Teleopsis dalmanni (Malaysian stalk-eyed fly): 119679254
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Entry
119679254 CDS
T09311
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119679254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tda03019
]
119679254
Messenger RNA biogenesis [BR:
tda03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119679254
mRNA degradation factors
5'-3' decay
Decapping complex
119679254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
119679254
NCBI-ProteinID:
XP_037947427
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All DBs
Position
2:complement(216595054..216602955)
Genome browser
AA seq
1036 aa
AA seq
DB search
MDDDSFFGFDTSIPLDDDGGGRIEEPSEEEYDALNDETFGAAINGDWEEAHESLVRLTDN
FTCSSGERLNSKQHGNNDNRHRLASPTSSRGSSPFYGTRHRNPIADSDLELNLSGMKLDD
VDINFGDGESLSGDLSSGINLDPSVWASQPLKPTNHTHHLDAIKGNNSLFSSINNNSDIK
GLNINPADFLRQHISSPFAHQQQQNHHLQQQQQQQQIKVNTNTNGAFGLSQLPNAGTKPK
ICTVEDIERNIIMQQAMQKQQQQKLKELEQQQKQQQMLNSMFKPATSKTPTPVNPHPNQI
MQTQQQIQHQQQQQQQQQNKGPPGFINAGSPPRPASNLINNLAQHPLNNMLQQPTATGNR
LPPGFPLFNPGMPPGHIQQRGHLHIPPHPLLNQHGLPPNFPHADPRTLPNPHLPIALNNF
AMHPNFNAMRASAVTGMYPPGLIPPAMAQSRMPTHPPNPLQFLHQQQANSMFNMRLVQEI
QQNHPLLQNASRQMLQPQQQQQQQQQQQHANANANHQNQQRAGLKQAHQRRDGISANGNL
PPEEYDEYANLMSIRDKHWLIGIQLSQLNTDTPYIDDYYFTVYRERKSQLSGNVRHSKAH
KDNQLNHPFSQPKGHAQLVLVQLGNKNGTRNGQHRERHNSETSGGNNLNQEQKTPYIFTP
LKFENSLGKLQYGSVTAPRKIIDADIMSGELNDNLSNNLSAAKASGQGIKLPNVTTGNFH
DITISAQRKSRHILLHIETLYRIVLKLDDLENPDAIATIIMKKKKESERIAALEQLENAN
KTPEERAAEATNPQTVNPVLKNKFAYEIETKEALVDKLIAGLKHEKVMAMMNIRKGKNLI
RRIMPYLVDNPVRWNVWISVLASLQNVYKKDREDTEGVLYALYPEFEKQILEANFDTTVK
IAKAIPLKDKKINAVFCSRFGISSLVCLIIQVEQIYVKGIDPTLNEVNKYNWRSFLDEVA
TSLNRTLQSQTINATIESYSIEAVMHHFARFKDLQLDSLLALITKAKEQLFTDISILGKR
SLGLKLITYFQCFESI
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgactcattttttggatttgatacatcaataccgttagacgatgatggagga
ggtcgcattgaggagccctccgaagaggagtatgacgcccttaacgatgaaacatttggt
gctgctattaatggcgattgggaggaagcgcatgaatcgcttgtacgtttaaccgataat
tttacctgtagcagcggtgaacgcttaaatagcaaacaacatggtaataatgataataga
caccggttagcatcgcctacatcgtcaagaggttcttcgcctttttatggcacacgacat
cgtaacccaattgctgattctgatttagaattaaatttatctggcatgaaattggatgat
gtcgatattaatttcggtgatggtgaaagtttaagcggtgatttaagctcaggtataaac
ctcgatcctagtgtatgggcatcacaacctttgaaaccaacaaatcacacccatcattta
gacgcaataaaaggaaataattcattattttcaagtataaacaataactctgacataaaa
ggtttaaatataaatcctgcagattttttacgccaacatatctctagcccttttgcacat
caacaacagcaaaatcatcacttgcaacaacaacagcaacaacaacaaataaaagtgaac
acaaacaccaatggtgctttcggtttaagtcaacttcccaacgctggtacgaaacctaag
atttgtactgtagaagacattgaacgcaatattatcatgcaacaagccatgcaaaaacaa
caacaacaaaaactaaaagaactcgaacagcaacagaaacaacaacaaatgctaaattca
atgtttaaaccagccacttcaaaaacaccaactcctgtaaatcctcatccaaatcaaata
atgcaaactcaacaacaaattcaacaccaacagcagcaacaacaacagcaacaaaataaa
ggacctccaggttttataaatgccggttcaccgccaaggccagcaagcaatttaattaat
aatttagcacaacatcccttaaataacatgctgcaacaaccaactgcaactggtaatcgt
ttaccgcctggctttcctttatttaatccaggtatgccgccgggacatatacaacaacgt
ggtcatcttcatataccaccacatcccttgctaaaccaacatggcttaccaccaaatttt
ccgcatgcagatccgcgcacactgccgaatccacatcttccaattgcgctaaacaatttt
gcgatgcatcctaattttaatgcaatgcgtgccagtgctgtaaccggaatgtatccacct
ggactaattcctcctgctatggcacaatctcgtatgcccacacatccaccgaatccctta
caatttctacatcaacagcaagcaaactccatgttcaatatgcgacttgtacaggaaatt
cagcaaaatcatccattactacaaaatgccagtcgacaaatgttacaaccacagcagcag
cagcaacaacaacaacaacaacaacatgctaacgcaaatgctaatcatcagaatcaacaa
cgcgctggtcttaagcaagcgcatcagcgacgtgatggcatttctgcaaacggtaactta
ccacctgaagaatatgacgagtatgccaatttaatgagcattcgagataaacattggtta
ataggcatacagctatcccaactgaatacagatactccatatatcgatgattattacttt
accgtttatcgtgaacgaaaatcacagcttagtggcaatgtgcgtcatagcaaagcacat
aaggacaaccaattgaatcatccgttctcgcagcctaaaggtcatgcacaacttgtactg
gtacagttaggcaataagaacggcacacgtaatggtcaacatcgcgagcgtcataattca
gaaactagcggtggtaataatttgaatcaagaacagaaaacaccttacattttcacgcca
ctcaagtttgaaaattccttgggaaaattgcagtatggcagcgtcactgcaccacgtaaa
attattgatgcggatataatgagtggagagttgaatgataacttaagcaataacttaagt
gctgctaaagcaagcggtcaaggtattaaattgccaaatgttacaacgggtaattttcat
gacatcaccatatctgctcagcgtaaatcgcgccacatactactacacatcgagacatta
taccgtatagtgcttaagcttgatgatctagaaaatcctgatgctattgcgacaattatt
atgaaaaagaagaaggaaagtgaacgtatcgcagcactggaacagctcgaaaatgccaat
aagacgccagaagagcgcgctgcagaagccacaaatccacaaacagttaatcctgtgctt
aagaataaatttgcttatgaaattgagacgaaggaagcattagttgacaaattaattgca
ggtttaaaacatgaaaaagtcatggctatgatgaatatacgcaaaggaaagaacttaata
cgtcgcatcatgccatatttagtggataatccggtacgttggaatgtttggattagcgta
ttagcttcactacaaaatgtttataaaaaagatcgtgaagacactgagggtgttctgtac
gcgttatatccagaatttgaaaagcagatattggaagctaattttgatacaacagttaaa
attgctaaagctataccattgaaagataaaaaaatcaatgctgtcttttgtagtcgattt
ggaatatcgtcactggtttgtctgataatacaagtcgagcagatttatgttaagggcatc
gatcctacattaaatgaagttaacaaatacaattggcgttcatttttagatgaagtagca
acatcacttaatcgcactttacaaagtcaaacaataaatgccacaatcgaatcttattcg
attgaagctgttatgcatcattttgcacgtttcaaggacttgcagttggactcacttctg
gcgcttataactaaggcaaaagaacaactgttcactgatatatcgatccttggcaaacgc
tctttgggtttaaagctcattacttatttccagtgcttcgaatcgatctga
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