Teleopsis dalmanni (Malaysian stalk-eyed fly): 119681443
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Entry
119681443 CDS
T09311
Name
(RefSeq) THO complex subunit 6
KO
K13175
THO complex subunit 6
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119681443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tda03019
]
119681443
03041 Spliceosome [BR:
tda03041
]
119681443
Messenger RNA biogenesis [BR:
tda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
119681443
Spliceosome [BR:
tda03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
119681443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
WD40
NBCH_WD40
Beta-prop_DCAF12
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_SCAP
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
119681443
NCBI-ProteinID:
XP_037950565
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All DBs
Position
1:4387999..4389421
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AA seq
344 aa
AA seq
DB search
MNSLKIKKIYNCVLSQVFSTSGQFLFVGNRFGDIFVLDIQKLEQTNLTNKPAEDADVDMK
TFPQGQGRDINSLCFHNNFLIIGTIGNFYGLKWHEEQRHLSSKPHWEVRIPMDADATEVP
DVNYMWIRPETNTLYAGCGDNVVYQISLEDGRVVRDYRGHSDFIHSVSGCGVNTIVSGSE
DGTVCLWNENEKLSTGKIIPAENTELKRPEFGNWIGAVDANNDWVICGGGPRCAIWHLRS
MNTTGSYSFPGKVHLCYFVKDKVLIGGEHYQVQFYQWNGNEEASVTVENIASYTAVWHSN
PYKFMSVAGFSNKLHIVKDFLLDCKIDLYGNVKEEQSTKDEFAF
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgctaaaaataaaaaaaatatataattgtgtactatcgcaagtattttcaaca
tctggacaatttctttttgttggcaatcgctttggcgatatttttgtactggatatacaa
aagctggaacaaactaatttaaccaataaaccagccgaagatgcagatgtcgatatgaag
acgtttcctcaaggtcaagggcgggatatcaacagtctttgtttccataacaacttttta
ataattggcactattggcaatttttatggtctaaaatggcacgaagaacaacgccattta
agtagtaaacctcactgggaggtacgtattcccatggatgcagatgcaaccgaagtccca
gatgttaattacatgtggatacgaccagagacaaatacgctttatgctggttgtggtgat
aatgttgtgtaccaaattagtttggaagacggcagagttgtgcgtgattatcgtggacat
tccgattttatacattctgtaagcggttgtggtgtaaatacgattgtttctggttctgaa
gatggcactgtctgcttatggaacgaaaatgaaaaattatctacaggaaaaataattcca
gctgaaaacactgaattaaaacgaccagaatttggtaactggattggtgccgttgatgct
aataacgattgggtaatttgtggtggtggaccaaggtgcgctatttggcatttacgttcg
atgaatacaactggcagttactcatttcctggcaaagttcatttatgttattttgtgaaa
gataaagtattaattggtggcgaacactaccaagtccaattttatcaatggaacggtaac
gaagaagcaagcgttactgttgaaaatattgcttcatatacagcagtttggcattctaat
ccatataagttcatgtcagtggcaggtttcagtaataaattacatatagtaaaagacttt
ctattggattgtaaaatcgacttatatggcaatgtaaaagaggagcagtcaacaaaggat
gaattcgctttttaa
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