Teleopsis dalmanni (Malaysian stalk-eyed fly): 119676484
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Entry
119676484 CDS
T09311
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03020
RNA polymerase
tda03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119676484
09124 Replication and repair
03420 Nucleotide excision repair
119676484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tda03021
]
119676484
03400 DNA repair and recombination proteins [BR:
tda03400
]
119676484
Enzymes [BR:
tda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119676484
Transcription machinery [BR:
tda03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
119676484
DNA repair and recombination proteins [BR:
tda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
119676484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_7
Motif
Other DBs
NCBI-GeneID:
119676484
NCBI-ProteinID:
XP_037943651
LinkDB
All DBs
Position
2:complement(194714798..194725033)
Genome browser
AA seq
2081 aa
AA seq
DB search
MTPQLSTVKCIQFCILSPEETRRMSVTPGGIHRIVAFDNHDPVLNGVCDPRLGAIDRYAL
CQTCECDLAKCTGHMGHIEFCVPLYHIGFMNKVLNTLRCVCLTCSKLLITYDCPEMQRIL
RRYRNSPSLRLDAVTRLCVTKKFCSTNIDSKDFTNEPDLGCGAFKPRLMRNGVDIEIVLE
KNFDNPTDEPTEILPTHKVLQILKAITDDDCRLMGFSPKHSRPEWMLFQVMPVSSLSVRP
AVLVNSVNRAQDDLTFMYLNIVKANNELSAKINCDAAEGVIRDNYLFLQYAVNAIIKNDA
CGAPTVIHRSGRPLKSYSMRLKGKEGRVRGNLMGKRVDFSARTVITPDPSLNIDQVGVPR
SIAATLTFPEVVNDFNIKRLTLLVRRGNHFPGAAYVIRDTGERLNLSTIPDLSSLQLLKG
YTVERHMQNDDLVIFNRQPTLHKMSMMGHRCKILPWSTFRLNLSCTSPYNADFDGDEMNL
HFPQTQMTRSEVANIHISSRQLITPQSNMPVMGIVQDALIGAYKMTQRNVLIERHEVMNL
LMTIPSWRGVLPIPCIVKPVQLWSGKQVFSEVIPEVISMIRTNSIHQEEEDSSIYCWMSN
ADTKVIIDDGHLVAGTLCKRTLGATYGSLMHITYIELGHKVAADLCFGIQKVANAWLAGN
GHSVGIADAIADNATYKLNEEAISNAENEVRNVLFKAMCGKLEPLPGNTIWQTCESKVNH
ILNDARDKTGMQARNSLKPWNNFKAMVIAGSKGSNINISQVLACVGQQNVEGRRVPFGFY
QRTLPHFSKNDYSSQSRGFVANSYLSGLTPSEFFFHAMAGREGLIDTAVKTAEIGYIQRR
LIKAMESVMVQYDDTVRTCDHNLLQLLYGEDGLRGEYVEFQSLPTIPLSNRTFENQYKYN
TRERLDDYFTREALDEMRNAKNLITTIEEEWAQLRKDREELREVFPTGDAKAVMPINLQR
ILGKVKTMFHIHNCTKSDLTPIDVVNGVRSLIDKCNVVLGDDRLSLEANYNATLIFRSLI
RMELCSKKVIKKHHLTKNAFEMLLGEIHQRFELAKVSAGEMVGALSAQSVGEPATQMTLN
TFHFAGVSSKNVTLGVPRLKEIINLSQQPKAPSMTIYLLGPATTDAEKANEIVHQLEVTK
MKQIIFSTEIYYDPDITNSVVTDDQDFLDLYTQIPDFEIDKITKWTLRIIFERKAMIDRR
ITMENLAEKIEKLFGDDLRCLYTDDNADILVMRIYLQDVAKYGLDDNGSVRRKSFSQGAN
MERDFDQLSFLQNLEQNVLMDITIMGIETVTKVYMHLPTMTNKQRTIIGSDGEYVRVSEW
MLETDGTAFLNVIGRPEIDSIRTYTNDIWDNFHVLGVEAVRQVIHRELNSVLTFYGLYVN
YRHLALLCDVMTARGHLMSITRHGINRQETGPLMRCSFEETVEVLMDAAAFGECDSLKGV
SEKLIVGQIPQIGTGSFSLGCNLELCMKPAKTKAVKKSNRRNMGPFCSVEYFASSPSSEL
LTPSHTPQTPNFYPFMSLNSISDSPYSPSSDISEISYPSSPNRAFSPSYPMYSPEFELQT
GLSPLYNRGYYSSDKSPNKSPSYSPLISTSPFYSALSPLYSPLSPLYSGSNLYNISPIQT
PRSSYTHNSPSPINSLFSKFSSSPQSPCSEYSPTSPEFESGDISYSPSSPIMTPNMTKHK
YLPDSPIPLYAVTKASTEPKLGTQYSPTSPLTTPLYTSSSDQYSPSSPTSPISPDSPTSE
EASISMQPAFIFSPCFSPRKAPASSRYPTYSPSSPTTIDADIEKELKDAHGNIYSSYSPT
SPSPDTYSPTSPTSSLYSPTSPITITNSPTLPYSTTYSPTSPRYSNSYSPDERISDKNYP
ISADNYNAYSPTSPTYSDEYSPESPRYSNSYSPSSPQTIFKYLPKTLQPTKRTPRFSSPY
SPSPIRITGASSPMQSYSPTSPELSTPSSLKSSPNLSSYSPTSPQLSSPYTPMSPQLTTQ
YSPSSPCLSDSSSIISPQQSTPYSPSSPLYLLSNENNLSPSEGTQATLTLPTYTPSSPNF
TPNLNEPYSTSPYYTPSTPSTCTDIQIDLNDTDDEDFIVID
NT seq
6246 nt
NT seq
+upstream
nt +downstream
nt
atgacacctcaacttagtactgttaaatgtatacaattttgcattttgtcaccagaagaa
accagacgtatgtctgtcacacctggaggcattcatcgcatcgtagcatttgataatcat
gacccggttttgaatggagtgtgtgatccgcgacttggtgctattgatagatatgctctt
tgtcagacatgtgaatgtgatttagctaaatgcaccggtcatatgggtcatattgaattc
tgcgttccactttatcacattggttttatgaacaaagttcttaacactttaagatgcgtt
tgtcttacgtgctcgaaattgttgataacctatgattgcccagaaatgcaaagaatatta
aggcgctatcgcaattctccaagtctacgtcttgacgcagtcacacgtctgtgcgttacg
aagaagttttgttctacaaatatcgattccaaagatttcacaaatgaaccagacttgggt
tgtggtgcttttaaaccaagattaatgcgcaatggcgttgatattgaaatcgtattagaa
aaaaattttgataatccaactgacgaaccgactgagatactacctactcataaagtttta
caaattttaaaagcaattactgatgatgattgtcgtttaatgggtttcagtccaaaacat
tcaagacctgaatggatgctttttcaggtaatgcctgtttcatcattatctgttcgccct
gccgttcttgtgaattctgtgaatcgagcacaggatgatttgacatttatgtatctaaat
attgtaaaagcaaataacgaactaagtgctaaaataaactgcgatgcagctgaaggtgta
ataagagataattatttattcttacaatatgcagtaaatgccattatcaaaaatgatgcc
tgtggagcaccaacagttatccatagatcaggacgtccattgaaaagttattcaatgcgt
ctaaaaggaaaagaaggacgcgttcgaggaaatttaatgggaaagcgtgtagatttctcc
gctcgtacagttataacacctgatccatcactgaatattgatcaagttggtgtgccacga
tcaattgcagcaacgcttacattcccagaagttgttaatgattttaacattaaacgctta
acattgctcgttagacgtggtaatcattttcctggggctgcatatgtaattcgcgacact
ggtgaacgtcttaatcttagcaccataccagatctgtcttcgttgcaattgctgaaaggt
tatactgtcgaaagacatatgcagaacgatgacttagttatttttaatcggcaacctact
ttacataaaatgtcaatgatgggtcatcgttgtaaaattttaccatggtcaacatttcgt
ttaaatctttcctgtacttcaccatataatgctgatttcgatggcgatgaaatgaattta
catttcccacaaactcaaatgacacgttcagaagtcgcaaacatacacatttcatcccgt
cagttaatcacaccacaatccaacatgccagttatgggtatagttcaagatgctcttatt
ggcgcttataaaatgactcaacgaaatgtgctcatcgaacgtcatgaggtcatgaatttg
cttatgacaataccaagttggagaggagttttgccgataccatgcattgtaaaacctgta
caactttggtcaggcaaacaagttttttcagaagtaataccggaggttatcagtatgatt
cgcaccaattctatacatcaagaagaagaagacagctctatttattgctggatgtcaaat
gctgatacaaaagttattattgacgatggacacctcgtcgcaggaactttatgtaaacgc
acattaggtgcgacatatggttcacttatgcatataacttatattgagttgggtcataaa
gtagccgcagatctatgttttggtattcaaaaggtagcaaatgcttggttagcaggaaat
ggtcatagtgtgggtatagcggatgctatagccgataatgcaacctacaaattaaatgag
gaagctataagtaatgccgaaaatgaggtgagaaatgtattatttaaggcaatgtgcggt
aaactagaacctctgcctggcaatactatttggcaaacgtgtgagagtaaagtcaatcat
atacttaatgatgcacgtgataaaacgggaatgcaagccagaaactccttgaaaccatgg
aataactttaaggctatggttattgccggctcgaaaggttctaacataaatatatctcaa
gtacttgcatgtgttggacagcaaaatgttgaaggccgccgtgtacctttcggtttctat
cagcgtacattaccacatttttcaaaaaatgactacagctctcaatcgcgtggttttgtt
gcaaactcctatttatctgggttgacaccttcggagttcttttttcatgcaatggccgga
cgtgaaggattaatcgatacagcagtaaaaactgctgaaatcggttatatccaacgacgc
ctaatcaaagcaatggaatctgttatggttcaatacgatgacacagttagaacttgtgat
cataatcttttgcaattactttatggcgaagatggtttacgtggtgaatatgtagaattt
caatcattacccacaataccgttgtcaaacagaacatttgaaaatcaatataaatacaat
actcgagaaagacttgatgactatttcacacgtgaagctttagatgaaatgcgtaatgct
aaaaatttaattacaacgattgaagaggaatgggcacagctgcgcaaagatagagaagag
ctaagggaagtttttccaactggtgatgcgaaagctgtcatgccgattaatttgcaacga
atcttaggaaaagtgaagactatgtttcacatacataattgtaccaaaagtgacttaaca
ccgattgatgttgtgaatggtgttagaagcctaatagacaagtgtaatgttgtcctcggt
gatgatagattatctcttgaagcaaattacaatgcgaccttaatttttcgatcgttaatt
cgtatggaactgtgttcaaaaaaagttataaagaagcatcatttgacaaaaaatgctttc
gaaatgttattaggagagatacatcaacgctttgaactagcaaaagttagtgccggtgaa
atggttggtgcactttccgcacaatcagtaggagaaccagcaactcagatgacattgaac
acatttcattttgctggcgtctcatcaaaaaatgttactctaggtgttcctcgtttaaag
gaaataatcaatttatcgcaacaacctaaagcaccatcaatgacaatttatttacttggt
ccagcaacaacagatgcagaaaaggcaaacgaaatagttcaccaactggaagttaccaaa
atgaaacaaatcattttttcaacagaaatttattatgaccctgatataactaacagtgtt
gttacagacgatcaagatttcttggatttatatactcaaatacctgatttcgaaatagat
aaaataactaaatggacgctacgaattatttttgaacgtaaagctatgatagatcgcaga
ataacaatggaaaatcttgccgaaaagattgaaaagctttttggtgatgatctaagatgt
ctctatacagatgacaatgctgatattctggtgatgcgtatctatttacaagatgttgca
aaatatggactagatgataatggaagtgtgcgacgtaaaagtttttctcaaggagcaaac
atggaacgtgattttgatcagcttagctttctacaaaatttggagcagaatgtgttgatg
gatataacaataatgggaattgaaacagtaacgaaagtgtatatgcacttaccgacaatg
actaacaaacaacgaactataattggttcagatggtgaatatgttagagtttctgaatgg
atgttagaaacggatggtactgcctttctgaatgtgattggacgtccagaaatagattcc
atcagaacatacacaaatgatatttgggacaattttcatgtactcggcgtagaagccgta
cgtcaagtcatacatagggaactgaactctgttttaacattttatggtctttatgtaaat
tatcgtcatttggcattgttgtgtgatgtgatgacagcaagaggccatctaatgtcgatt
actcgacatggtattaatcgacaggaaacagggcctttaatgcgttgttcttttgaagaa
actgttgaagtattgatggatgcagctgcatttggagaatgtgatagtcttaagggtgtt
tcagaaaaattgattgtaggtcaaataccacaaattggtacaggttcttttagtcttggg
tgtaacctagaattatgtatgaaaccagcgaaaactaaagccgttaaaaaatcgaataga
agaaatatgggaccgttttgttcagttgaatattttgcaagctcaccttcatctgaatta
ctgacaccatcacacacaccacaaacaccaaatttctatccattcatgagtttaaacagc
atatcagatagtccttactcaccttcctcagatatatcagaaataagctacccaagttct
ccaaatagagccttttcaccatcatatcccatgtattctcccgaattcgaattacaaaca
ggattatcaccattatataatcgtggttattactcttctgataaatcgcccaataaatct
cctagttattcaccgcttattagcacttctccattttattctgcactttcacctttatac
tcacctttatcacctctgtacagtggttcaaatttatataacatttcaccaatacaaaca
ccaagatctagttatactcataactcaccctctccaattaattcacttttttctaaattc
tcgtcctcacctcaatctccctgctcagaatattctcccacttcaccggaatttgaatca
ggtgatataagttattcgccaagttcgccaataatgacgccaaatatgactaaacataaa
tatttgcctgattcaccgattccattatatgctgtaacaaaagcatcaacggaaccaaaa
ttaggtacacaatattcacctacttcgccattaactacaccgctatatacttcatcttcg
gaccagtattcaccaagttcaccaacatcaccaatttcaccagattctccaacttctgaa
gaagcatcaatttctatgcagccagcatttatattttctccttgcttttcaccgagaaaa
gctccagcaagtagcagatatccaacatattctccatcatcacctacaactatagatgca
gatattgaaaaagaattaaaagatgcacatggtaatatttattcatcttattctccaaca
tcaccatctcctgacacatattctccaacatcacctacttctagtttgtactctccaaca
tcacctattactattacaaactctccaacattaccgtattccactacatactctccaaca
tctccacgatattcaaattcatattctcctgatgagcgaatatctgataaaaactatcca
atatctgcagataattataatgcatattctccaacatcaccaacgtattctgatgaatat
tctccagaatcaccacgatattccaattcgtactctccctcatcacctcaaacaattttt
aaatatttaccgaaaacactacaacccacaaaaagaactccaagattttctagtccatat
tctccatcaccaataagaattaccggagcatcttcaccaatgcaatcttattctccaaca
tcgccagaactaagtactccatcttctttgaaatcatcaccaaatttatcttcctattct
ccaacatcaccacaactttcctctccatacacaccaatgtcaccacaacttactacgcaa
tattctccatcatcaccatgtcttagcgattcaagttctattatatcaccacaacagtcc
actccatattctccttcatcacctttatatttactctcaaacgaaaataatttaagtccc
tcagaagggactcaagcaacacttactttacctacatatactccctcaagtcccaatttt
acaccaaatcttaacgaaccatattcaacatccccttactatacaccatccactccctct
acatgtactgatattcagatagatttaaatgatacagatgatgaggattttatagtgatt
gattaa
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integrated database retrieval system
