Teleopsis dalmanni (Malaysian stalk-eyed fly): 119673805
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Entry
119673805 CDS
T09311
Name
(RefSeq) ATP-dependent RNA helicase DHX8-like isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119673805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tda03041
]
119673805
Enzymes [BR:
tda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119673805
Spliceosome [BR:
tda03041
]
Complex C
Other components
Step II factors
119673805
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
S1
WHD_HA2
DEAD
AAA_22
AAA_19
GIPC1_GH2
nSTAND3
PhoH
AAA_30
nSTAND_NTPase5
Cas3-like_C_2
AAA_16
Motif
Other DBs
NCBI-GeneID:
119673805
NCBI-ProteinID:
XP_037940792
LinkDB
All DBs
Position
2:complement(30117310..30121480)
Genome browser
AA seq
1219 aa
AA seq
DB search
MMDDLQKLEYFSLVSKICTELDNHLGLNDKDLAEFIIDMEEKNPTLNSFRDALCNFGAEF
SDSFIANLQRIIKLMRPKCNDNWHSGNDSFKSNKKNKLTLMFPGLALPNDKFSAHIKDGE
KKDDVANNATVDGSNDKTVVDDLMMELESLAPSVEVATKTKQRSNSPSMKNQKTGTDPIK
CNWKRLRSPNRRSNKHRSRERNERKRRSRSKSRDRTRRRSRSRSHERSRKYRSRSRSHER
RRDSKRERKATPTPMPDDPEPGNIYSGKVENIVPFGCFVQLFGLRKRWEGLVHISQLRSE
GRVTDVTEVVHRNQTVKVKVMSITGQKVSLSMKEVEQETGRDLNPLSHAPPPEQEHRDRN
PDRPFSSSTSLLNLKGGNMDNDENESRKRVTRISSPERWEIKQMISSGVLDRSELPDFDE
ETGLLPKEEDDEADIEIEIVEEEPPFLSGHGRALHDLSPVRIVKNPDGSLAQAAMMQSAL
SKERREQKMLQREQDMDALPASLNKNWIDPLPEEDSRTLAANMRGIGAAPMEVPEWKKHV
IGGKKSSFGKKTDMSLVEQRQSLPIYKLQDDLIKAVSDNQILIVIGETGSGKTTQITQYL
AECGFTARGKIGCTQPRRVAATSVAQRVAEEYGCHLGQEVGYTIRFEDCTSPETTIKYMT
EGMLLRECLLESDLKSYSVIMLDEAHERTIYTDVLFGLLKTAVQKRPKLKLIVTSATLDA
VKFSQYFFEAPIFTIPGRTFPVEVLYTKEPEVDYLDSSLITVMQIHLREPPGDILLFLTG
QEEIDTACEILYERMKSLGSDAPELIILPIYSALPSEMQTRIFDPAPAGSRKVVIATNIA
ETSLTIDGIFYVVDPGFVKQKVYNSKTGFDSLVVTPISQASAKQRAGRAGRTGPGKCYRL
YTERAYRDELLPSPIPEIQRTNLAYIVLQLKTMGINDLLNFDFMDAPPVESLVMALENLH
SLSALDNEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEVLTIVSMLSVQNVFYRPK
DKQALADQKKAKFNQAEGDHLTLLAVYNSWKNNKFSNAWCYENFVQIRTLKHSQDVRKQL
LGIMDRHKLDVVSAGKNSVRIQKAICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALF
NRQPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPSFFRFSDPTKLSKFKKNQRLEPLY
NKYEEPNGWRISRVRKRRN
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgatttgcaaaaactcgaatatttttcactggtgtcgaaaatttgcactgaa
ctggacaaccatttgggattaaatgataaggacttggcggagtttattatcgatatggaa
gaaaaaaatccaactttaaatagttttcgggatgcattatgcaactttggtgcagagttt
tcagattcttttatagcaaatttacaacgcataataaaattgatgagacccaagtgtaat
gataattggcattcaggtaacgacagttttaagagtaataaaaaaaataaattaacactt
atgtttcctggtttggcattaccaaatgataaatttagcgcacatattaaagatggtgaa
aaaaaagatgacgttgcaaacaatgcaaccgtcgatggaagtaacgacaaaactgttgtt
gacgatctaatgatggaactggaatcattggctccaagtgttgaggttgcaacaaaaaca
aaacagcggtcaaatagtccttcgatgaaaaatcaaaaaaccggaacagatcctataaaa
tgcaattggaaacgtcttcgtagtccaaatagaaggtcaaataaacatcgctcacgcgaa
cggaatgaaagaaaaagaagatcgagatcaaaatctagggatcgtacaaggcgtcgctcc
cgttctaggtcgcatgaacgcagtagaaaatatcgttctagatcgcgttcccatgaacgc
cgccgtgacagtaaaagagaacgaaaagcaacgccaactccaatgcctgacgaccctgaa
ccaggcaatatttacagtggtaaagttgagaatattgttccattcggttgctttgtacaa
ctgtttggtcttcgcaaacgttgggaaggtttggtgcatatatcacagttgcgctcagag
ggacgggtaacagatgttacagaagttgtgcaccgtaatcaaacagttaaagtaaaagta
atgtccataactggacaaaaagtttcactttcaatgaaagaggttgaacaggaaacgggt
agggatttaaatccactttcccatgcaccaccgccagagcaggaacatagggaccgcaat
ccggatagaccatttagtagtagtacttccttgcttaatttaaagggcggaaatatggat
aacgatgaaaacgaatcgcgtaagcgtgtcactcgtatatctagtccagaacgttgggaa
attaaacaaatgataagttctggtgtgcttgatcgtagtgagttacccgattttgatgag
gaaacggggttattgcccaaagaagaagacgacgaagctgatatagaaattgaaattgtt
gaagaagaaccaccatttttatctggtcacggtcgtgcattgcatgatctctcacctgta
cgcatagttaagaatccagatggttcactggcacaagcagctatgatgcagtcagcactt
tctaaagaacgtcgggaacaaaaaatgttacaacgcgaacaagatatggatgcgttacca
gctagcttaaacaaaaattggattgatcctttacctgaagaagatagtcgtacattggca
gcaaatatgcgtggtattggtgctgcacccatggaagtaccagagtggaagaaacatgtc
attggtggcaaaaagtcatcctttggtaaaaaaactgatatgtctttagtagaacaacgt
caatcacttccaatttataaattgcaagatgatcttattaaagcggtgtctgataatcaa
attctaattgttatcggtgaaacgggttcaggcaaaacaactcaaattactcaatattta
gctgaatgtgggttcacagcacgaggaaaaatcggttgtacacaacctcgacgagtggct
gccacttcagtagcacaacgtgtggcagaagaatatggttgtcatctaggtcaggaagtt
ggttacaccatacggtttgaagactgtacaagtcctgagactaccattaaatacatgact
gaaggaatgttacttcgcgaatgtctacttgaatctgatctgaaatcttactcggttata
atgttggatgaagcacacgaacgtaccatatacactgatgtcttatttggtttactgaag
actgctgtacaaaaacgacccaaattgaaactcattgtaacttctgctacgttagatgct
gtcaaattttcacagtactttttcgaagcacccatatttactatacctggtcgtacattc
cctgttgaagtgttatatactaaagaacctgaagtcgattatttagattcttcattaatt
actgtaatgcaaatacacttacgtgaaccacctggagatatactactcttcttgactggt
caagaggaaattgatactgcatgtgaaatactctatgagcgaatgaaaagtttgggctct
gatgcacctgagttaattatattacccatctattctgctttaccttcagaaatgcaaaca
cgtatttttgatccggcacctgcgggtagtcgaaaagtggttatagccacaaatatcgcc
gaaacatctctgacaattgatggaatattttatgtagttgatcccgggtttgtcaaacaa
aaagtctacaattcgaaaactggatttgactcattggtggtcacaccaatttcacaggct
tctgctaaacaaagagctggtcgtgccgggcgtacaggacctggtaaatgttatcgctta
tacactgaacgtgcttatagggatgaattgttaccttcaccaataccagaaattcaacgt
acgaatttagcttacattgtgttacagctgaaaactatgggcataaatgatttattaaat
ttcgattttatggatgcgccgcctgttgagtcgttagtgatggcattggaaaacctgcac
tcactgtcggcacttgataatgagggtttactaacacgtttgggaagacggatggcagaa
tttcctttagagccgaatctttcgaaaatgcttattatgtctgtagctttgcaatgctcc
gatgaggtattaactattgtctccatgttgagtgtacaaaatgtattttacagacctaag
gataaacaagcactagcagatcagaaaaaggcaaaatttaatcaagctgagggtgatcat
ctaacgttacttgcggtttacaacagctggaaaaacaataaattctccaatgcatggtgc
tatgaaaattttgtacaaatacgcacacttaaacattcacaagatgttcgaaagcagctg
cttggcattatggatcgacataaactggatgttgtatcagcaggaaaaaattctgtgcgc
atacaaaaagcaatatgttctggtttctttagaaatgctgcgaaaaaagatccacaggaa
ggttatcgtactctggtagactctcaagttgtttacatacatccgtcaagtgctctcttt
aatcgacaaccggaatgggttatatatcacgagcttgtacaaactactaaagagtacatg
cgagaagtaaccaccatcgatcctaaatggttggtggaatttgcaccatctttctttaga
ttctctgaccccacaaaattaagtaaattcaagaaaaatcaacgtcttgaacctctctat
aataaatatgaggaaccgaatggttggcgcatatccagagttcgaaagagaagaaactaa
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