Teleopsis dalmanni (Malaysian stalk-eyed fly): 119679278
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Entry
119679278 CDS
T09311
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119679278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tda03041
]
119679278
03009 Ribosome biogenesis [BR:
tda03009
]
119679278
Enzymes [BR:
tda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119679278
Spliceosome [BR:
tda03041
]
Complex A
U2 snRNP components
U2 related factors
119679278
Complex B
119679278
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
119679278
Ribosome biogenesis [BR:
tda03009
]
Eukaryotic type
90S particles
Helicases
119679278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_19
AAA_22
nSTAND3
SRP54
Flavi_DEAD
ABC_tran
ResIII
AAA_25
AAA_30
PhoH
ATPase
T2SSE
TsaE
AAA_7
HTH_IclR
Motif
Other DBs
NCBI-GeneID:
119679278
NCBI-ProteinID:
XP_037947469
LinkDB
All DBs
Position
2:complement(8821008..8825676)
Genome browser
AA seq
723 aa
AA seq
DB search
MSKRRIDVGDSLAKKKKNELASTSTATVSVGSGALASSRQPSTMNPYSMKPYSAKYFQLH
KKRITLPVFEYQSDFMRLLNEHQCIVLVGETGSGKTTQIPQWCVEYAFSKGKKGVSCTQP
RRVAAMSVAQRVSEEMDVNLGEEVGYSIRFEDCSSAKTVLKYMTDGMLLREAMSDPMLEQ
YQVILLDEAHERTLATDILMGVLKEVIRQRNDLKLVVMSATLDAGKFQQYFDNAPLMNVP
GRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEDVEGDVLMFLTGQEEIEEACKRIKRET
DNLGSDIGELKCIPLYSTLPPNLQQRIFEPPPPRNANGAIGRKVVVSTNIAETSLTIDGV
VFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEKAYKNE
MQENTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDDDG
NLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQCFVRPNEAKKAADEA
KMRFAHIDGDHLTLLNVYHAFKQSNEEPNWCYENFINFRSLKSADNVRHQLARIMDRFSL
KRSSTDFTSKDYYVNIRKALVQGFFMQVAHLERTGHYLTIKDNQNVQLHPSTCLDHKPDW
VIYNEFVLTTKNYIRTVTDVKPEWLLTLSPQYYDLNNFPQCEAKRQLELLQQRLESKQFQ
KGF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaagacgaattgatgttggcgattcattagctaaaaaaaagaagaacgagtta
gcatccacgtcaactgccacagtttcagttggaagtggcgctttggccagtagcagacaa
ccgagcacaatgaatccatacagtatgaagccttattcggcgaaatattttcaattacat
aaaaaacgcataactttgccagtgttcgaatatcaatcagatttcatgcgtctgctaaat
gagcatcagtgcattgtgctcgtaggtgagactgggtctggcaaaaccacacaaataccg
caatggtgtgttgaatatgcattttcgaagggtaaaaagggtgtttcttgcacacaacca
cgtcgtgtagctgctatgtctgtagcacaacgtgtttcagaagaaatggacgtaaatcta
ggtgaagaagttggctattctatacgttttgaggactgttcctctgcaaaaactgtgctg
aaatacatgacagatggtatgttgctacgtgaagctatgtctgatcctatgcttgaacag
tatcaagttatattgcttgatgaggcgcatgaacgtacactagccacagatatacttatg
ggtgttttaaaagaagttatacgccaacgcaatgacttgaaattggtagtgatgtctgct
accttggatgcaggcaaatttcaacaatattttgataatgcaccactaatgaatgtacct
ggtcgtacgcatccagtagaaatattctacactccagagcctgaaagagattatttggaa
gcagcgattcgtacggttatacaaatacacatgtgtgaagatgttgaaggtgatgtactc
atgttcctcactggtcaggaagaaattgaagaagcttgtaaacgaataaaacgtgaaact
gataatcttggctctgatattggtgaacttaaatgcattccactttattcaaccttacca
ccgaacttacagcaacgtattttcgagccaccaccgccacgcaacgctaatggcgcaatc
ggtcggaaagttgtagtatcaaccaatattgcggaaacttcattgactattgatggtgtg
gtatttgtaattgatccaggatttgctaaacagaaagtttacaatccacgtatacgtgta
gaaagtttgcttgtttcgccaatttcgaaagcatccgcacaacagcgtgcaggtcgtgct
ggacgtacccgccccggtaaatgtttccgtctctatactgaaaaagcgtataaaaatgag
atgcaagaaaatacgtatccagaaattttacgttcgaacttaggcaccgttgttttacaa
ttgaaaaaactgggtatagacgatttggtacattttgattttatggatccgccagcacca
gaaactcttatgcgtgctttagaactattaaattatttggctgctctcgatgatgatggc
aatcttacagatttaggtgcagttatgtcagaattccccctcgatccacaattagctaaa
atgttgattgctagttgccaacataactgttcaaatgagatattatccatcactgcaatg
ctgtcggttccgcagtgtttcgtgcgtccgaatgaagctaaaaaggctgctgatgaagct
aaaatgcgctttgcacacattgatggcgatcatttgacacttcttaatgtataccatgcc
ttcaaacaaagtaatgaagagccaaattggtgctatgaaaatttcataaatttccgttca
ttaaaatctgctgataatgtccgccatcaattggcacgtattatggatcggtttagtcta
aaacgtagcagcactgatttcacatcaaaagattactatgtgaatataagaaaggctttg
gtacaaggtttctttatgcaagtggcacatcttgaacgtactggtcattatttgaccata
aaggataatcaaaatgtacagttacatccttcaacatgtttagatcataaaccagattgg
gtcatctacaatgaatttgtactaacaactaaaaattacatacgcaccgttacagatgtt
aaacctgaatggttattgactttgtctccgcaatactatgatctaaacaatttcccacaa
tgcgaagcaaaacgtcaactggaattattgcagcagcggttggaatctaaacagttccaa
aaaggattttaa
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