Teleopsis dalmanni (Malaysian stalk-eyed fly): 119679418
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Entry
119679418 CDS
T09311
Name
(RefSeq) pre-mRNA-processing factor 19-like
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03040
Spliceosome
tda04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119679418
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119679418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tda03041
]
119679418
04121 Ubiquitin system [BR:
tda04121
]
119679418
03400 DNA repair and recombination proteins [BR:
tda03400
]
119679418
Enzymes [BR:
tda01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119679418
Spliceosome [BR:
tda03041
]
Complex B
Other components
Prp19 complex
119679418
Complex C
Prp19-CDC5 complex
119679418
Ubiquitin system [BR:
tda04121
]
Ubiquitin ligases (E3)
U-box type E3
119679418
DNA repair and recombination proteins [BR:
tda03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
119679418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Prp19
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_SCAP
U-box
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Cytochrom_D1
WD40_like
PAS_11
PROPPIN
CoV_NSP15_N
Phyto-Amp
Motif
Other DBs
NCBI-GeneID:
119679418
NCBI-ProteinID:
XP_037947691
LinkDB
All DBs
Position
2:complement(67005615..67013805)
Genome browser
AA seq
507 aa
AA seq
DB search
MALICAITNEVPDTPVLSPISGAVFERRIIEKYILENGCDPITGKEMKAAELIEIKTPPI
VKPKPPSATSIPATLKTMQDEWDALMLHAFTQRQQLQTARQELSHALYQHDAACRVIARL
NKEVAAAREALATLKPQAGIGASTAPTTIPQPAIASEAAGVATHPVEQAGMSAEVIQKLQ
DKATVLTQERKKRGRTVPEDLVTQDQIKSFLTIASHPGLHSASVPGILALDINSSDHSKI
LTGGNDKNATVFNKDTEQVVAILKGHTKKISKVIYHPDEDTVITGSPDMSIRIWHVPTSQ
TQLLLRCHDGPVTGLSLHPTGDYVLSTSSDKHWAFSDIRTGRLLTKVIDTAEVGLTTAQF
HPDGLIFGTGTDDSQVKIWDLKEQSNVANFPGHTGPISAISFSENGYYLATAADDACVKL
WDLRKLKNFKTIQLDDGYEVKDLCFDQSGTYLAIAGTDVRVYMCKQWQDLKIFNEHTALA
TGVRFGKHAQYLASTSMDRTLKLYAIE
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcattgatctgtgcgattacaaatgaagttccagatacaccagttctatctcccatc
tcaggggcggttttcgaaagacgcattatagaaaaatatatattggaaaatggttgtgat
ccaataaccggcaaagaaatgaaagcggcagaattgattgaaataaaaacaccaccaatt
gttaagccaaagccgccaagtgctactagtatccctgctacattgaaaactatgcaagat
gaatgggatgcattaatgctgcatgcattcacacaacgtcagcaattacaaactgcacgt
caagaactttcccatgcactttaccaacatgatgctgcttgcagagttatagcacgtttg
aataaggaagtagcagctgcacgtgaagctttggctacacttaaaccacaagctggtatt
ggtgcatcaacagctccaacaacaataccacaaccagcaattgcatccgaagctgctggt
gttgctacacatccggttgaacaagctggcatgagtgcagaagtcatacaaaaattacaa
gacaaagccacggtattaacacaggaacgtaaaaaacgtggtcgtaccgtacccgaagat
ttagttacgcaagatcaaattaaatcatttttgacaattgcttctcatccaggtttgcac
tcagcatctgtgcctggcattttagctttggatattaatagttctgatcatagtaaaatc
ttaactggaggtaacgataaaaatgctactgtttttaataaggatacggaacaagttgtg
gccatacttaaaggacatactaaaaaaattagtaaagtcatttatcatccagatgaagat
actgttataactggttcgccagatatgtctatacgtatttggcatgtaccaacttcgcag
acacaacttttgctacgttgtcatgatggtccggtgacaggactatcattgcatccaaca
ggagactatgtattatcgacttcttcagataaacactgggccttttcagatatacgtact
ggacgtttgttgactaaagttattgatactgctgaagtgggcttaacaacagcacaattt
caccctgatggcctcatttttggtacgggaaccgatgattcacaagtaaaaatttgggat
ttaaaggaacaaagtaatgttgctaactttcctggacatactggcccaatatcggctata
tcattctctgagaacggttattatttggcaacagctgctgatgatgcttgtgtgaaactc
tgggatttacgtaaattaaaaaatttcaaaactatacaactggatgatggctacgaggtt
aaggacttatgtttcgatcagagtggtacatatcttgctattgccggtacagatgttaga
gtctatatgtgcaaacaatggcaggatttgaaaatcttcaatgagcacaccgcgttagcc
actggtgtacgatttggtaaacatgcgcaatatctagcatcgacaagcatggatcgaaca
ctgaaattatatgccatcgaatga
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