Teleopsis dalmanni (Malaysian stalk-eyed fly): 119674380
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Entry
119674380 CDS
T09311
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tda03009
]
119674380
Ribosome biogenesis [BR:
tda03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
119674380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
BioT2
Motif
Other DBs
NCBI-GeneID:
119674380
NCBI-ProteinID:
XP_037941443
LinkDB
All DBs
Position
2:41967807..41980046
Genome browser
AA seq
2903 aa
AA seq
DB search
MAHLKFWNAFQALAGPIVKKKTMSQASKSAAIQVDKNATPKTQMSIDTLAALRKKHDTTN
VIQRMDDVHSKDINGPNKAIGLTVAECVKANKTKIEPPPSNNQSKNTSSYSGTQDPPKSK
YQFYPKYHAPPLRVFQFKSFGERINEIDLRQLALYHIEHENERLPEDDETYFYQTLKKWT
IINLTNEFSALSRKFTKIVTLAQLLHERDFVVDALLEHLSTATVLSLQPTLELLYVLGRD
LREDFYVYFQRILDRLICLFNTQDGDQLEWTLICLAHLFKTLKPYLKKNIGVVFNAILPL
LDEQCYEEHVTNFAVECFAYVARDLRDYRKFLDFVLETVRREQVDSVRGCGRLIFEILRG
VKGQLHSVAGNLLQFLFECLVDEQRKDKVKAQLLFEIVRYAMQELLIFVNVGSVNLFWQK
LCEVAKCRQNCNKLEYLLPIFILGAEYKNGRYLAEMDVVVPTVLKLYDICKQAKPEKSRE
ALELLVTLVAKILLSDSNQLTQLDTSRLIKKLLTLEQREIYSTFVLAVVNHAQFELLILP
AVVSHFEQQLDLESFELLSRVVLQKQPLALNASGLQQWKRYALQVKSQSTLKKIVSRLQE
LSKSAEHLEEYLLLLILVPHLNALDVDSLTASFVDAVEECVKKINASVESQKYLLLLAVL
VETSIHIDVNLKKQQLEGILNCLLAHVCNPHVLGMLDLLLFKYSTTIKTNKELPAQLSML
LGQHNRNIRLTAAHCLHTLHKSTAGKSPNPYKIFYDAECIEPNVYNYREQLLLLQKLETA
GEYFKSMTDNNYRMDTLRYLLGLLYINFKPIWLPVLKLVEEYAKVLPAQDFWLIFKEKLE
STAAAIHYEEVEQAVLPAESVAIQWQSVALNDLLTPHVSVPLTQQELFNYRNLLWTRLPQ
FGQLVEIKNRDLVTLFLNFVSEEYRKHLEKYEFNWNLLATSETQIALEMEDADDDEADDD
DMQQSSGNSTPKPKRRVKQKQNTKAKFILETLKSKLGIFVNQPNPKALYREPKLYSFYMD
LLACPNAQLQKVALDCVLAYKVKALLNYKEQLYGIIDDNKFKEELINFKLDTVVEEQRQP
LMLILLRLLYGKMITKGAQRNVSPQARKALILRFLGQCTTDEMLWFLQMAFGKYDKYTND
AVNLNEVPALVAADFQLSAVCSAKKLQNIVNLLELIRKEFGGLVQREFHMYMIKLLTFVG
SVCNAVLQTDTSQLHAKMPVVYKNVKNNALQGLVNFFAHITEFEWQLADMKCLTEVFVWP
TIEKLPLDGIHSPTNLLKLLLQWGEQPKLFIYLNQPHASSQQVIFHYIMELLLNEKTKAA
VRKPILELIERLLVAYEAYKLTPTTTYNTLELLKPFIPQILKRLRMNLAAKRTGKQNLDK
RELNILSLLTTHVEDAETCDSLLQLLLPILIARTQTVAGEEQVITQVINTLSNLIKRLSS
PELYLLKIAPLFEQVQEVTGRKMLCQLVADIAKVRCKQTDDSNSIEVALCERLKKIARIM
HMLNAWDKRWVEQPDYEMRLEAFKEITQQVNAATVDMDLGVLVIYNCFYFIKYDKDMGLR
DNASEQLKLLVPKLLQIYAADKVQLRYLMNDVLLNLLRRLIRDHNDNARNEGIRLLGEMV
RTSAFAHEVLVDLEPLVNKQDADADFFENITHLQIKMHGRALLKFAQAAETFIKPPNAQT
LTQFVLPLTSRYLLQEKYAGMNSVVDAAIEAVGVACQLLPWTQYYNVLRYYLSKMRTSLE
QQKQSVRIVVRILDAFHFDLTKAETDQLALTQLKQELTEYGVAESKVKKIDTTVAKTTET
SLSENVSNNKDEEVDEDNKAQADDTTNFDADLEADSESDVETENETTNTVNVTQKSLLQQ
HLVLSVGAAKRVISTITTILIPTLNRSITEKSSYDTKHKVNRKRLSIEREEEEILRVPIA
LAMVKLLQKLPKDLLDASLPGIFMKVCTFLRSPLKSVRRFTLDNLKKIMKSLGSSYLALL
MDHLQTLLTRGFQIHVLSVTVHGVLDELREILQAGDIDRCLGNVLEVAMNDIFGEAAVEK
SIDKITAHTPEAKPSAKSYLILHIVARNIQETCLLDLLLPFRDHLTRSQSRKVTMKIQDC
FAKIVAGLVENAHITCQSLLYFVYGTISESITDLLPGTQKRVLSDQEKEKMRRARPDCYI
IQPAPRTRSGAVNKIVKSNAQANAHILIEFGLEMLYIVLKRKKLMSVNYQPFLHPLLPLL
RDSLKSTHIRCTTFALKCFASIWNEEYELPALQEYITDIVSRMFEILKNFSTFGATKQED
NFQLVKSSFKAIVALLRKYTEYELTEEQITQLVLYIEQDLYEGENQAMCLPLLKALVTRK
VDSRALHELMKKIGDLSIVSQSDFVRNETRAILFIYLMEYKLKHRVDQVIKFMSAQLCYS
LPTGRQSVIKFFHTVIQKFPHKILAKRAEFLFLTLGLRLVNDDEPDCRRAVAECIELLIN
RLDKVNRQLLFDIILLLMESNDKATTREMGACLCSRFVNVEKQSFSPRLKTILSSIQARI
TLNNPNAPGRFVRAPAVLGVDVHAEDVIQNHKNKGRRRELYEKMDHLIGNEEALAETVEE
KQRAIDHEVIQMQYCLLKIFDYCGQTCFSNEELVNIVDELAYESQRLLAHEHSLVRCNAA
KILTHVLGNYDFDLVAQIINKEKTLESINPQSAKLNYIYINPELDIKSLTLDLCAQITPG
DTAQEMIDEIVKIFLYIGNMLRNVSLANVEIKINLHWFARRIRFLINKEVARAPHSTQIR
TALFTLIEGFITLLSVETIEILLPTLLPTLVREMSEDDDSVDLKLRQLALHVGSRLRKRI
GSDLYDKLRTNVQTELMMRRAERKKVIAQEKIHDPVRAAKRKVGIQERKKAAKKRKTELM
RGKVEDVKQKLKKRKRKAEDDLF
NT seq
8712 nt
NT seq
+upstream
nt +downstream
nt
atggcacatttaaaattttggaatgcttttcaagcactcgctggtcccattgtaaagaaa
aaaacaatgagtcaagctagtaagtctgcagccattcaagtagataagaatgcaactcca
aaaacacaaatgtccattgatactcttgccgctctaagaaaaaaacatgatactacaaat
gttatccaacgtatggatgacgttcatagtaaggatataaacggaccaaacaaagcaatc
ggacttacggtggctgagtgtgttaaagcaaataaaactaaaattgaaccaccgccgagt
aataatcaatccaaaaacacgtcttcatattctggaacacaagatccgccaaaaagcaaa
tatcagttttatccaaaataccatgcaccacctttgagagtctttcaatttaaatctttc
ggtgagcgcataaatgaaatcgacttgcgccaactcgctttgtaccacattgagcacgaa
aatgagcgactgccggaagatgatgaaacttatttctatcaaacgttaaaaaaatggaca
ataataaatttgaccaatgagtttagtgcgttaagtcgaaagttcactaaaatcgtcacc
ttagcacaactcttgcatgagagggatttcgtggtcgacgcactactcgaacatttgtcc
acagctacagtgctctcattacagccgacactggaattattgtatgtgttgggacgtgat
ttgcgtgaagatttttatgtctactttcaacgcatcttggatcgtttgatctgtttattt
aatacacaggatggtgaccaattggaatggacgcttatatgcttggcgcatttgtttaaa
actttgaaaccatacctcaaaaaaaatataggagttgtattcaatgctatactaccactg
ctagacgagcaatgttacgaggagcacgtcacaaactttgcagttgaatgcttcgcttat
gtcgcgcgtgaccttagggattatcgcaagtttctggattttgtgttggagacggtgagg
cgtgagcaagtagatagtgtacgcggatgtggacgtttaatttttgaaatactgcgtggc
gttaaggggcagttgcactcggtcgctggtaatttgctgcagttcctatttgaatgtttg
gtggatgagcaacgtaaagataaggtgaaggcgcagttactatttgagattgtgcgttat
gccatgcaggaactgttgatatttgtaaatgttggtagcgtaaatttgttttggcaaaaa
ttatgcgaagtggcaaaatgccgacagaactgtaacaaattggagtatttattgccgata
tttattttaggcgctgagtataaaaatggacgctacttggcggaaatggatgtggtagtg
ccgacagtactaaaattatatgatatctgtaaacaagctaagccagagaagtctagagaa
gccttggaattgttggtaacgctagtggctaaaattttgttgtcagactcgaatcaattg
acgcagctggacacgagccgtttgattaagaaattgttgacgctggaacaacgtgaaatt
tacagtacatttgtgctcgctgtagtcaatcatgcacaatttgagctgttaatattgcct
gcagtggtgagtcattttgaacagcaactcgatttggagtcatttgaactgttaagtaga
gtcgttttgcaaaagcaacctttagcattaaatgccagtggtctacaacaatggaaacgt
tatgcattacaagtaaaaagccagtctacactgaaaaaaattgtcagcagactacaagag
ttgagtaagagcgctgagcacttggaggaatacttgctgttactgatattggtgccacat
ttgaatgctttggatgtggactctttaacagctagctttgtagacgctgtggaggagtgt
gtaaaaaaaattaacgcttcagtagagtcgcaaaagtatctactactcctagctgtgcta
gttgagacaagtatacatattgatgtcaacctcaagaaacagcaattggaaggcatacta
aactgtttgttggcacatgtgtgcaatccacatgtcttaggcatgctggatctgctgtta
tttaaatatagtaccacaatcaaaacaaataaagagctacctgcgcagctatcaatgctt
ttaggtcaacataatcgcaatatacgtttaactgcggcacattgtctgcacacgctgcac
aagagtacagcgggaaaaagtccaaatccttataaaatcttctacgatgctgaatgcatt
gaaccaaatgtctataactatcgcgaacaattgttgttgctgcaaaagttggagacggcc
ggtgagtactttaagtccatgaccgacaataattacagaatggatacattacgttacttg
ctgggtttattgtacataaacttcaaacccatttggttgccagttttgaaactggttgaa
gagtatgccaaagttttgcctgcgcaagatttctggttgatcttcaaggaaaaactggag
agcacagcggcagccatacactatgaagaggtagagcaggcagtgctaccagcagaaagt
gttgcgatacaatggcagagtgtggctttgaatgatttgttaacaccgcatgtttccgtg
ccacttacgcagcaagaattatttaattatcgtaatctgctatggacacgtctgccacaa
tttggtcagcttgtggaaattaagaatcgtgacttggttacgttgtttcttaattttgtc
agtgaagaatatcgcaaacatttggaaaaatacgagttcaattggaacttattagctaca
agtgaaacacaaatagcattagaaatggaggatgcggacgatgatgaagcagacgatgat
gatatgcagcagagcagcggcaacagcacaccaaagccgaaacgtcgtgtgaagcagaaa
caaaatacgaaagctaaattcatactagagactttaaagagtaaacttggtatattcgta
aatcaaccaaatcctaaagcactttatcgcgagccaaaactatatagtttttatatggat
ttacttgcttgtcccaatgcgcaattacaaaaagtggcgttggattgtgtactcgcttac
aaagtaaaagccttgcttaattacaaagaacaattatacggcatcattgatgacaacaaa
ttcaaagaagaactcatcaattttaaattggacacagtagtggaagagcaacgtcagcca
cttatgttaatactgctacgtttgctctatggcaaaatgatcactaaaggtgcacaacgc
aatgtcagtccacaagcgcgtaaagctttaatcctacgctttttgggtcaatgtacaacg
gatgaaatgctttggtttctacaaatggcatttggaaaatatgacaagtacacaaatgat
gccgttaacttgaatgaggtgcctgcgctagtagcagctgattttcaacttagcgctgtc
tgttcagcaaagaagctgcaaaatatagttaatctactggagctcatacgtaaagagttt
ggtggcttggtgcaacgagagttccatatgtacatgatcaaattgctcacatttgtgggc
agcgtttgtaatgctgtgctccaaacagacaccagtcagctgcatgccaagatgcctgtt
gtctataaaaatgtgaaaaataatgctttacagggtttagtcaatttctttgcgcatatt
acagaatttgagtggcagctagcagatatgaagtgcttaactgaagtcttcgtttggcca
acaatcgaaaaattacctctggatggcatacattcacccaccaatttactcaaattgctc
ttgcagtggggagaacaaccgaaactttttatttatctgaaccagccgcatgcgagcagt
cagcaagtcatttttcactatatcatggagctgttgctgaatgagaaaacgaaagctgct
gtacgaaagccaattttagagttaatcgagcgtttgttggttgcctacgaagcttacaaa
ctaacacccacaacaacatacaacacacttgagttgcttaaaccattcataccacaaata
ttaaaacgcttgcgcatgaacttagctgccaaacgtacaggtaaacagaatctagacaaa
cgtgagctgaatatactctctttgctgactacgcatgttgaagatgcggaaacatgcgat
agcctactacagttgttgctgcccatactcattgcccgtacacaaacagttgccggtgaa
gagcaagtcattacacaagtgattaacacgctatcaaatcttataaagcgcttgtcaagt
cctgaattgtacctattgaagatagcaccactatttgagcaagtgcaggaagtgacagga
cgtaaaatgctctgccaactggtagctgacatagctaaggtacgttgtaagcaaacagat
gattccaattctatagaagttgcactatgtgaacgcctgaagaagattgcacgtattatg
catatgctgaatgcttgggataaacgttgggtggaacaacctgactatgaaatgcgtttg
gaagccttcaaagaaatcacacaacaggtaaatgctgccacagttgatatggatcttggt
gtgttggtgatatacaattgtttttacttcatcaaatatgacaaagacatgggtttgaga
gataatgccagcgagcagctaaaactactcgtgcccaagcttttacaaatatatgccgca
gataaagtgcaactcagatatttgatgaatgatgttttattaaatttattgcggcgtctc
atacgtgaccacaatgataatgcacgtaacgaaggtataagactgcttggcgaaatggtg
cgcacatctgctttcgcacacgaagtcctcgtagatctggaaccacttgtgaataaacaa
gacgccgatgcagatttctttgaaaatatcacacatttgcagataaaaatgcatggacgt
gcactactgaagtttgcacaagctgcagagacattcatcaaaccacccaatgcacaaact
ctaacacagtttgtgctaccattgacttcaaggtatttgctacaagaaaaatatgctggc
atgaattcagttgttgatgccgctatagaggctgttggagtggcttgtcagctcttgcct
tggacacaatactataacgtattgcgttactacctctctaaaatgcgtacatccttggaa
caacaaaagcagagtgtgcgtattgttgtgcgcatactagatgccttccactttgatttg
acgaaagccgaaactgatcagttagcattaacacaattaaagcaggaattaactgagtac
ggagttgcagaatcaaaggtaaagaaaatagacactacagttgcgaaaacaacagaaacg
tcactgtcagaaaatgtctccaataacaaagatgaagaagttgatgaagacaacaaagca
caagcagatgataccacaaattttgatgctgacttggaagctgatagcgagtcagatgtt
gaaacagaaaatgagacaacaaatacggttaatgtgacacaaaagtctttactgcagcaa
catttagtgttgtccgttggtgctgccaaacgtgtgatatccaccataactactatactc
atacccacgcttaatcgttccattaccgagaagagtagctacgatacgaaacataaagtg
aatcgcaagcggttgagcattgaacgtgaggaagaagaaattttacgtgtgcctatagct
ttagctatggtgaagctgctacagaaactacctaaggacctattagatgctagtttacca
ggtatttttatgaaagtctgcacgtttctacgttcacctttgaagtcggtgcggcggttc
acacttgacaatctgaaaaaaataatgaagtccttgggttctagttacctagcattgctt
atggatcatttgcaaacactactgacccgtggtttccaaatacatgtgctttctgtcact
gtgcatggtgtactcgatgagttacgtgagatattacaagcgggtgatatagatcgctgt
ctaggcaatgttttagaagtggctatgaatgatatttttggagaggcggctgtggaaaag
agtattgataagatcaccgcacacacgccagaagcaaagccaagtgccaaaagctatcta
atcttgcatatagtagcgcgtaacatacaggaaacatgtttactcgatttactcttacct
tttcgggatcatctgacacgttcacagtccagaaaagtaactatgaaaatacaagattgt
tttgccaaaattgttgctggtttggtggaaaatgcgcacataacatgccagagtttactt
tattttgtttatggtacaatatcggaaagcataaccgacttattgccgggcacacagaaa
cgagtgcttagtgatcaagagaaggagaaaatgcgacgagcgcgccctgattgctatatc
atacaaccagcgccacgcacaagatctggcgctgttaataaaattgttaaatcgaatgca
caagcaaatgcgcacatattgattgaattcggtttggaaatgttgtacattgtcctgaaa
cgtaagaagcttatgtcggtgaattatcagccatttttgcatcctttactaccactcctt
agagattccttgaaaagcacacatatacgctgcacaacatttgcgctgaaatgttttgct
tcgatttggaatgaggaatatgaactgcctgcattacaggaatacataacagatattgtg
tcacgcatgttcgaaatactaaagaatttttccactttcggtgccactaaacaagaagat
aactttcaactggtaaagtcatcctttaaagcaatcgtcgcacttttgcggaaatatact
gaatatgagttgactgaagagcaaatcacgcagctggtgctttatatcgagcaagatttg
tatgaaggtgaaaaccaagctatgtgcttaccactgcttaaagccttggttacgcgtaag
gtggactcaagggctttacatgaattgatgaaaaagatcggcgatctatccattgtttct
caatcggatttcgtgcgtaatgaaacgcgcgcaatacttttcatctaccttatggaatat
aagcttaaacaccgtgtggatcaggttataaaattcatgtcggcacaactgtgttattcc
ctgccaactggacggcaatcagtgattaagttctttcacactgtcatacaaaaatttcca
cataagattcttgcaaaacgtgccgagtttttgtttctaacgttgggtttacgtttggtc
aacgatgatgaacctgattgtcgtagagcagtcgcagaatgcattgaattattaataaac
cgtttggataaagtcaatcgtcaattgctatttgatattattttattattaatggaatct
aatgataaagccacgacaagggaaatgggcgcttgtttatgttcacgtttcgtcaatgtc
gaaaagcaatccttttccccgcgtctaaagacaatattgtcctcaatacaagcacgtatc
accctaaacaatccaaatgcgccgggtagatttgtacgtgcccccgctgtcttaggtgtt
gatgtgcatgcggaagatgtgatacaaaaccataaaaataaaggacgacgtcgtgagtta
tatgagaagatggatcatttaattggtaatgaagaagcacttgctgagacagttgaggaa
aagcagcgagcaatcgatcatgaagttatacaaatgcaatattgtctgctgaagatattc
gattactgcggtcaaacatgtttctccaatgaagaactagtaaatatcgtcgatgaactc
gcctatgagtcacaacgtctacttgcacatgaacactccctcgtgcgctgcaatgcagcc
aaaatactcacgcatgtactgggaaactatgatttcgatttagttgcgcaaattattaat
aaagaaaaaactttggaaagcataaacccacagtcagcgaagctcaattacatttacata
aatcccgaattggatataaagtctttgactctggatctttgtgcgcaaattacacctggg
gatactgcgcaggagatgatagatgagatagtgaagatatttctctacataggcaatatg
ttgcgaaatgtatcgctggcgaatgttgagatcaaaataaatttacattggtttgcacgt
aggatacgttttctgattaataaggaagtcgctagagcaccgcactccacacaaatccgt
acagcactattcactcttatcgaaggatttatcacgttgctgagcgttgagaccatagag
attttgctgcccacacttttgcctacacttgtgcgtgaaatgtcagaggatgacgacagt
gtagatctgaagctgaggcaattagctttgcatgttggcagtcgactacgtaagcgtatt
ggctctgatctctatgataagttgcgtacaaatgtacaaactgaacttatgatgcgccga
gctgaacgtaagaaggttatagctcaagagaagatacacgatccagtacgtgccgcaaaa
cgtaaggtcggcatacaggaacgtaagaaggccgctaaaaaacgaaaaacagaactgatg
cgcggtaaagtggaagacgttaaacagaaactgaagaaacgaaaacgtaaagccgaagat
gatttattctag
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integrated database retrieval system
