Teleopsis dalmanni (Malaysian stalk-eyed fly): 119679326
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Entry
119679326 CDS
T09311
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119679326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tda03019
]
119679326
Messenger RNA biogenesis [BR:
tda03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
119679326
U7-dependent histone pre-mRNA processing factors
119679326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
119679326
NCBI-ProteinID:
XP_037947538
LinkDB
All DBs
Position
2:complement(111318043..111321467)
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AA seq
746 aa
AA seq
DB search
MTSIIKLHTISGAMDESPPCYILQIDEVRILLDCGWDEKFDSNFIKEIKRHVHTIDAVLL
SHPDAYHLGALPYLVGKLGLNCPIYATIPVYKMGQMFMYDLYMSHYNMCDFDLFSLDDVD
AAFDKIIQLKYNQTISLKGKGYGIAITPLPAGHMIGSTIWKILKVGEEDIIYATDFNHKK
ERHLNGCELERLHRPSLLITDAFNAQYQQARRRARDEKLITNIAQTVRNNGNVLISVDTA
GRVLELAHMLETVWRNRETGLMAYTLALLNNVSYNVIEFAKSQIEWMSDKLMKSFEGARN
NPFQFKFIQLCHTYADLSKLPSPKVVLASTPDMESGFSRELLLQWAENSNNSIIITSRTS
PGTFATDLLENTSPGRKIEVDVRRRVELEGPELEEYLRTQGEKVNRLIIKQDEQQESSSD
SDDDIEMSVITGKHDMVIRPESRQHTGFFKSNKRHYAMFPFHEDKIKCDEYGEIINLDDY
RIADSGYEIINDEQNKENLKKEEVKDKYKTNNDIELLEKPTKCISQRKVIQINAQIQRID
FEGRSDGESMLKILSQLRPRRVIIVHGSSDATQAVAKHCQQNIGARVFAPQKGEIVDVTT
ETHIYQVRLTEGLVSQLQFQKGKDAEVAWVDGRIGLRSQVIDSGSNELAIDQNTICEEKM
FTLETLSTDEIPVHNSVLINELKLSDFKQVLLRNNINSEFSGGTLWCNNGTVALRRVDTG
KVTIEGCLSDEYYKIRELLYDQYAIV
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaataataaaactgcacacaatatcaggagcaatggatgaatctccgccttgc
tacattttacaaattgatgaagtccgtatattgttggactgtggttgggatgaaaaattt
gactctaattttattaaagaaattaaaagacatgtgcatactatagatgcagttctactt
tctcatcctgatgcatatcacctgggcgctttgccgtatcttgtgggtaaattgggactt
aattgtcccatatatgcaaccattcctgtatataaaatgggccaaatgtttatgtatgat
ttatatatgtcgcactataatatgtgtgactttgatttattttcgttagatgacgtagat
gctgcatttgataaaataattcaattaaaatataatcaaactatttcactcaaaggtaag
ggttatggcattgcgattacacctctacctgcaggtcatatgataggcagtacgatttgg
aaaattcttaaagtgggagaagaagacataatatatgcaacagacttcaatcacaaaaaa
gaacgacatctaaatggatgtgaacttgaacggttgcatcgtccttcacttttaattaca
gacgcttttaatgctcagtaccaacaagcaaggcgacgcgcacgagatgaaaaacttata
accaatatagcacaaaccgtccgaaataatggcaatgtattaatttccgttgacactgca
ggcagagttttagaacttgcccacatgttggaaactgtttggagaaatagggaaactggt
ttaatggcgtatacattagctcttttgaataatgtaagctataatgttatagagtttgcg
aaatctcagattgagtggatgagtgataaactaatgaagtcgtttgaaggagcacgaaac
aatccatttcaatttaagtttattcagctgtgtcacacatatgctgacctctctaaacta
ccaagtcccaaagtggtattagcaagtacgcctgatatggaaagcggattttctcgagaa
cttttgttacagtgggcggagaactcgaataacagtatcataattacttcaagaacatct
ccgggaaccttcgctacggacttacttgaaaatacatctccaggtcggaaaattgaagta
gatgtaagacgtcgtgtagaactagaaggccctgaattggaagagtatctacgaactcag
ggagaaaaggtaaatcggttaattataaaacaagatgaacaacaagaaagtagctcggat
tcagatgatgatatagaaatgagtgttataactggaaaacatgatatggttattcgtcct
gaaagccgacagcatacaggattttttaaatcaaataaacgtcattatgcaatgtttcca
ttccacgaagataaaataaaatgtgatgaatatggtgaaatcataaatctggatgattac
cgtatagctgacagtggttatgaaattattaacgatgaacagaacaaagaaaatttgaaa
aaagaggaagtaaaggacaaatataaaacaaacaacgatatagaactgctagaaaaacct
acaaagtgtattagtcaacgtaaagttattcaaataaatgctcaaattcagcgaatagac
tttgagggtcggtctgatggtgagtctatgctaaaaattctttcacagttacgacctaga
cgggtaataatagtgcatggttccagtgatgcaactcaagcggtcgccaaacattgtcaa
caaaatatcggtgcacgagtatttgctcctcaaaagggtgaaattgttgatgttacaacg
gagactcacatttaccaagtacgcttaacagaaggattggtttcccaactgcagtttcaa
aaaggaaaagatgccgaagttgcttgggttgacgggcgtataggcttgcggtcacaagtt
atcgatagtggaagcaacgaattggcaattgaccaaaacaccatatgtgaagaaaagatg
tttacattggaaacattatctactgatgaaattcctgttcacaattctgttttaataaat
gaattgaaattatctgattttaaacaggtattgttgcgcaacaatataaattcagaattt
tccggtggtactttatggtgtaataatggaacagtagcccttcgtcgtgttgacactgga
aaagttacaatagaaggctgtttatcagatgaatattataaaattagagaacttctgtat
gatcaatatgcaattgtttaa
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