataagctgatttatcccattaaatctttcaaagatgccttagacgat
aacgttcggtacgatggtagaaagtttaatgcctacagacctttaactattacgacgggt
tcttttactaatgccaaaggttctagttgcgttaagattgggaatacaaacattgcttgt
ggtgttcgtgcagaatttgctaaaccgaatcctggatcaccaagcaaaggctatgttgtc
tcaaatgtggacatgtcatttttgtcgacttctgctaaaccaaaactgaggatgacatca
gatatgattaatagtttaatatacaacattcttgtagaccagtctgtaataaaactagaa
caattgtgtattcaacgaaaaaagctggtatgggttttatttatagatataatttgcttg
gaaattgatggtggattgctgtctactgcaatgatagcttgtattgctgcccttaaagat
ttaaaattaccaaaggttatatatgacacagatactgacaaaattgaaattggtgatgac
tttcaaaagctgtcattagggagatctcctacattaagcacatacagtatatttgaagaa
aaagttttaatggacccatcagccgaggaggaacacatcgcacactcacaggttgcaata
ggtgttgtcaatgattcaattgggttatttattaagagcggaggggaacctgtgcacatt
gatcaattaaatagttgcatcgttgatgcagcacgaagagatgtcgaagtaaccagtatt
atcaacaccgttacgaatgatacttaa
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