Teleopsis dalmanni (Malaysian stalk-eyed fly): 119679290
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Entry
119679290 CDS
T09311
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33
KO
K15542
polyadenylation factor subunit 2
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119679290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tda03019
]
119679290
Messenger RNA biogenesis [BR:
tda03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
119679290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_IFT140_1st
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
ASA1
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
DSE1_N
Beta-prop_EIPR1
CFAP251_N
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
eIF2A
WD40_RFWD3
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_NOL10_N
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_WDR41
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_WDR11_2nd
PAC11
Tricorn_2nd
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
119679290
NCBI-ProteinID:
XP_037947484
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All DBs
Position
2:complement(132484781..132503907)
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AA seq
875 aa
AA seq
DB search
MDFQQPPPSIDVTQPPPQLTAPSALATNTTSIPQTAGPPHHRNYFHQHHGGTNKPGHAYF
KPFAPKPYGMTQDDFDGKRLRKSVMRKTVDYNASIVRALETRLWQRDYRDRHAMEPENIY
IPELMPPSSYLDNPSNAVTTRFVKTATNKMRCPIFTLAWTPEGRRLVTGASSGEFTLWNG
LTFNFETILQAHDVSVRTMIWSHNDSWMVTGDHSGYVKYWQSNMNNVKMFQAHKEAIRGI
SFSPNDSKFVSCSDDGTLRIWDFLRCQEERILRGHGADVKCVHWHPQKGLIVSGSKDNQQ
PIKLWDPKSGSALATLHAHKSTVMDLKWNDNGNWLVTASRDHLLKLFDLRNLREEVQIFR
GHKREASSVSWHPTHEGLFCSGGSDGSILFWNVGTDKEIGSIETAHDSIVWTLAWHPLGH
ILCSGSNDHTIKFWTRNRPGDLMRDKYNLNTLPASLAALDDCEYDDAVIPGMGPEDKVEF
TESLTADKGFIPGLDLDPSKISDKDKEKKVPYSKPIPHNFQAQWAGTRRQDETGNIHDEL
AAREIKDTSGLSPEQVSENVIEGMLASGVLTSIDPQAIVGILVYNRFIRVHPDSRLMIAV
RQGPEYLNKYLDAGKVDELRDVISPPDRSRSNSPTLEGRESSPPIKKSRFDSTRQHNPQV
VYARELLSLKKPFMPCLLSFKSQLIKTENIEEFENPTNSFPKHPPFPQHNQPFPQQPFQQ
PQQVTPNRPSPWAAGFAPSPGPWGPGNVSNQNGFNNNNNMGMGQNSNTFNSNMGSNMNSS
GPNQNGYNNNNSNMSPFNGQPFGGNGNDYGGNFGDNDNNYGDRDFHKNGSMASPGNNNMH
NKNNMNNNNMRRSNIRRGVGGGGSRNRGRNTNRRF
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggatttccaacaaccaccaccttcaattgatgttacacaaccaccaccacaattgact
gcaccgtctgcgttagctactaataccacttccatacctcaaactgcaggaccaccacat
catcgtaactacttccatcaacatcatggaggtacaaataaaccaggtcatgcttatttt
aaaccatttgctccaaaaccgtatggcatgacacaagacgacttcgatggaaaacgttta
cgcaaaagtgttatgcgtaaaacagttgactacaatgcgtccattgttcgagctttggag
acacgtctatggcagcgagattaccgtgaccgacatgcaatggaacctgaaaatatatat
atacccgaattaatgccgccgtccagctatttagataatccatctaatgcagtaactaca
cgatttgtcaaaactgccacgaataaaatgcgttgccctatattcacgttagcttggacg
ccagaaggtagacgcttagtgactggtgcaagttctggcgaatttactctatggaatggt
ttaactttcaactttgaaacaattttacaggctcacgatgtttcggtgcgtactatgatt
tggtcacacaatgatagttggatggttacaggcgatcattctggctatgtgaagtactgg
cagtccaatatgaataacgttaaaatgtttcaagctcacaaggaggcaattaggggaata
agtttcagtcccaacgatagtaagtttgtgagctgcagcgatgacggaacactgagaatt
tgggatttcttacgttgccaagaggaacgtattttaagaggccatggtgctgacgttaaa
tgtgttcactggcatccacaaaaaggtcttattgtttcaggaagtaaagataatcagcag
ccaattaagttatgggacccaaagagtggtagcgccctagcaacattacacgcacataaa
tcaactgtaatggacttgaaatggaatgataatggcaattggctggttaccgcttcgcgt
gatcatttgctcaaactatttgatttgcggaatttacgagaagaagtacagatctttaga
ggtcataaaagagaagccagctctgtttcttggcatcctacgcatgagggactgttttgt
tctggtggctctgatggttcaatactgttttggaatgtgggtaccgataaggaaattggt
agtatagaaactgcacatgacagtattgtgtggaccttggcttggcatcccttaggtcat
atattatgttcaggctctaatgatcacacaattaaattttggacacgtaatcgtcctggt
gatctgatgagagataaatacaatttaaatactctacctgctagcttagcagcattggat
gattgtgaatatgatgatgctgtcatacctggtatgggtcctgaggataaagttgaattt
actgagagccttactgccgataaaggtttcattcccggtcttgatttagatccatcaaaa
atatccgacaaagataaagaaaagaaagttccctacagtaaaccaataccgcataatttt
caagcacaatgggccggcactcgacgtcaggatgaaactggcaacatacatgatgaattg
gctgcacgtgaaataaaagatacaagcggcttatcaccagaacaagttagtgaaaatgtc
atcgaaggtatgttagcaagtggtgtacttacttccatcgatccacaagcaattgttggc
atattagtctacaatcgatttatacgcgttcatccagattcaagacttatgattgcagta
cgtcaaggtcctgagtatcttaataaatatcttgatgccggtaaagtggatgagttaaga
gatgtaatatccccacctgaccgatcacgttcaaattcacctaccttagaaggacgcgaa
agttcaccaccaataaaaaaatcacgttttgatagtactcgtcagcataatccacaagtt
gtatatgcacgtgaactattaagtcttaagaaaccatttatgccttgtctactgtcattt
aaatcacaactaattaaaacagaaaatatcgaagaatttgaaaatccaacaaattcgttc
ccaaaacatccaccatttccgcaacataatcaaccgtttccacagcaaccatttcaacaa
ccacaacaggttacaccaaatagacctagtccatgggcggcaggttttgcgccatcacca
ggtccatggggacctggaaacgtttcaaatcaaaatggttttaataacaacaataatatg
ggcatgggacagaattcaaatacttttaatagtaatatgggttcaaatatgaactcaagt
ggaccaaatcaaaatggctataacaataacaacagtaatatgagcccctttaatggtcaa
ccttttggtggtaatggtaatgattacggtggcaactttggtgataacgataacaattat
ggtgatcgtgattttcacaaaaatggctccatggctagtccaggaaacaacaatatgcat
aataagaataatatgaataataataatatgcgtcgtagtaatattcgtagaggtgtgggg
ggcggtggtagtcgaaatcgtgggcgcaataccaatagacgattttaa
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