KEGG   Teleopsis dalmanni (Malaysian stalk-eyed fly): 119680337
Entry
119680337         CDS       T09311                                 
Name
(RefSeq) THO complex subunit 3-like
  KO
K12880  THO complex subunit 3
Organism
tda  Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03013  Nucleocytoplasmic transport
tda03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tda00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119680337
  09122 Translation
   03013 Nucleocytoplasmic transport
    119680337
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tda03019]
    119680337
   03041 Spliceosome [BR:tda03041]
    119680337
Messenger RNA biogenesis [BR:tda03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     119680337
Spliceosome [BR:tda03041]
 Complex C
  Other components
   EJC/TREX
    119680337
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    119680337
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 Beta-prop_EML_2 WD40_Prp19 WD40_WDHD1_1st ANAPC4_WD40 WDR55 Beta-prop_WDR19_1st EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_EML eIF2A NBCH_WD40 WDR90_beta-prop_4th RMC1_N PD40 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st B-prop_COPA_B_2nd Beta-prop_DCAF12 Cytochrom_D1 Beta-prop_SCAP Beta-prop_ELP1_1st WD40_like Beta-prop_TEP1_C DPPIV_N
Other DBs
NCBI-GeneID: 119680337
NCBI-ProteinID: XP_037949030
LinkDB
Position
2:210300036..210301483
AA seq 324 aa
MQTSAQISSDIKDLQYFFKRHKIVREQRAHSAKVHSVGWSCEGRRLASGSFDKTVVVYTL
DRDRLAKDTTLRGHTASVDQLCWHAHHPDLLSTASGDKSVRIWDARAGRCSAVVNTKGEN
INITWSPDGKTIAVGNKDDLVTFIDARTNKIKVEKQFNFEVNEIAWNKNNNLFFLTSGTG
SVHVLSYPNLESMEVLRGHPATCICIEFDPTGKYFAVGSADSLVSVWNANELSCQHVIER
LEWPVRTISFSHDGKLIASGSEDLFIDIAYATTGEKVTKVPVDASTFTVAWNPKKYLLAY
ACDDKDNNDRRREAGNLKVYGFEN
NT seq 975 nt   +upstreamnt  +downstreamnt
atgcaaacgagtgcacaaatatcgtcggatataaaagatttgcagtatttctttaaaagg
cataagatcgtacgtgagcagagagcgcattcagcgaaggtgcattcagttggttggagc
tgtgaaggacgtcgtttagcttcaggttcatttgataaaactgttgttgtgtacacatta
gacagagatcgcttggcaaaagataccactttacgtggtcatacagcttctgtagatcag
ctgtgttggcacgcacatcatccagatttgttaagtacagctagtggtgataagtctgta
cgcatatgggacgctagagctggaaggtgttctgctgttgtgaatacaaaaggtgaaaat
attaatataacttggtcaccagatggcaaaacaatagctgttggcaataaggatgattta
gtcacatttatcgatgcacgtacaaataaaataaaagttgagaaacaatttaactttgag
gttaatgaaattgcttggaataaaaacaataatttgttctttttaactagtggtacaggt
agtgtacacgttttgagttatcctaatttagaatcaatggaagtacttcgaggacaccct
gcgacatgcatatgcattgaatttgatcccactggcaaatattttgctgttgggtctgct
gattctttggtttctgtttggaatgcgaatgaattgtcatgtcaacatgtaatcgaacgt
ttggaatggcctgtacgcactatttctttcagtcatgatggcaaattaatagcttctggt
agtgaagatttgtttattgatattgcatatgctacaacgggtgagaaagtaacaaaagta
ccggtagatgcatcaacatttactgtagcttggaatccgaaaaaatacttactagcttat
gcttgtgatgataaagataataatgatcgacgacgtgaggctgggaatttaaaagtatac
gggtttgaaaattaa

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