Teleopsis dalmanni (Malaysian stalk-eyed fly): 119673624
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Entry
119673624 CDS
T09311
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03022
Basal transcription factors
tda03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119673624
09124 Replication and repair
03420 Nucleotide excision repair
119673624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tda03021
]
119673624
03400 DNA repair and recombination proteins [BR:
tda03400
]
119673624
Enzymes [BR:
tda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
119673624
Transcription machinery [BR:
tda03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119673624
DNA repair and recombination proteins [BR:
tda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119673624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
SWI2_SNF2
TniB
Motif
Other DBs
NCBI-GeneID:
119673624
NCBI-ProteinID:
XP_037940776
LinkDB
All DBs
Position
1:75938184..75941316
Genome browser
AA seq
799 aa
AA seq
DB search
MGPPKKPKREKFGGDKTGKKRRPEDEAYSQMVDEPMDCSETDGIPGAATKNAETNDEGIM
TDEFGAKDYRSLMELKTDHTNRPIWVAPNGHVFLESFSPVYKHAHDFLIAIAEPICRPEH
IHEYKLTAYSLYAAVSVGLQTNDIIEYLKRLSKTTVPDGIVEFIKLCTLSYGKVKLVLKH
NKYFIESPHPEILQKLLKDPVIQQCRLKRDENEEFIQGTVDHKAITTFGTKLPANDNAAA
TVSDANDANAAAAANADPAGVVPDDITNYYDKIDNEDEDEDEASLNTVSFEVNQEKIEVI
QRRCIEIEHPLLAEYDFRNDTNNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVL
PCGAGKSLVGVTACCTVRKRALVLCNSGVSVEQWKQQFKMWSSADDSMICRFTSEAKDKP
MGCGILVTTYSMITHTQKRSWEAEQTMRWLQEQEWGIMVLDEVHTIPAKMFRRVLTIVQS
HCKLGLTATLLREDDKIADLNFLIGPKLYEANWLELQKKGFIARVQCAEVWCYMSPEFYR
EYLTTKTAKKMLLYVMNPSKFRACQFLIKYHEKRGDKTIVFSDNVFALKHYAIKMNKPFI
YGPTSQSERIQILQNFKFNQKVNTIFVSKVADTSFDLPEANVLIQISSHGGSRRQEAQRL
GRILRAKKGAIAEEYNAFFYTLVSQDTLEMGYSRKRQRFLVNQGYSYKVITRLEGMDADD
TLAYKTREEQAQLLQIVLSASDIDCEDEKMPGEPGARPGSSSVTKRSGGLSSMSGGDDAI
YYEQRRKTGNIHPLFKKFR
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgggaccgccaaaaaaaccaaaaagagaaaaattcgggggagataaaactggaaaaaaa
cgacgccctgaagatgaggcctacagtcaaatggtagatgaacctatggattgtagtgaa
actgatggtatacctggtgctgcgactaaaaatgcagaaactaatgatgaaggcattatg
actgatgagtttggagcaaaagattaccgctcattaatggaattgaaaacagatcataca
aatcgtccgatatgggtagcacctaatggccatgtgtttttagaatcattctcaccagtt
tataaacacgctcatgattttcttattgcaatagcagaaccaatttgtcgtcctgagcac
atacatgagtataaattaactgcgtacagtttatatgctgcagtttcagtaggtttgcaa
accaatgatataattgagtatttgaaacgtctaagtaaaaccacagtacctgacggtatt
gtggaatttataaaactttgtacactttcttatggaaaagtgaaattagttcttaagcac
aataaatactttattgagtcaccacatccagaaattttacaaaagttacttaaagatccc
gttattcaacaatgtcgtctaaagcgagatgaaaatgaagaatttatacaaggaactgtt
gatcataaagccattacaacatttggtaccaaattgcctgctaatgataacgcggctgca
accgtaagtgatgcgaatgatgcaaatgccgctgccgctgctaacgctgatcctgctggt
gtggtaccagatgatattaccaattattatgataaaattgataacgaggatgaagatgag
gatgaagcaagtctaaatactgtatcatttgaagtaaaccaagaaaaaattgaagtaatt
caaagacgttgcattgaaattgagcatcctttactagcagaatatgattttcgtaatgat
acaaacaatccagatattaatatagatttgaaaccaacagcagtcctacgtccttatcaa
gagaaaagtctacgtaaaatgttcggtaatggccgcgctcgttctggtgtaattgtctta
ccttgtggagcgggtaaatcgctggttggcgtgaccgcttgttgtactgtacgtaagcga
gcacttgttttgtgtaacagtggtgtatctgtggaacaatggaagcaacaatttaaaatg
tggtcatctgctgatgacagtatgatttgtcggtttacttccgaagccaaggataaacca
atgggttgtggtatacttgttacaacatattcaatgattacacatacacaaaaacgttcc
tgggaggctgaacaaactatgcgttggttacaggaacaggaatggggtataatggttcta
gatgaagtgcatacaattccagcaaagatgtttcgtcgcgttttgaccattgtgcagtcg
cattgtaaattagggttaactgcaacacttctacgtgaagatgataagattgctgatctt
aatttcctcattggtcccaaactttatgaagctaattggttagaattacagaagaaaggc
tttattgcaagagtgcagtgtgctgaggtttggtgttatatgtcacctgaattttatcgc
gaatatctaaccacaaaaactgctaagaaaatgttgctttatgtaatgaatccatcaaaa
ttcagagcatgtcagttccttattaagtatcacgaaaaaaggggagacaagactattgtg
ttttcagataatgtgtttgcattaaaacactatgcaataaaaatgaataaaccgtttatt
tacggcccaacttctcaaagtgaacgtatacaaattctccaaaattttaaatttaatcag
aaggtaaatacaatttttgtgtctaaggttgccgatacaagtttcgatttgcctgaagca
aatgttttaatccaaatttcttctcatggtggttcacgtcgtcaagaagctcagcgactt
ggtcgtattctacgtgctaaaaaaggagccatagcagaagaatataatgctttcttttat
acactcgtttcgcaagacacattggaaatgggttattctcgcaagcgtcaacgattttta
gttaatcaaggttacagttataaagtgataacacgtcttgaaggcatggacgcagacgat
acccttgcttataaaacacgtgaagagcaggctcaacttttacagatagttttatctgct
tccgacatagattgtgaggacgaaaaaatgccgggagaaccaggtgcacgtccaggaagc
agttctgtaactaagcgttcaggtggtttgagttctatgtcaggcggtgatgatgctatt
tactacgaacaaaggcgaaaaacaggaaatatacatcctttatttaaaaaattccgttag
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