Teleopsis dalmanni (Malaysian stalk-eyed fly): 119679192
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Entry
119679192 CDS
T09311
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03013
Nucleocytoplasmic transport
tda03015
mRNA surveillance pathway
tda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119679192
09122 Translation
03013 Nucleocytoplasmic transport
119679192
03015 mRNA surveillance pathway
119679192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tda03019
]
119679192
03041 Spliceosome [BR:
tda03041
]
119679192
03009 Ribosome biogenesis [BR:
tda03009
]
119679192
03012 Translation factors [BR:
tda03012
]
119679192
Enzymes [BR:
tda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119679192
Messenger RNA biogenesis [BR:
tda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119679192
mRNA cycle factors
Stress granule specific factors
119679192
Spliceosome [BR:
tda03041
]
Complex C
Other components
EJC/TREX
119679192
Ribosome biogenesis [BR:
tda03009
]
Eukaryotic type
90S particles
Helicases
119679192
Translation factors [BR:
tda03012
]
Eukaryotic type
Initiation factors
eIF-4
119679192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
TniB
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
119679192
NCBI-ProteinID:
XP_037947329
LinkDB
All DBs
Position
2:complement(204417412..204419065)
Genome browser
AA seq
399 aa
AA seq
DB search
MARKSAPAEDLSNVEFETSEDVEVIPTFNSMNLKEELLRGIYAYGFEKPSAIQQRSIRPI
IKGRDVIAQAQSGTGKTATFSISILQSLETSLRETQVLCLSPTRELAVQIQKVILALGDF
MNVQCHVCIGGTNLGEDIRKLDYGQHIVSGTPGRVFDMIKRRVLRTRAIKMLVLDEADEM
LNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIK
QFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMP
QKERDEIMKEFRAGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFG
RKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaaagtctgcaccagctgaagatctttccaatgtggaattcgaaaccagtgaa
gatgttgaggtcataccaactttcaactctatgaacctcaaagaggaattgttacgcggc
atatacgcttatgggtttgaaaaaccttccgctatacaacagcgtagtataagaccaatt
attaaagggcgcgacgtcatcgcacaagcacaatctggtacagggaaaacagcaactttc
tctatttctattttgcagagccttgaaacaagtctacgagaaactcaagtattatgttta
tcgccgactcgtgaattagctgtacaaattcaaaaagttatacttgctttgggtgatttt
atgaatgtgcaatgtcatgtgtgcattggtggcacaaatttgggtgaggatatacgaaag
ttagattatggtcagcacatagtaagcggtacaccaggacgtgtattcgatatgataaag
aggcgtgttttgagaacaagagctatcaaaatgttggtacttgacgaagctgacgagatg
ttgaataaaggttttaaggaacaaatttatgacgtatatcggtatttaccaccagcaaca
caagttgtacttatatctgctacattgccgcatgagattttggaaatgacttctaaattt
atgacggatccaatacgtattttagtaaaacgtgatgaattgactctggaagggattaaa
caattttttgttgctgttgaacgtgaagaatggaagtttgataccctatgtgacctgtat
gataccttaactattacacaagcagtcatattctgtaatactaaacgtaaggtagattgg
ctcacagaaaaaatgcgagaagcaaactttacagttagctctatgcatggcgatatgccg
caaaaagaacgtgacgaaattatgaaggagtttcgagctggccaatcacgtgtgctaata
accactgatgtttgggcccgtggtattgatgtacagcaggtctcgttggttataaactat
gatctaccaaataatcgtgaattatatatacatcgtattggtcgttcaggtcggttcgga
cgtaaaggtgtagccataaacttcgtaaaatctgatgatatacgtattctacgtgatatt
gaacaatattactctacacaaattgatgaaatgcccatgaatgtagcagatttaatataa
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