Teleopsis dalmanni (Malaysian stalk-eyed fly): 119681619
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Entry
119681619 CDS
T09311
Name
(RefSeq) general transcription factor IIH subunit 1-like isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03022
Basal transcription factors
tda03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119681619
09124 Replication and repair
03420 Nucleotide excision repair
119681619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tda03021
]
119681619
03400 DNA repair and recombination proteins [BR:
tda03400
]
119681619
Transcription machinery [BR:
tda03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119681619
DNA repair and recombination proteins [BR:
tda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119681619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
DUF3334
FKBP26_C
Motif
Other DBs
NCBI-GeneID:
119681619
NCBI-ProteinID:
XP_037950790
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All DBs
Position
2:56822730..56825484
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AA seq
625 aa
AA seq
DB search
MTNVNFGTLYLLRLSSLQQVKIWNWHTKVNKKKFVEMTTSSEDVLLQMGEVRYKKGDGTL
YVMNERLAWMAENRDTVAVSHRFADIKMQKISPEGKPKVQLQVVLHDGNSSTFHFVNRNG
QQEMLKDRDKVKELLQQLLPNFKRKVDKELEEKNRILSENPKLLQLYKDLVISKVVTSEE
FWANHAKDLEKKTVTVKQDIGVSGAFLVDIKPQTDGCNGLKYNLTADIIQSIFKTYPAVK
KKHQENVPSKLSEPEFWTKFFQSHYFHRDRITAGTKDIFSECGKIDDQMLKSAIQRGPEN
PFLDLKKFEDVPLEEGFGSASVNSSNSSNNIVHQNMIKRFNQHSIMVLKTCTDTNGPSTS
TASINSASTSSAAALEGVSNGINGGTHKSKHKKGNEIILNGHRESENTTEDVLSKRKRVL
EKINYDDLGVPEIAVDGQVSAKNDAFINFSNVERYLHGLVPNNSQQSYDDPRRLEEVQYS
LKRVASTFIAHRSRSLMSPTAAINALGELSPGGAIMRAFQDQSVGQLVPPDFERDLRNIY
LSFQELLRFFWSNFPPNSIEQEEAVVQHHEALQRFKQAKLVPFENRAIRALSPLGSSITQ
HINVMLKSVNTKFAAWQGRKIRKYR
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatgtcaattttggcacattatatttgcttcggttgtcgtcgcttcagcaagta
aagatttggaattggcatacgaaagttaataaaaaaaaatttgttgagatgactactagt
agcgaggatgtgctattgcaaatgggggaagtacgttataaaaaaggcgatgggacatta
tatgtcatgaatgagcggcttgcttggatggcagaaaatcgtgatacggttgcagtctcg
catcggtttgctgatattaagatgcaaaaaatatcacctgagggtaagccaaaagttcaa
ctccaagtggtattgcacgatggcaatagttcaacatttcattttgtgaatcgtaatggt
cagcaggaaatgcttaaagatcgtgataaagtcaaagagttattacagcaactactacca
aatttcaaacgcaaggtcgataaagaactcgaagaaaagaatcgtatattgtctgaaaat
ccaaaactcttacaactttataaagatttagttatatcaaaggttgtaactagtgaggaa
ttttgggcaaatcatgcaaaggatttggaaaagaaaacagtgactgtaaaacaagatata
ggtgtatctggagcatttcttgtcgatattaaacctcaaactgatggctgtaatggactt
aaatacaatttaactgccgatattatacaaagcattttcaaaacatatccagctgttaaa
aagaaacatcaagagaatgtgccttcaaaactaagcgaacctgaattttggacaaaattc
tttcaatcgcactattttcatcgtgatcgtataactgccggcacaaaagatatatttagc
gaatgtggtaaaattgatgatcaaatgcttaaaagtgctattcaacgtggaccggaaaat
cctttcttagatttaaaaaaattcgaagatgtaccattggaagaaggttttggtagtgct
tcggtaaatagcagtaacagtagtaacaatattgtacatcaaaatatgatcaaacgtttc
aatcaacattcaatcatggtactgaaaacatgcactgatacaaacggtcccagtacaagt
actgccagcataaatagtgccagtacaagtagtgcagctgcattagaaggtgtatcaaat
ggcattaatggaggtactcacaagtctaaacataagaaaggtaatgaaattatacttaac
ggccaccgggaatcggaaaacactactgaagatgtactctctaagcgcaaacgagtttta
gaaaaaatcaattatgatgatttaggtgtaccggaaattgccgtagatggtcaagtcagt
gcaaaaaatgatgcatttattaatttttcgaatgtggaacgttacttacatggtttagta
ccaaataatagtcaacaatcgtatgatgacccacgtcgcttagaagaagttcaatatagc
cttaaacgcgtggcatctacttttattgcacatcgcagtaggtctctgatgtccccaact
gctgcgattaatgctttaggtgaacttagtcctggtggagcaataatgcgtgcttttcag
gatcaatcagtcggtcaattagtgccaccagatttcgaaagagatttacgtaatatttac
ttgtctttccaagaattactaagatttttttggtctaatttcccaccaaactctatcgaa
caagaagaagctgtagtacagcatcatgaagcgttgcaacgtttcaaacaggcgaaatta
gtgccatttgagaatcgagcaatacgtgcattgtcgccactgggttcctctattacacaa
catataaacgttatgctgaaatccgtcaatacaaaatttgctgcttggcaaggacgtaaa
atacgaaaatatcggtaa
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